Ictalurus furcatus (blue catfish): 128603072
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Entry
128603072 CDS
T09387
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ifu
Ictalurus furcatus (blue catfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_At5g56370
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
128603072
NCBI-ProteinID:
XP_053473246
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All DBs
Position
27:3034781..3044886
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AA seq
580 aa
AA seq
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MSSALGKDKDCKEKEAKVLTGKERDKEHKALGSLGKDGKEPKTKGKDAKDGKKDAGGAPP
AVAFSVDNTIKRPNPATGMRKKSSNAEVAKELVKCRDENATRLDLSKRSIHLLPSSVKEL
TLLTELYLYSNKLQSLPAELGCLSGLVTLALSENSLTSLPDSLDNLKRLRMLDLRHNKLR
EIPAVVYRLTSLTTLYLRFNRITAVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLIT
LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRS
LAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNM
EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDIC
GLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ
LTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSK
LSIMSIENCPLSQLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgctttaggcaaagacaaagactgcaaagaaaaggaggccaaagtgctcacg
ggtaaggagcgcgacaaggagcacaaggcgctcggcagcctcgggaaggacggcaaggag
cccaaaaccaaagggaaagacgccaaagatgggaagaaggacgcgggaggcgcgccgccg
gctgtcgcgttctccgtggacaacacgataaagcggccgaacccggcaacgggaatgcgc
aagaagtccagcaacgccgaggtggccaaagagctggtgaaatgccgcgacgagaacgcg
acgcgcctggacctgtccaagcgctccatccacctgctcccgtcgtccgtcaaggagctg
actctgctcaccgagctctacctgtacagtaacaagctgcagagcctcccggccgagctg
ggctgcctgtcgggcctggtgacgctggcgttgagcgagaactcgctcaccagcctgccg
gactcgctggacaacctgaagcggctgcgcatgctcgacctgcggcacaacaagctgcgg
gagatcccggccgtggtgtaccgcctcacgtctctcaccacgctgtacctgcgcttcaac
cgcatcaccgccgtcgagaaggacatccgcaacttgagcaagctcaccatgctgagcatc
cgcgagaacaagatcaaacagctgcccgccgagatcggagaactgtgcaacctgatcact
ctggacgtggcccacaatcagctggagcaccttcctaaagagatcggcaactgcacacag
atcaccaacctggacctacagcacaacgagctcctggacctacccgagactatcggcaat
ctgtcgagtataaaccgcttgggtctacggtacaacagactgtcggcgatcccccggtcg
ttagcaaagtgccgggagctggaagagttaaacctcgagaacaacaacatctccgtgctg
cctgagggcctgctctcgagcctggtgaacctgacgagtctgacgctggcacgcaactgt
ttccagtcgtacccggtgggcggcccgtcgcagttctccaccatctactcgctgaacatg
gagcacaaccgtatcaacaagatccccttcggcatcttctctcgcgccaaagtcctcagc
aagctcaacatgaaggacaaccagttgacgtcgctgccgctggactttgggacatggacc
agcatggtggagctgaacctggccaccaaccagctgactaagatccccgaggacatctgc
ggcctcgcttccctcgaggtcctcatattgtccaacaacctactgaagaagttacctcac
ggcatcgggaacttgcggaagctgcgcgagctcgacctggaggagaacaagctggagtcg
ctcccgaacgagatcgcctacctgaaagacctacagaaacttgtgttgaccaataatcag
ctgaccacgttgccgagagggatcggtcacctgaccaacctgactcacctgggactggga
gagaaccttctgcagcacctgcctgaggagatcggcactctggagaacctggaggaactg
tacctgaacgacaaccccaacctgcacggcctgcccttcgagctggcgctgtgcagcaag
ctgtccatcatgagcatcgagaactgccctctgagccagctcccgccgcagatcgttgct
ggcggcccgtccttcatcatccagttcctcaagatgcagggcccgtaccgcgccatggtc
tga
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