Ictalurus furcatus (blue catfish): 128603117
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Entry
128603117 CDS
T09387
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128603117 (chd9)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128603117 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
128603117
NCBI-ProteinID:
XP_053473312
LinkDB
All DBs
Position
27:15346988..15425786
Genome browser
AA seq
2918 aa
AA seq
DB search
MDYFGDPSIFEDCFTSGHVSLADELDLGSEFDPLQLSAVDAEKHPGLVAGSLPSANQHGV
DYRQQMGQFDGMKVQTSMAQSFPTQGGDSSVGGVFMNEQSHFQNPTMNQAPQTNGLYPNN
SPIWGERRANAYHHQRLQHQHQQLQQHQQQRHKQHLRQQPFQEQFQHRQGQQRHQFNQQH
SHLQQGQQVLSQHQLSAQHQMPHQQINPQTLHRHTKSYPHHTNFYYQGNVASHQGHLGVI
NSQGSPFHPGVDPQSKSYLDVPMIAATSQQQSGFEMAQTVQGFRGVPDTTDNNLGYHVQS
SPAAYTLSSCSASMASSYASSQYSFPGQPPPVVTSSHPHSTIPPASEIGTRDSSCLFMAD
PVMEQQQKGSQIQVPQSHPQECPFRTLQPSKPVQDAYGASEMFSEGLSSFSTTNGPFSHE
IENSHRVSSSGFQGLDEVSLLDHQHRGIGAIGERHNILEEELLPELEAFVQEETSGWNDT
GHDEEPRGKTINDSEGEEDVDFKDSLTLRYKAQPPKNTNGSSNQARLLSPPMKSSSSSSS
SSSSSSSSSSSSHSSSSEKRVPKRQQQMEVLSLEDKQQKANRIISEAIARARERGEKNIP
RVMSPESFPSSSQLHKHRAGSSKSRAKKGCKSARIIKSPREKQKSLIKKIVIKIGKKKKR
KTESSDELSDDEPPPRRPSKDDSKRRSNRQIKRKRYAEEQEARLSDEEMKVIAKAKKINA
NTPKEPAVQLFVENPSEEEGAVVDKIMASRVVKKEVSPGVVVEVEEFFVKYKNYSYLHCE
WATEQQLEKDKRIQQKIKRFKMKQAQRAHFFADMEEDPFNPDYVEVDRVLEVSYCEDKDT
GEPVVYYLVKWCSLPYEDSTWELKEDVDQSKIVEFEQLQAVRPDSRRMERPPASHWKKLE
QSREYRNGNSLREYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLDEILSTGIKG
PFLIIAPLSTIANWEREFRTWTHLNVIVYHGSALSRQMLQQYEMYFRDAQGRVLRGVYRF
QAVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMRLEHKVLLTGTPL
QNTVEELFSLLHFLEPSRFPSESTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKK
LAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLVNTMMELRKCCNHPYL
IKGAEEKILEDFREVCSPSALDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVR
CLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKA
VLQSMSGRDNSLGGGGTMQQQLSKKEIEDLLRRGAYGALMDEEDEGAKFCEEDIDQILQR
RTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDLDTVNGRNSLVI
DTPRVRKQTRPFSATKDELAELSEGESSGDDKPKLRRLHDRLNSYGRTECFRVEKNLLVY
GWGRWRDILQHGRFKKQLSERDVEWICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGRT
KELQNHLGLSTPVPRGRKGKKMKTQSSGFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCN
KVLLRVRMLYYLKQELIGSQCQKVLDGVEASEIEIWVPEPDHSELPVMWWDMLADKCLLL
GVYKHGYEKYNTIRADPALCFLERVGRPDDKAIAAEQRANDFMDGDGDDPEYKPAPTLLK
DDMEDDASSPGDLVITDTGGEGMLDVGGSSLGVVTEAYWPSSSALTARLRRLITASQRFT
KSRQILQIHQTQQTSTPDLCPLPPMLTDAINPKMAAKIERQQRWTRREEADFYRVVSTFG
VVFDPELGRFDWTKFRAMARLHKKTDESLHKYLCAFTAMCRRVCRLPPREGDVVDPSLSI
