Ictalurus furcatus (blue catfish): 128603544
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Entry
128603544 CDS
T09387
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128603544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128603544
03036 Chromosome and associated proteins [BR:
ifu03036
]
128603544
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128603544
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128603544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
128603544
NCBI-ProteinID:
XP_053474027
LinkDB
All DBs
Position
28:complement(1261705..1283322)
Genome browser
AA seq
1829 aa
AA seq
DB search
MAFRRSRTAGKLPEPVAGGSSRSGGGKLGLLINKLHTFLAVSAEQGGEHGLPGHWSGAMA
KEFIEQQQAVARASEECMQPNVSSETKTSAARSRRKPLVVTKHSGMNESDASSESGTEDA
LSVNSSEPDTTSLPKGTVFVLPEPVSNEVRDEFRGPEFRSKRVKQNKDFSDKRRGGSDIE
RVNCTACGQQVNHFQRDSVYQHPALKVLICKSCFKYYMSDDISKDAEGMDEQCRWCAEGG
SLIGCDYCSNAFCKKCVLRNLGRRELSAILEEERKWYCYVCSPEPLMGLVLACDSVLQNL
EKIWARKRVGVGGGARGKQRGGRGGCAGTGSPLGAAPSRGLCDRMQRVVDMTTSLNRSFV
EFMQSERDEEASEEEDVDRARRLSMFRTILQDLCQAHTALQEALDRELYGGKREPQRQRA
KPRQRKPRAPRGSGVTKELVVKLTPVPLEVSVNPDASADASSAGVAAVDTAEVNAQIKEE
EKQETAEKTEGRADGKKAEEEVKCEVKGGVAPEEEHTDDDGDDEEDEGDEPEMAEENKRS
PRVKTTPRRRRSDAAHAGLEEDSDSDEVPAVLLQTAAATAAMATSEEEGGVDSDGGDPDA
NQEVRKQCLFGLVKTTPPCQDRTPRKRKLKDRSSSSSSSSSSSSSAAEVADPGSKVRRTV
GLTHKVAKMTADSASSSSDQEMDSSDSDELEQKIKPLSDVTLMGSGPFQQSSGDEVDVCP
APIVLDEDDVENRIAKQILLAEIRANLSSSSGQDDSSDDWGSRDEDEEEEEEGMTERESK
RKDDAEDSEPTDNSSDSDDPATPAQSRHHLLRCRVTPWETASKDEDDDKPADQETGRKAA
AINKLTDVCSSDDRESASEESALSEVISQSEDEDGGGVTQKDSEVDGEPHTPPGEGGEDG
EDGENMEELMSTPKGRRKIRRILEVQQLAKETQEALREEEERRQRLAERDRQRRQEEEES
REQGRDDSEVMIVAETPASRPVPLVLELDDATRECLVEVDTHLLRKLKPHQREGVQFIWD
SCCESIAKVKSSPGSGCLLAHCMGLGKTLQVITFLHTVLTCELVALKTALVVCPLNTVLN
WRAEFDKWQRGITKKKVEVTELATVKSVGSRVNALTSWHRRGGVMIMSYEMYRILTHGGQ
AKYGNEQRNLRAVLQDPGPDIVVCDEGHVLKNDATAICKAMRSIRTRRRIVLTGTPLQNN
LTEYHCMVSFVKQNLLGSLREFRNRFMNPIQNGQCADSTPSDVRLMKKRVHVLHELLAGC
VQRRDYSVLTPFLPPKREYVLLIRMTTLQCQLYRHYLQNYTAKGGGVNRLFQDFQILSLI
WTHPWCLQLSDHNRGNKGKGEEPASETMATVVRSNVANGQSTNERVLEESRDLNSAKTTP
DEERSMLSGPPAGWYREFVSNADAELLEHSGKLMLLVEILHCAELQQDKVLVFSQSLVSL
DLIETFLGLADKAKKEGKASVYKGKQSWVRDKDYYRLDGSTTATARKKWAQEFNNVRNTR
CRLFLISTRAGSLGINLIAANRVVVFDASWNPTYDVQSMFRVYRFGQKKAVYVYRFLAQG
TMEQKIYERQVAKQSLSSRVVDQQQIQRHFTHSHLSDLYRFQPDIHSKSHAVEPTDKVLA
VLLQHCGRSIVSFHEHDSLLDHRVEEELSMEERKEAWEEYRLEETTQTHTRASVLDLGEL
RRKSNNELEDMLKKGRLELQRASHNIKAQSLEFFQQEVMKRYPLLDEEKMKLKASQSYEH
YERERARWMEIYQCKLAGQQKLIQYTQQILAKRAAHSSRAPPTTSTPLKSRFEAGDSYSA
PPLQPAPPLQPAPPHPSRETDRTAGSLSH
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccggagatcccgtactgctggaaaattgcccgagcccgtggccgggggcagc
agcaggagcggcgggggtaaactaggactcctgatcaataagctgcacacattcctggcg
gtttctgcggagcagggcggcgaacacggcttacccgggcactggagcggtgcgatggcc
