Ictalurus furcatus (blue catfish): 128603467
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Entry
128603467 CDS
T09387
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128603467 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128603467 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128603467 (ncor1)
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128603467 (ncor1)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
128603467 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Cytomega_UL84
LOB
Motif
Other DBs
NCBI-GeneID:
128603467
NCBI-ProteinID:
XP_053473884
LinkDB
All DBs
Position
28:13919365..14003957
Genome browser
AA seq
2433 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYTFSPARHPPEFTVSEYRNAHLQDQQQRRRPSLL
SEFHPGTERSHTRMHSTLHDPMPPERRHGYEQQFHTVTAQLEHEAMDAKRPRIEGANEAH
LARAPPASVVLPLLNPMQDGLRTPGEIKKENQFSVKLEASSPGGGIQAMGEEQDASPSKL
SKEELIQSMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVSPPPVEHKHRSIV
QIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRR
NHARKQREQKICQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQ
ERFQRVGQRGTGLSATIARSEHEISEIIDGLSEQEIFLDVASETRGSPSQAAGAASTQKA
SQSAKKYLKHCNGNNKNNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDPMKVYKSRQ
FMNVWTEHEKEIFREKFVQHPKNFGLIASYLERKCVSDCVLYYYLTKKSQNYKTLVRRNY
GSRRRRNQQITRTSQEEKSDEKNEEDKLEKSDKKEEDDKKDEEEKDEKEDSKDISKDKEK
CEGEDEEGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASTATEEPAAPAAPPPPPPPP
PEPVLPEPVPPSKPEPAPKPARELAKLAPVTSMDSQARGAVEAGETSRWTEEEMEVAKKG
LVEHGRNWSAIAKMVGTKSEAQCKNFYFNYKRRHNLDDLLPQPKQANKCLRDRDASQSDG
VATASADDDEEEENPDDSEGAENSSDTESAPSPSRSDTPKPSESQPQAPDQEATAPKVPN
ADTKAQEPTFNELQVKLEKSPEGAVVDESMFKDEVQLYPKSEPQDTETVGGDRGEVQVKT
EPELREKEKQNEQQHSDNDSSATCSADEDVEDEPDRQRLFSLEKPSILGGSGSVVVSSSK
QAQLSVQQLQQRAATIPPMVAGPFGTAGVPVGAPLSGLTMFQHQIKAVHESAHMEDNQRQ
EAGELERRPRYITRSPTILDRDGKPFPYMAYDIKLMEPEVPAAGRPGSPYRLSPREPSKA
SPQPEPNNPARYSVPPVLQPAPNQVVQNLPDGMRVPFARHRPPNIPSPPPLIPTSKPSDK
PTFIQGGSILQGTPGTYLPSHTHVMFGPEGAKSAGGSISLGLPRQQDPAKPVSYIKQEEC
SPRGQSAQAEGLLSRAQYEGVVRGGPMPTIQDLGRGPTGKGPEGLPIRAGSITHGTPALP
QSSIPAELLKGKLSAEDLSSPEKGRGEPLPKAHVIYEGKSGHILSYDAIKNTREGTRSPR
TGHELKRTYEMMEGARALSGREAAPFEGLISRALPRDGQHPDSKERPILTGSIMQGTPRT
AADAFDEVKYGKQIKRESPPIRSFEGGITKGKPYEGVNTIKEMGRSIHEIPRKEVPDSRK
TPGLEVSITQGIPLKYESSSSGASQSAIKHNVKSLLTSPGKLEDPKVQERVRHTSVVSAT
SVLRSTHQEASKAQLSPGMYEDANARRTPNYTTGSISRGSPLLRAQEGGITAGKPVSHER
KSTLTPTQRDSVPAKSPVSGGEPLASHSPFDPHQVYRAHLGPHLDPSLFHHPAYMFQRQP
SPTGYPNTYQLYTMENTRQTILNDYITSQKMQPIPRAEVARGLSPREQQIAIPYPAGARG
IIDLAQMPPTILLPHPGGTVSPNLDHIAYLPGPQTPFPPRVFNPASISPGHPAHLAASME
RERERERERERERDREHREREKEKERERERERERERERERMVVANEYIRGAAPEQPGRPS
SRAFLRSPSPSMRSQEGVVQQRPSIFQGTKSVITPLIRQMPPAAAAAQTSSRYNTAADAL
AALVDAAASAPQMDVAKVKEAKHEGISARDEEASPSRAMSLPAGKAPLPGYPDGGGGGAT