QPITEERASRTLYRVELLRQIREQVLRHPQLFERLALCQPGSDLPVWWEPGAHDRDLLIG
AAKHGVSRTDYHILRDPELSFMTAQRNYSQNKGAPAQSQAQNQSLLLGQTRTPTPLAQSQ
NPGAPPSPLTNSIPREVTPKEELLLVGEEEVGTQTWPSLRPPTPTGVGLKEEKEGENERR
MEAARTKPLAPNPESRKQKKLSKRSRKEARRRSGSDTDSDASSSSSSSSSSSRSSSSSSS
SSRSGSSSSSSSSSCSSGSSSSSSSSSSSEESDGEEVPKNTAVVPGVKGFDEDSIASHST
THDDTQDSHVTNGTTNLSHPFHGGGYMLAASYWPKDRVMINRLDSICQAVLKGKWPVSRR
AYEGSATVSSFYTTKLMDNAASLADDPAASPQGSKVKKHDADREKEFSVKINDQEGSLKL
TFQKQGLPLKRPLDGEEGPLAQQQYLARLQELQSASDSSLTDYTKTQNSYPPGLSGQMRL
NGLVDGQPVIKKRRGRRKNVEGMDHLFLNKNRPTALPDQVPPGWSGVTTPASTPGASQVV
AGPVDTESRVPVINLKDGTRLAGDDAPRRKDLDQWLKEHPGFVADVGAFIPGVNKIQFQD
GRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKIGGAFAPPLKDLCRFLQENPEYG
IPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKAANMANANASAALG
VNPLLSNGLVSGLDLNSLQALQSLQNFQLTAGLMGLQTDPANMAAMLPMMLSGMAGLPNL
LGMSGLLGKQEAASVEDSGKKSGGETTAQTSEIQSERTESPSSTSASASGQALALNPLLL
SSMLYPGMLLNPGLNLPVANQPQATSPQLAPPAQPAPSDAAQKSSGQSEKDAEDDGEEPD
EQKDISGPEGSGKAESSSSDADSSSSSSSDDSDSSDED
NT seq
8757 nt
NT seq
+upstream
nt +downstream
nt
atggactactttggggaccccagcattttcgaggattgttttacctcaggccatgtttcc
ttggcagatgagctggaccttggctcagagtttgaccctctgcagctcagtgcagtggat
gctgagaaacaccctggactggtggcaggttctctgccatctgctaaccagcatggggta
gactaccgtcaacaaatggggcagtttgatgggatgaaagtccagacgtccatggcacag
tcttttcctacccaaggaggagatagcagtgtcggaggcgtgttcatgaacgagcagtcc
cattttcaaaacccaaccatgaatcaagcgcctcagaccaacggactgtatcccaacaac
agtcctatatggggggagcggagagcaaatgcctaccaccatcagcggctgcagcatcag
catcagcagcttcaacagcatcagcagcaacggcataaacaacatctgcgtcaacagcca
tttcaagagcaatttcagcatcgtcaaggccaacaacggcatcagttcaatcagcaacat
tcacaccttcaacagggtcagcaagttttgagccagcatcaactgtcagctcagcaccag
atgccccaccaacaaattaacccccagactttacaccgacatacgaagagctatccgcac
cataccaacttctactaccaaggaaatgtcgcatcccaccaaggtcacctcggtgtgatt
aattcgcagggaagcccttttcatccaggggttgatccacagtctaagtcttaccttgat
gtaccgatgattgccgcaacatctcagcaacaaagtgggtttgagatggctcaaacggta
caagggttccgcggtgttcctgacaccacggacaataatctagggtaccatgtccagtct
tcccctgcagcctataccctgtcttcctgttcagccagtatggcttcgtcttacgcttcc
tctcaatattcctttcctggtcaacctcctcctgtcgtaacttcatcacatcctcacagc
accatcccacctgcttctgaaattggtactcgtgattccagttgcctgttcatggcagat
cctgtaatggaacagcagcaaaaggggagtcagatccaggttccccaaagccatcctcag
gagtgtcctttccgtaccctgcagccttctaagccagtccaggatgcttacggtgcctct
gagatgttctcagaaggtctgtcttctttctctacaacaaacggtcctttctcacacgag
atagaaaacagccaccgtgtcagcagcagtgggtttcagggtctggatgaggtctcgttg
ctagatcatcagcatagaggcattggggcaataggagagagacataatatcctggaagaa
gagctgctgcctgagcttgaagcttttgttcaggaggagacgtccggctggaacgacaca