aaagagtttattgagcagcagcaagctgtagcacgcgcctccgaggagtgcatgcagccc
aacgtgtcctcggagacgaagacctcggcggctcgttccaggaggaagccgttggtggtg
acaaagcacagcggcatgaacgagtcggacgcgtcgtccgagagcggaaccgaagacgcg
ctgtccgtcaactccagcgaaccggatacgacctccctgcctaaaggtacggtgtttgtg
ttgccggagccggtgtctaacgaagtccgtgacgagttcagaggtccggaatttcgcagc
aaacgagtgaaacagaacaaagacttctcggacaaacggagaggaggctctgacatcgag
cgagtgaactgtacggcctgcggtcagcaagtgaaccatttccagagggactctgtctac
cagcaccctgcactcaaagtgctcatctgcaagtcctgttttaagtactacatgagcgac
gacatcagcaaagacgccgagggcatggacgagcagtgcaggtggtgcgcggaaggaggc
agtctgattggctgcgactactgcagcaacgctttctgcaagaagtgtgtgctgcggaac
ctcgggcggcgggagctgtcggccatcttggaggaggagcgcaagtggtactgttacgtg
tgcagcccggagccactcatgggcctggtgctggcctgcgactcggtgctccagaacctg
gagaagatctgggctcgcaagcgggtcggtgtagggggcggggcccgtgggaagcagagg
ggcgggcgcggcgggtgtgcggggacggggtctcctctcggtgcggcgccctcccggggt
ctgtgcgatcgcatgcagcgcgtggtggacatgaccacatcgctgaaccgctcgttcgtg
gagttcatgcagagcgagagggacgaggaagcgagcgaagaggaagacgtggaccgagcg
cggcggctgagcatgttccgcaccatcctgcaggacctgtgccaggcacacaccgccctg
caggaagcgctggatcgggagttgtacgggggcaaacgtgagcctcaaaggcagcgcgcg
aaacctcggcagcggaaacctcgggctccgagaggctcgggcgtcaccaaggaactggtg
gtgaagctgacgcccgtcccactagaggtgtctgtcaatcctgatgcctccgccgatgct
tcttccgccggcgtcgctgctgtagatacggcggaggtaaacgcacaaataaaggaggag
gagaaacaggaaacggcggagaagaccgaaggaagggctgacggaaagaaggcggaagag
gaagtgaagtgcgaggtgaaaggaggcgtggcgccggaggaggaacacacagacgacgat
ggagatgacgaagaagatgaaggcgatgagccggagatggcggaggagaacaagcgctct
cctcgcgtcaagacgacgcctcggcgacggcgctcggacgctgcgcacgccggcctggag
gaggactctgactcggatgaagtgcccgccgtgctgctgcagaccgccgccgccacagcc
gccatggccaccagcgaggaggagggcggggtcgacagcgacgggggtgaccccgacgca
aaccaggaagtccgaaagcagtgcctctttggcctggtcaaaaccactcccccttgccaa
gatcgaactccacgcaagcggaaacttaaagacaggtcctcttcttcatcctcctcttcc
tcctcgtcctcttcagccgccgaagtagcagatcccgggtcgaaggtccggcggacagta
ggacttacccacaaggtcgccaagatgacggcagacagcgcaagctcgtcgagcgatcag
gaaatggacagcagtgactcggatgagttggagcagaagattaaaccgctgagtgatgtc
acgctgatgggatccggaccgttccagcaatcctctggtgacgaagtggatgtgtgcccc
gccccgatcgtgttggatgaggatgatgtggagaatagaattgctaaacagatcctgttg
gccgagatcagagccaacttatcgtccagctccggtcaggacgactcctcggacgactgg
ggatccagggatgaggatgaggaggaagaggaagagggcatgacggagagggagagcaag
aggaaggatgacgctgaagacagtgagccgaccgataacagctccgactcggacgatccc
gctacaccggcacagtcccgtcaccacctgctgcgctgccgcgtgaccccgtgggagacc
gcgtctaaagacgaggatgacgataaacctgctgatcaggagaccggaaggaaggcggcc
gcgataaacaagctaacagacgtttgcagcagcgacgacagagaatctgctagcgaggag
tcggcgctgagcgaggtgatcagccaatcggaagacgaggacggcggcggcgtgacgcag
aaggattctgaggttgacggggaacctcacacacctcctggagagggcggggaggacggg
gaagacggggaaaacatggaggagcttatgagcacgccgaagggccgcaggaagatccgg
aggattctggaggtgcagcagctggcgaaggagacgcaggaggcgctgagggaggaggag
gagaggaggcagaggctggctgagagagacagacagcgacggcaggaggaggaggagagc