SGKDKSRIEEELRTLGKTTITAASFIDVIITRQIASEKDSRERGSQSSDSSGSLTSSRYD
GQSSGAIEVISPASSPAQREEKNERSFSSEKSTQPATGTVRGFDIGRFRHQMESGPSTAP
PPPTQTHRVMTLADHISHIITQDFAKNQDPPPSSSASSSSSSLSSTFQNSAAVGGSARSK
VPNRYSPENPVNPAHHQKQPSRVSPENASDKSRSRPGKSPERAGGRAVESYEPISPPQNY
SGLEKQENSLLQSQRREQDLTEQRTDSRSPGSGNYLPAFFTKLESTSPMVMSKKQEIIRK
SDVGNAQPGTEIFNLPAVTTSSNVNLRNHSFSDPASNLGLEDIIRKALMGSVDERPEEQT
HQAQSVASAAGNNSEGRQEANPSPSTGRYSAKQKLQSKASSRKSKSPNPGQAYAGGERPS
SVSSVHSDGEYHRQAPSWAWEDRPSSAGPMQFPYNPLTMRMLSSTPPTSMACPSPSMQSQ
QQPGGGANAPARAWEREPPLLSEQYETLSDSDD
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctcgggcttcccccccagtcaggggagtttcagcagcgagcagagccgctat
ccaccccactcagtacagtacaccttcagtcctgcacgccatccaccggagttcacagtt
tcagagtaccgtaatgctcacctgcaggaccagcagcagcgtcgcaggccctcattgctg
tccgaattccaccctggaaccgagaggtctcacacacgcatgcactctacattgcatgat
ccaatgcctccggagcgccggcacggctatgagcagcagttccacaccgtcactgcccag
ctggagcacgaggccatggatgccaagcgtcctcgtattgagggcgccaatgaagcccac
ctggcccgtgcaccacccgccagcgtcgtcctgccgctactaaaccccatgcaggacggc
ctgagaaccccaggagagatcaagaaggagaatcagttcagtgtgaagctagaggcctca
tccccaggaggagggattcaggccatgggggaggagcaggacgcgtctccgtccaagctc
tccaaagaggagctaatccagagcatggaccgtgtggaccgtgagattgccaaggttgag
caacagatatttaaactcaagaagaagcagcaacaactggaggaggaagcagcaaagccg
gtggagccggaaaagccagtgtctcctccccccgtggagcacaaacaccgcagcattgtc
cagatcatctacgacgagaaccggaaaaaagcagaggaggcccacaagatcttcgaagga
ctcggccctaaagtagagctgcccctgtataaccagccgtcagacactaaagtgtaccac
gacaacattaagacaaatcaagtgatgaggaagaagctgattctgtttttcaagaggagg
aaccacgcacgcaaacagcgggaacagaaaatctgccagcgctacgaccagctgatggag
gcgtgggagaagaaggtggagcggatggagaacaacccacggcgcaaggccaaggagagt
cgcacgcgcgagtactacgagcgccaattccccgagatccgcaagcagcgcgaacagcag
gagcgcttccaaagggtgggacagagaggcacggggctgtctgccaccatagctaggagc
gagcacgagatctcggaaatcatagacggcctctcggaacaagagattttcttagatgtg
gcctcggagactcgtgggagtccgtcacaggctgcaggagcagcgtctacccagaaagct
tcacagtcagcaaaaaaatacttgaagcactgtaacggaaacaataaaaacaacgagaag
cagatgaggcagctatccgtcatccctcccatgatgtatgactcggagcagaggcgcgtg
aagttcatcaacatgaacggactcatggacgaccccatgaaggtctacaagtctcggcag
ttcatgaacgtctggaccgagcacgagaaggagatttttcgggagaagtttgtgcagcac
ccaaagaactttggccttattgcctcttatcttgaacgaaagtgtgtctcagattgtgta
ctgtattactacttgaccaagaagagccagaactataagacactggttcgacgcaactat
ggcagccgacgacggaggaaccagcagataacgcggacctcacaagaagaaaagtccgac
gagaagaacgaggaggacaagttggagaaatcagacaagaaagaggaagacgataagaag
gacgaggaggagaaagatgaaaaagaggactcgaaggacattagcaaagacaaagagaag
tgtgagggagaggacgaggaggggaaggagcagaacacgccccgcggtcgcaagacggct
aacagccagggacggcgtaagggccgaatcaccacgcgctccatggccaacgaggctgct
agtactgccacagaggaaccagcagcaccagcagcacccccgccaccaccaccaccacca
cctgaacctgttttaccggagcctgtccctccttccaagccagagccagcgccgaagcca