ggacacgatgaagaacctcgagggaaaacaataaacgattcagaaggggaggaagatgtg
gattttaaggattcactaactttgcggtataaggcacagcctccgaaaaacactaatggt
tcaagcaaccaggcccggctgctcagcccaccgatgaagagcagctcctcttcttcctcc
tcctcctcttcctcgtcttcctcgtcttcgtcctcgcactcgtcctcctcagagaagcgt
gtccccaagcggcagcagcagatggaggtgttgtcgctggaagacaagcagcagaaggcc
aaccgcatcatctctgaggccatcgccagggcacgcgagcggggcgagaagaacatcccg
cgcgtcatgagccccgagagtttccccagctcctcccagctacacaagcacagagcggga
tcctcgaaatccagagcgaagaagggctgcaaaagcgctcgcatcatcaagtctcccaga
gaaaagcagaagagtctgatcaagaaaatagtgataaagatcgggaagaagaagaaacgc
aagacggaatcttcagacgagctctcggatgatgaaccgccgcctcgacgaccctccaaa
gacgactcgaagcgtcggtcgaaccgacagataaagaggaagaggtacgccgaggagcag
gaggcccggctgtctgatgaggaaatgaaggtcatcgccaaagccaagaagatcaatgcg
aacactccgaaagagcctgcggtacagctgtttgtggagaatcccagtgaggaggaagga
gcggtggtggataaaatcatggcctctcgcgtagtgaagaaggaggtgtctccaggggtt
gtggtagaagtggaggagttttttgtcaagtacaaaaactactcttatctgcattgtgag
tgggctacagagcagcagttggagaaggacaagaggatccagcagaaaatcaaacgcttc
aagatgaaacaggcccagagagcgcatttcttcgccgatatggaggaggatccatttaat
cctgattatgtagaagtggacagagtccttgaggtctcgtactgcgaggacaaggacact
ggagagcctgtggtgtattacttggtgaagtggtgttctttgccgtacgaagacagcacg
tgggagctaaaggaagatgtggatcagagtaagatcgtggagtttgagcagctgcaggca
gtgagaccagactccagaagaatggagcgccccccagcgagtcactggaagaagctggag
cagtcgagggagtaccggaacgggaacagtctcagggaataccagctggagggcgttaac
tggctgctcttcaactggtacaacaggcgtaactgtatcttggctgatgagatgggtttg
gggaaaaccatccagtcgatcacgttcctggacgagatcctctccactgggatcaaaggg
ccgttcctgatcatcgccccgctctccactatcgctaactgggagcgcgagttccgcacg
tggactcacctgaacgtcatcgtctatcacggcagcgcgctcagccgccagatgctgcag
caatacgaaatgtacttccgagacgctcagggtcgtgtgctgagaggcgtgtaccggttt
caggcggttatcaccacgttcgagatgattttaggaggctgtccggagctcaacgctatc
gactggcgctgtgtgatcatcgacgaagctcatcgcctgaaaaacaagaactgcaagttg
ctggagggcttcaaactcatgcgtctggagcataaagtgttgttgactggcacaccgctg
cagaacaccgtagaggagctgttcagtctgctgcatttcttagagccctcacggttcccc
tctgaaagcaccttcatgcaggagtttggagacctgaagactgaggaacaggtccagaag
ctgcagggcatactgaagccgatgatgcttcgccgcctgaaggaggacgtcgagaagaag
ctggctccaaaagaggagaccattatcgaggtggagctcaccaacatccagaaaaaatac
taccgtgccattttagagaagaatttctccttcctggccaaaggagccggccaagccaac
gtccccaatctggtcaacaccatgatggagctgaggaaatgctgcaaccacccctacctc
atcaaaggcgcggaggagaagatcctggaggactttcgcgaggtgtgcagcccctcggcc
ctggactttcacctgcaggccatggtgcagtccgccggcaaactcgtcctcatcgacaag
ctgcttcctaaaatgaaggccggcggccacaaagtgctcatcttctctcagatggtgcgc
tgcctcgacatcctcgaagactacctcatccagagacgatacctctacgagcggatcgac
gggcgcgtacgcggaaaccttcgccaggctgcgatagaccgtttcagtaagcccgactcg
