Ictalurus furcatus (blue catfish): 128603157
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Entry
128603157 CDS
T09387
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128603157 (irx5a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128603157 (irx5a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
128603157
NCBI-ProteinID:
XP_053473381
LinkDB
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Position
27:complement(14733180..14745399)
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AA seq
472 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFSSASAA
YSSHLPYGADAAAAAATFTSYVSSPYDHTSGMAGSIGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTP
RNRSEDEEEDENIDLEKNDDDEPNKPIDKGDSTDTETDPKILHVGEAPCDRFQDDHHGKD
SDPLLSDSDLKEVDERADALVDPSKATTSSPSLVQRAHELGVHDRPPEVAHGASAVNHSN
ATSVIHSPPSAPKPKLWSLAEIATSSDRCRGGGGGGGGGDAGGTAQNALPAASAASPSRT
STQCALPSGAVLSRPLYYTSPFYAGYTNYGSFGHLHGSHGSVTSSAATHFNGISPSVLNR
AEALARESKARSQAQVDLCKDSPYELKKALDFSRCFSMVFSRDRLHLPHSAV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcaaccgtccgcctctttggcgctctactcgtgc
ccagcgtacagcacgagcgtgatctcgggcccgcgcaccgaagagctcggtagatcgtcg
tcaggctctgcattcgcaccatacgccggatccacggcgttcagcagcgcctcagccgcc
tacagctcgcatctgccgtacggagcggacgctgcagccgccgcagccactttcacctcc
tacgtgagttccccctatgatcacacgtcaggcatggctggctctatcggttatcaccca
tacgcagctccactgggttcatacccgtatggtgaccctgcgtaccgtaagaacgcgacc
cgggacgccaccgcgactctgaaggcctggctcaacgagcaccgcaagaacccatatcct
accaagggcgagaagataatgctggccatcatcaccaagatgaccctcacccaggtgtcc
acctggttcgccaacgccaggaggagactgaagaaggagaacaagatgacctggacgccg
cgcaacaggagcgaggacgaggaggaggacgagaacatcgacctggagaaaaacgacgac
gacgagcctaacaagcctattgacaagggagactcgacagatacggagacagatcccaaa
attctgcacgtgggtgaggcgccatgcgacagatttcaagacgaccaccacggcaaagac
tcggaccctctgctcagcgactcggacctgaaggaggtggacgagcgcgcggacgcactc
gtggacccgtcaaaagccactacgtcgtcgccgtctctcgtgcagcgggcccacgagctc
ggcgtgcacgacaggccgccggaagtggcgcacggcgcctccgcggtcaatcacagcaac
gccacgtccgttatccattctcctccgtccgcgccaaagcctaaactgtggtctctggcg
gaaatagccacgtcttcggacaggtgcagaggaggaggcggcggtggcggcggcggcgac
gcagggggcacagctcagaacgctctaccggcggccagcgccgcgtctccaagccggacc
tcgacgcagtgcgcgctcccgagcggcgccgtgctctcccggcctctctactacacgtcg
ccgttttacgcgggctacacgaactacggctctttcggccacctgcacggcagccacggc
tccgtcacgagctcggcagcgacgcacttcaacggaataagtccgagcgttttgaaccga
gccgaggctcttgcccgagaaagcaaagcaaggagccaagcgcaggtagacctgtgcaaa
gactccccttatgaactcaagaaagccctggacttcagccgctgtttttctatggttttc
tccagggacagattacacttgcctcattcggctgtctga
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