gcacgcgaactcgctaagcttgctcctgtgaccagcatggacagccaagcacgaggagct
gtagaggccggagagacgtctcgctggacagaggaggagatggaggtggccaaaaaagga
ctggtagagcacggcaggaactggtcggctattgctaaaatggtgggcaccaagagtgag
gcgcagtgcaagaacttctacttcaactacaagagacggcacaacctggacgacctgctg
cctcaacccaaacaggcaaacaaatgtttgcgtgaccgagatgcgtctcagagcgacggt
gtggccacggcttcagctgatgatgatgaggaggaggagaacccagatgacagcgaaggt
gcagagaacagttcagacaccgagagcgcgccatctccttcacggtcggacacacccaag
ccctccgagtcgcaaccccaagccccggatcaagaagctactgcccccaaagtccctaat
gcagataccaaagctcaggagcccaccttcaacgagctgcaggtaaagctggagaaaagt
ccagaaggagcagtggtggacgaatccatgtttaaggatgaggtccagctgtaccctaag
agtgaacctcaggacacagaaacagtgggaggagaccggggagaggtgcaagtaaagacc
gagccagaattgagggagaaagagaagcagaatgagcagcagcattcggacaacgactcg
agtgccacctgcagtgctgatgaagatgtcgaggacgagccagacagacagaggttgttc
tctctggagaagccgtcgattctcggaggctctgggtcagtggtggtctcctcgagcaag
caggctcagctcagtgtgcagcagctccagcagcgtgctgccaccatcccccccatggtt
gctggtccgtttgggacagccggggttcctgtaggagctcctctgagcggcttaaccatg
ttccagcaccaaatcaaagctgtacacgaatcggcacacatggaggacaaccagagacaa
gaagccggagagttggagcgcaggccgcgctacatcactcgcagccccaccatcctcgac
cgagatggtaagccgtttccctacatggcgtacgatataaagctgatggagccagaggtt
cctgctgcaggaagaccgggttcaccgtacagactgtctccccgagagcctagcaaagcg
tcgccccaacccgagcccaacaaccccgcccgctacagcgtcccgccagtcctgcagccc
gcgcctaaccaggtggtccagaaccttcctgatggaatgcgtgtgccattcgcccgccac
aggccccccaacattccgtccccgcctccactcatccctacgtccaaaccctcggacaag
cccaccttcatccagggaggatccattttacagggaacgccaggcacgtatctgccctca
cacactcatgtcatgttcgggccagagggagctaagagcgctggtggatccatctctctc
ggcctgccaagacaacaggaccctgccaaacctgtgtcctatataaagcaggaggaatgt
tcaccgcgtgggcaaagtgctcaggctgaagggctgctctccagggcacagtatgaagga
gtagtccgaggagggccgatgcctaccatccaggacctgggaagagggcctactggaaaa
ggccctgagggacttcccataagagcaggatcaatcacccatggcaccccagctcttcct
cagtccagcataccggcagaattgctgaagggcaagctgagtgctgaggacctgagtagc
ccagagaagggccgaggcgaaccactgcctaaagcccatgtcatttatgagggcaagagt
ggccacatcctgtcatatgatgccattaagaacaccagagaaggtacaagaagccccagg
acaggacatgagttgaaacgcacatacgagatgatggagggagccagagcactttctgga
cgggaggctgcaccttttgaaggtttgattagcagggcgctgccaagagatggccaacac
cctgactccaaggagaggcccatactcacgggatccatcatgcaagggacaccccgaacc
gccgctgatgcttttgacgaggtcaagtatggtaagcagatcaagagggaaagtccacca
attcgctcctttgaaggaggaatcactaagggcaagccctacgagggtgtgaacaccatt
aaagagatgggacgctccattcatgagatcccccgcaaggaagtaccggacagccgcaag
acccctggcttggaagtatccattactcaaggcatccctctgaagtatgagagcagcagc
agtggcgccagccagtctgccatcaagcacaatgttaagtcacttctcaccagcccgggc
aagctggaggaccccaaagtacaagagcgcgtgcggcacacgtcagtcgtcagcgccacg
tcagtgctgcgctccacacaccaggaggccagcaaggctcagctcagcccggggatgtac
gaggacgcgaatgcccgcaggacccccaactacaccaccggctccatctccagaggatcg
cccctgcttcgggcgcaagaggggggtataactgcaggaaagcccgtgtcccacgagaga