gaccgcttcgtcttcctgttgtgcacgagagcaggaggcctgggcattaacctcactgct
gccgatacctgcatcatctttgactcggactggaaccctcagaatgacctgcaggcccag
gctcggtgccacagaatcgggcagaacaaggcggtgaaggtgtaccggctcattacacgc
aactcgtacgagcgggagatgtttgaccgggccagtctgaagcttggattagacaaagct
gtgctgcagagtatgagtgggcgggacaacagtctcggaggaggagggacgatgcagcag
cagctctctaagaaagagatcgaggacctgttgaggcgcggcgcgtacggcgcactcatg
gacgaggaagatgagggtgccaagttctgtgaggaagatatcgaccagatcctgcaacgc
agaaccaaaactatcaccatcgagtcagagggacgggggtctacttttgccaaggccagt
tttgtagcctctgggaatcgcacggacatttctctggacgatcccaacttctgggataaa
tgggcgaagaaggccgagatcgatctggacacggtcaacggcagaaacagcctggtgatc
gacacgccgagggtaaggaaacagacgcggccgttcagtgccactaaagacgaactggct
gaactgtcagagggtgagagcagcggagacgacaagcccaaactgcggcggctgcacgac
cgcctcaacagctacggccgcacagagtgcttcagggtggagaagaacctcttagtgtac
gggtggggccgctggagagacatcctgcagcacggccgctttaagaagcagctgagcgag
agagacgtggagtggatctgcagagcactgctcgcttactgcctagtgcactacagagga
gacgacaagatcaagagcttcatgtgggacctgatcgctccgaccgaggacggcaggacc
aaagaactccagaaccacttgggactctccacgccggttcctcggggcaggaaagggaag
aagatgaagactcagtccagcgggtttgacattcagaaagctgagtggatcaggaagcac
aacccggagcacatgctgtctgatgacggatacaagaagcatctaaagcatcactgtaac
aaggtattgttgagggtgagaatgctgtattacctgaaacaggagctcattggttctcag
tgtcagaaagtgctggatggagttgaagcaagtgagatcgagatctgggttcctgagccg
gatcattcggagctgcctgttatgtggtgggacatgctggcagacaagtgtctgctgtta
ggagtctacaagcatggttatgagaagtacaacactattcgtgcagatcctgctctgtgc
ttcctagagcgggtcggccggccggacgacaaggccatcgctgctgaacagagagcaaat
gactttatggatggggatggtgacgatccggaatacaagcctgcacccactttgcttaaa
gatgatatggaggatgatgcgtcctctcctggtgatctggtcataacggatacaggagga
gaaggcatgctggacgtgggaggcagttctctgggagtcgtcacggaagcatactggccg
tcttcatccgccttaacggctcggctgaggcgcctgatcaccgcatcccagcgcttcacc
aagagcaggcagatcctgcagatccaccagacacagcagacttctacccctgacctttgc
cctctgcctcccatgcttacggatgcgatcaaccccaaaatggctgccaagatcgaacgg
caacaaaggtggacccggagagaggaggcagatttctaccgcgtggtgtctacgttcggc
gtggtgtttgatccggaactgggccgcttcgactggaccaaattcagagccatggctcgg
ctgcacaagaagaccgacgagagtctccacaaatacctctgtgctttcactgccatgtgc
aggcgggtctgccgcctaccaccgagggagggagacgtcgtggatccgtctctgtccatc
cagccgatcacagaagagcgtgcctcacgtacgctgtaccgagtggagctgctccggcag
attcgggaacaggttctgcgccaccctcagctctttgagcgcttggcgctatgccaacct
ggctcagatctgcccgtgtggtgggagccgggcgctcatgaccgcgacttgctaatcggt
gcggctaagcacggagtgagccggacagactaccacatcctccgagaccctgagctgagt
ttcatgacagcccagaggaactacagccaaaacaagggcgcaccggcacaaagccaagcc
caaaatcagtcactgctgcttggacagacacgcaccccgacccctttagcacagagccag
aatcctggagctccgccttcaccactaactaactccatccctagggaggttacacccaag
