Ictalurus furcatus (blue catfish): 128603486
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Entry
128603486 CDS
T09387
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128603486 (zc3h12b)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128603486 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
128603486
NCBI-ProteinID:
XP_053473938
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All DBs
Position
28:complement(838801..852945)
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AA seq
982 aa
AA seq
DB search
MVLELAAPASAGPLLQRSIPHIERVFRVRVSCSAADTHTHTHTRAHTATGTHTDTGTDTD
PDPRSDPETGGGVVVIIQDGTEEDCSRAKDYIVCLISPALRHHERLTLWLQRRLREPESS
EAREHVPELMEDEEGEEEGSSSESEGERRSAGRGHGGGEGGRRKTELMMATKPHRQLCRS
PCLDRPSFSQSSTLQELRAEDSPVTPTSSSLALPTPSVGHAPSDRDYQSKMEFALKLGYS
GEQVEAVLSKLGPSALTNDVLAELVRLGNKGEIEAQTQTQTSTGLTPTGLTLTPRGSGAK
EAVSPEASLEEETNDTYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFLERGHKDI
TVFVPAWRKEQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACD
SDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKR
PVVPEHKKQPCPYGKKCTYGHKCKYYHPERAAQPIRSVADELRAFAKLSAVKTMSEGALV
KCGTSGTTAKGDCSEVKRVAPKRQSDPSIRSVGCEQEERLCPARKAEASSVPSLVTALSV
PTMPPTKSHAAGALNTRSASSPVPGSLHFTHSSLEHAGSIQYPPILVTNSQGASVAYSEP
FPKYDSVVSDHGYYSMLSDFSTMSLGSMQDSFCSLEQPDPVGVGGGYPGRASSICPESGR
SHSSDSFSSYGGEMYSMEGSLDDGMKGPQSAQSQVQSQAQSRLQAFAHGFHHEALTRVQS
YGTDEPKPGPRKQSSAHLVPHAQHQVVGARSSCPGDYPPLPQNVLPSSGPAQPGRSLGMT
RMDSISDSRLYESNPLRQRRPPLCREQHASWDPLPCGNEPYGYGGYGLTGGLMPCCERVM
VRSMPEKMEQIWRSPWDMPSGPHGPMEPQERHPIPEHQYQTYRNLCNIFPAYVVHSVMEK
NPHMTDPQQLAAVIVTKLRSCH
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctggcagcgcccgcaagtgcaggcccgctgctgcagcgctccatcccg
cacatcgagcgtgttttccgggtcagggtgagctgcagcgccgccgacacccacacacac
acccacacacgcgcacacaccgccaccgggacacacaccgacaccggcaccgacaccgat
cccgaccccaggagcgacccggagaccggcggcggagtggtcgtgatcatccaggatggc
acggaggaagactgcagcagggctaaagactacatcgtgtgtctgatctctccggcactg
aggcatcatgagcgtttgaccctgtggctccagcgtcgtcttcgtgagcctgagagctcc
gaggcccgagagcatgtgcctgagctgatggaggacgaggaaggagaggaagaagggagt
agctcggagagcgaaggagagagacggagtgcaggaagaggacacggaggaggagaagga
ggaaggaggaaaaccgagctgatgatggcgactaagcctcaccgccagctgtgtcgctct
ccgtgtctggaccgtccgagtttcagccagagcagcacgctacaggaactgcgcgctgaa
gactctccggtcactcccacttcctcatcactggcactgcccactccctcagtgggccac
gccccttcagatcgggactaccagagcaaaatggagtttgcgctgaaactaggctactct
ggcgagcaggtggaggccgtgctgagcaaactgggaccgagtgcgctcactaacgacgtc
ctggccgaactcgtgcgtctcgggaataaaggagaaatcgaagcacaaacgcagacgcaa
acgtccaccggattaacgccgaccgggttaacgctaaccccacgcggctctggagcgaaa
gaagccgtgagtcctgaggcttcactcgaggaggagacaaacgacacgtacgataacctc
cgacccatcgttatagacggatccaacgtggccatgagccatggaaacaaagaggttttc
tcatgcctgggcatccagttggcggttgactggttcctggagcgaggacacaaagacatc
acagtgtttgtaccggcatggaggaaagagcagtcccgacccgacgctcctataacagat
caggaaatcctgaggaagctggagaaagaaaaaatccttgtcttcactccttcccgtcga
gtccagggacgacgtgtcgtctgttacgacgatcggtttattgttaaattggcatgcgat
tcagacggcatcatcgtgtccaacgacaactatcgagatctgcagaatgaaaagccagag
tggaaaaagttcatcgaggaacggcttctcatgtacagttttgtcaatgacaagtttatg
ccaccggatgacccactaggccgacatggcccaagcctggaaaactttctccgcaagcgg
cctgtcgtgccagagcacaaaaagcaaccgtgtccttatggtaagaagtgcacgtatggt
cacaagtgcaagtactaccacccggagagagcagcgcagcctatccgatctgtcgcagac
gaactcagagcttttgccaagctgtctgccgtcaagaccatgagtgaaggtgctcttgta
aaatgtggcacttctggcaccactgcaaaaggggactgttctgaggtgaaacgtgtggcg
ccgaaacgtcagtcggacccgagcattcgttcagtgggctgcgagcaggaggagcgactc
tgcccggctcggaaagccgaagctagttcggttccatctttagtgacggctcttagcgtc
ccgaccatgccgccgacaaaaagtcacgcagccggggcattgaacactcgttctgctagt
agccctgtaccggggtcgcttcacttcacacacagctcgctagaacacgccggaagcatc
caataccctccgatcttggtcaccaacagccagggtgcatccgtggcatacagtgaacct
tttcccaaatacgattccgtagttagtgaccatggctactattcaatgctgagcgatttc
tccaccatgagcttaggaagcatgcaagacagcttctgtagcttagaacagccggatccg
gtcggagtcggaggaggatatcctggtcgagcttccagcatttgtcctgaatctggacgc
agccactcttcggactcgttctcctcttacggtggagagatgtactccatggaaggtagc
ttggatgatgggatgaagggtccacaatctgcacaatcccaagtgcaatcccaagcacag
tcccgcttgcaagcatttgcacatgggttccaccatgaggctttgacgagagtccaaagt
tatggcacggatgaacccaaaccgggaccacgcaaacaatcctcggcccacctcgtgcct
cacgcgcagcatcaggtggttggagctcgatccagttgcccgggtgactatcctccgctt
ccccagaacgtgttgccttcgtctggccctgctcagccgggcagatccttgggaatgaca
cgaatggacagcatttcagattcccgtctttacgaaagtaacccccttcggcagcgtcgg
ccccctctgtgtcgagagcaacatgccagctgggatcctttgccgtgtgggaatgagcct
tacgggtacggaggttacggcttgacgggaggactcatgccttgttgcgaacgagtcatg
gttcggagtatgccagaaaagatggaacagatttggaggtcaccatgggatatgccatca
ggacctcacggaccgatggaaccacaagagcgacatccgatccctgaacatcagtaccag
acttaccgaaacctctgcaatatcttcccagcatacgtagtccactcggtcatggagaag
aatcctcatatgacggatcctcagcagctagctgcagttattgtaacgaaactacggtcc
tgtcattga
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