aagagcacgctgaccccaacccagagagacagcgtcccagccaagtctcctgtatctgga
ggcgagccgctggcctctcacagcccctttgacccccatcaggtgtaccgagcccacctg
ggccctcatttggaccccagccttttccaccacccagcttacatgttccaaaggcagcca
tccccaactggctaccccaacacctaccaactatacaccatggagaacacgcgccagaca
atcctgaatgactacatcacttcgcagaaaatgcagcccatcccgcgggccgaagtcgcc
agaggcctgtcgcccagagaacagcagattgccatcccataccctgctggagccagaggt
ataattgatctagcccagatgcctcccaccatcctgttgcctcaccctggggggacagtt
tcccctaacttggaccacatcgcatacctccctggacctcagaccccttttcctcctagg
gttttcaacccagcctccatatctccaggacaccctgcacatctcgcagccagcatggag
agagagagagaaagggaaagggaacgagagagggagagggatcgcgaacaccgagaacgg
gagaaagagaaggagcgagagagggagagagagcgggagcgagagagagaacgcgagcgc
atggtagtcgctaacgagtacatccgtggggcagctccagagcagcctggcaggcccagt
agccgtgctttcctgcgttccccgtctccttcaatgaggtcccaggagggtgtagtccag
cagaggcccagcatcttccagggcacgaagagtgtcatcacgcctcttatcaggcagatg
ccccccgcagcagccgcagcacagacttcctcccgctacaacacagccgcagatgcattg
gctgcactggtggatgctgccgcctctgcaccccagatggacgtagcgaaggtcaaagag
gctaaacacgagggcatcagcgcccgtgacgaagaggcgagcccctcacgagccatgtca
cttcctgctgggaaagcaccccttcctggatatccagacggaggaggaggaggggcaaca
agcggcaaagataagtcccgcatagaggaagagctgcgcacgctcggcaagaccaccatc
accgcggccagcttcatcgacgtcatcatcactcgtcaaattgcatcagaaaaagactcg
cgcgagaggggctcacagagctcggactcctcgggaagtttgacatcgagccgttatgat
ggacagagcagcggcgccatcgaggtgatcagtccggcaagttccccggctcagagagag
gagaaaaacgaacggtccttctcctcagagaagagcactcagccggctacaggtactgtt
agaggatttgatattgggcgcttcaggcatcagatggaatcgggaccctcaacagctcca
cctccacctacacaaactcaccgtgtcatgaccctggctgaccacatctcgcacatcata
acccaggactttgccaagaatcaggaccctcctccttcatccagcgcttcttcctcctct
tcctccttatcctctacattccaaaactctgcagcagtaggtggaagcgctcgctccaaa
gtgcctaaccgctacagtccggagaacccagtcaaccccgcccaccatcagaaacaacct
agccgagtgtcccctgagaacgcctcggacaaatccagatccaggccgggtaaatcccct
gagcgtgctggcggccgggccgtcgagagctacgagcccatctcccctccacaaaactat
tcagggctagagaaacaagagaacagtctgcttcagagccagaggcgtgaacaggatctt
acagagcaaagaacggactcgcgctccccgggcagcggcaactatctgccagctttcttc
accaagctggagagcacctcccccatggtgatgtccaagaaacaggagatcatccgcaaa
tctgatgtcggtaatgcacagccaggcacagagatctttaatttaccagcagtaacaacc
tcaagtaatgtgaaccttcggaaccactcattcagcgacccagccagcaaccttggtcta
gaggacataatccgtaaggctctgatggggtctgtagatgagagaccagaggagcagaca
catcaagctcaatctgtagcttcagcagcaggaaataactctgaggggcgacaggaggcc
aacccgtcccccagcacaggtagatattcagcgaagcagaagctccagagcaaagccagc
agcaggaagtccaagtcgcccaacccaggccaggcgtacgcaggcggagagcgaccctcc
tccgtgtcctctgtacattcggacggagaatatcaccggcaggctcccagctgggcttgg
gaagaccggccctcatccgcaggtccaatgcagttcccttacaaccctctaacgatgcgc
atgctgagcagcacgcctcccacctccatggcctgcccttctccctccatgcagtcccag
cagcagccaggaggaggagccaacgctccggcccgtgcctgggagagggagccgccgctg
ctctcggagcagtacgaaaccctctcggacagcgacgactga
DBGET
integrated database retrieval system