agagagcaaggacgagacgactcggaggtgatgatagtagccgagaccccggcctccaga
cccgttcctctggtgctagaacttgatgatgcaacacgggaatgtctggtggaggtggat
acacacctgctgagaaaactcaaacctcaccaacgagagggtgtgcagttcatttgggac
agctgttgtgagtccatagcaaaggtgaagtcctctcctggttccggctgccttctcgcc
cactgcatgggcctcggaaagacgctacaggtgatcacgtttctgcacacggtgttgacg
tgcgagctggtggcgctgaagacggcgctggtggtgtgtcctctaaacacagtgctgaac
tggagggcggagttcgacaaatggcagcgtggcatcaccaaaaagaaagttgaggtgacg
gagttggcaacggtgaagtcagtgggttctcgtgtgaacgctctgaccagttggcacagg
agaggtggtgtgatgattatgagttacgaaatgtaccgcattctcacacacggaggtcaa
gccaaatatggcaacgagcagaggaacctacgcgctgtgctgcaggaccccggccccgac
atagtggtgtgtgatgaaggccatgtcctgaaaaacgatgcgactgccatctgtaaagct
atgcgctccatacgcacacgccggcgaatcgttttgacaggaaccccgcttcagaacaat
ctcactgagtatcactgcatggtgagttttgtgaagcagaacctcttgggttccctgcgt
gagtttcggaaccgtttcatgaaccccatccagaacggccagtgcgccgactccacaccg
tccgacgtgaggttgatgaagaaacgagtacacgtcctccacgaactcctcgctggatgt
gttcagaggcgggattattccgttctgacgcctttcctgccacccaagagagagtacgtg
ctgttgatcaggatgaccacactacagtgtcaactgtacagacactacctacagaactac
actgctaaaggagggggtgtgaacagattatttcaggattttcagatcctgagtcttata
tggacgcatccgtggtgcctgcagctttctgaccataatagagggaacaagggcaaaggg
gaggagcctgcttctgaaaccatggcgactgttgtgcgttctaacgtggcaaacgggcag
agcaccaatgaacgtgtgttggaggagagcagagatctcaactcagccaaaactacacca
gacgaggagcgcagcatgttgagcggacccccagcaggttggtacagagagtttgtgtcc
aacgccgacgccgagctcctggagcattctgggaaattaatgctgctggtggagattctg
cactgtgccgaactgcagcaggataaagtgttggtgtttagtcagtctctcgtttcactg
gacctgattgaaaccttcttggggttggccgataaggcaaagaaggagggaaaggccagt
gtgtataaagggaagcagtcgtgggtgcgggataaggactattatcgtctggacggttcc
accaccgcaacagcacgcaagaagtgggctcaggagttcaacaacgtcagaaacacacgc
tgcaggttgttcctgatctccactcgagccggatcgttagggattaatctcatcgcagcg
aatcgagtcgtggtgttcgacgcatcatggaatccgacgtacgacgttcagagcatgttc
agagtgtatcgcttcggccagaagaaggccgtatacgtctaccgcttcctggcacaggga
acgatggagcagaagatatacgagcgtcaggtggcgaagcagtctctgtcgtcccgtgtg
gtggaccagcagcagatccagcggcacttcacacacagccatctgagcgacctgtaccgc
ttccaacctgacatccacagcaagagccacgccgtggagcctacggacaaggtgctggcg
gtgctcctgcagcactgtgggcggtccatagtgtcgttccatgaacacgattcgctgctg
gaccacagggtggaggaggagctcagcatggaggagaggaaggaggcgtgggaggagtac
cggctcgaggagacaacacaaacacacacacgtgcctccgtcctggatttgggtgagctg
aggaggaagagcaataacgagctggaggacatgttaaagaaaggtcgtctggaactgcag
agagcttcacacaacatcaaagcccaaagtctggagttcttccagcaggaagtgatgaaa
cgctaccctctgctggatgaagagaagatgaagctgaaggcctctcagtcttatgagcac
tacgaaagagagagagcacgctggatggagatttaccaatgtaaactcgccggtcagcaa
aagctcattcagtacacacaacagattctggctaaaagggcggcgcatagcagtagagct
cctcccactacatccacacccctcaaatcacggtttgaagcaggtgactcttattcggcc
ccgccccttcagcctgccccgccccttcagcctgccccgccccacccgtccagagaaacg
gatcgtacggctggttccctcagccactga
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integrated database retrieval system
