Ictalurus furcatus (blue catfish): 128603431
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Entry
128603431 CDS
T09387
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128603431 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128603431 (chrne)
Ion channels [BR:
ifu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128603431 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
128603431
NCBI-ProteinID:
XP_053473825
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Position
28:complement(2964912..2974220)
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AA seq
517 aa
AA seq
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MAARSIWTCLVVAALVNTIVQVSGNEESLLMADIFKNYNKNIRPAKHPEDKVDVQVKLTL
TNLISLNEKEETLTTNVWIEIQWHDYRLAWNTSEYYGIDIIRVPSTTVWRPDIVLENNID
GKFDVAYYANVLIYSDGSMYWLPPAIYRSTCSIEITYFPFDWQNCTLVFRSQTYSANEIN
MILAVDGETNKPIEWVDIDPEAFTENGEWAIKHRPARKLTNPRYSPDDLEYQEVYFNLII
QRKPLFYIINIILPCSLISSLVVLAYFMPAKAGGQKITVSISVLLAQTVFLFLIAQKIPE
TSLSVPLIGKYLIFVMSVTTLIVTNCIIVLNYSCRTPSTHSMPRKIKHIFLEVIPRFLGM
TPLVEEGEEAGGMDGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSFVDA
IDVSTTASLYKSLAQAAPEIKECVDACNFIAENTREQNDIGSEMESWVLIGKMIDKVCFW
AAILLFSIGTVAIFLMGHFNQVPEYPFSGENKKYAPE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccggtctatttggacttgtttggttgtggctgcgcttgtgaatacaatagtg
caagtcagtggaaatgaagagtctctgctcatggcagatatttttaagaactacaataag
aacatccggccagcaaagcatcctgaagacaaggtggacgttcaggtcaaactcaccctc
accaacctcatctccctgaacgagaaagaagagacgctgaccaccaatgtatggatcgag
atccaatggcatgactatcgcctggcgtggaacacctcggagtactacggcatcgacatt
atccgtgtaccctccaccactgtgtggcggccagatatagtactggagaacaacattgat
gggaaatttgatgtcgcatactatgctaatgtgctaatctatagtgatggctccatgtac
tggttgcccccagccatctaccgcagcacctgctctatagagatcacctacttcccattc
gactggcagaactgcacgctggtcttcaggtctcagacatacagcgctaacgagatcaac
atgatcttggccgtcgatggcgagaccaacaagcccattgagtgggtggatattgaccct
gaggccttcactgaaaacggtgagtgggctatcaagcatcggccggcacgcaaacttacc
aacccacgctactccccggacgacctggagtaccaggaggtctatttcaacctcattatc
cagaggaaacccctcttctacatcatcaacatcattctgccctgctcgctcatctcctca
ctcgtcgtactggcctacttcatgcctgctaaggcgggaggacagaagataacggtgtcc
atctccgtcctcctggctcagactgtcttcctctttctgatcgctcagaagattccagaa
acatctctgtctgtacctcttattggaaagtacctgatcttcgtcatgtccgtcaccaca
ctcatcgtcacaaactgcatcatcgttctgaactactcatgccggaccccgagcacccac
agcatgcctcgcaaaatcaaacatattttcctggaggtgatccctcggttcctgggtatg
accccactggtggaagagggagaggaagctggagggatggacggagtaagggagaggaga
cgcagctcatttggcctgatgcagcgggcggaggagtacgtgctgaagcagccgaggagc
gagatgatgttcgacaagcagagagagagacatggactcacgcgatcgtttgtggacgct
atagatgtgagcaccacggccagtctgtataagagtttggctcaagcagctccagagatt
aaagagtgtgtggacgcctgcaacttcattgcagaaaacacaagggaacagaacgacatt
ggctctgagatggagagctgggtgttgatcggaaagatgatcgataaagtctgcttctgg
gcagccatcttgcttttttccatcggaacggtggccatcttcctcatgggccatttcaac
caggtcccagagtaccctttctctggggaaaataaaaaatatgctcccgagtaa
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