gaggagctgcttttagtgggagaggaggaggtggggacacagacctggccttccctcagg
cctcccacgcctacaggagtggggttgaaagaagagaaagaaggagaaaatgagagacgg
atggaggccgcacgaaccaagccgctcgcgcccaaccccgagagccgaaagcagaaaaaa
ctgagcaagagaagtcgcaaggaggccaggaggaggtccgggtccgacacggattcagat
gcatcttcctcgagctcctcgtccagctcttcatcgagatcctcgtcttcgtcgtcgtct
tcttcgcggtcagggtccagttcctcgtcctcgtcgtcttcctgctcttccggctcgtcg
tcttcgtcgtcatcgtcctcgtcttctgaagagagcgatggcgaagaggttccaaagaac
actgcagtggtgcctggcgttaaaggctttgacgaggacagcatagcatctcatagcact
actcacgacgacacgcaggacagtcacgtgaccaacggcaccactaacctctcccacccc
ttccacggcggaggctacatgctcgctgcttcttattggccgaaggaccgtgttatgata
aaccgactggacagtatttgtcaggcggtgttgaagggtaagtggcccgtgtctcggcga
gcgtacgagggaagtgctacggtgtcctcgttttacaccactaagctcatggacaacgcc
gccagcttggcagacgaccccgcagcctctcctcagggttcaaaggtgaagaagcatgat
gcagacagagaaaaggagttctcagtcaaaataaatgaccaggaaggcagtctgaaactg
accttccagaagcagggtttgccgttaaagcgccctctagacggcgaggagggacctctg
gcccagcagcagtacctggctagactacaggaactgcagagtgcctctgatagcagcctg
actgactataccaaaacacagaacagctatccacccggcctgagtggacagatgcgactg
aacggactggtcgatggtcagccggtgataaagaagaggagaggaagaaggaagaatgta
gaagggatggatcatctctttctgaacaagaacagacctactgcgttgcctgatcaggtt
cctccaggttggagcggggtcacgaccccagcctcgacccctggcgcctcacaggtcgtt
gccgggcccgtggacaccgagagcagagtccccgtgataaacctcaaagacgggacacgg
ctcgccggggatgacgcccctagacggaaggatctagatcagtggctgaaggagcacccg
ggcttcgtagcagacgtcggagccttcatcccgggggtgaataagatacagtttcaggac
ggacggccgaagcagaagagacatcgctgtagaaatcccaacaagattgacgtcaacagc
ctgacgggagaggaacgagtccaaatcatcaacaggagaaacgctcgcaagatcggcggt
gcgtttgctcctcctctgaaggatttgtgccggttcctccaagagaatccagagtatgga
attcctccagagtgggcagacgtcgtcaaacagtcgggctatctcccggagagcatgttt
gaccgcatcctcacaggtcctatcgtaccggaggaggtgagcagacgagggcgtcggccc
aaaaatgctctggccaaagcggctaatatggctaacgctaacgccagcgcggctctgggt
gtcaaccctctcctgagcaatgggctggtctccggtctggacctgaacagcctgcaggcc
ctgcagagccttcagaacttccagctcaccgcaggactcatgggcctccagactgaccct
gccaacatggccgccatgcttcccatgatgctctccggcatggccggcctgcccaaccta
ctcggaatgagcggcctgctgggaaaacaggaagccgcctctgtcgaggattcagggaag
aaaagcggcggggaaacgacggcacagacgtcagagatccagtcggagaggacagaaagt
ccaagctcaacaagtgcttcagcctcaggccaagcgttagccctcaaccccttactgctc
tccagcatgctttacccagggatgcttctcaacccaggccttaatttacctgtggccaat
cagccacaagctaccagtcctcagctcgcccctccagctcagcccgccccctctgacgcc
gcacagaaaagctcaggccaatccgagaaggacgcggaggacgacggcgaggagcctgac
gaacagaaggacatcagtggtcccgagggctcggggaaggcggagtcatcttcctcagac
gcagacagctcctcatcatcttcgtcagatgactctgattccagcgacgaagactga
DBGET
integrated database retrieval system
