Ictalurus furcatus (blue catfish): 128603776
Help
Entry
128603776 CDS
T09387
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128603776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128603776
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128603776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_4
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128603776
NCBI-ProteinID:
XP_053474426
LinkDB
All DBs
Position
28:complement(13812013..13830074)
Genome browser
AA seq
783 aa
AA seq
DB search
MEPFSLDTDDRTDEERTKTKATKKDRQAYGKAKAPMDTELAEDHGDFACQVRINLNFSGD
IQGIKAEPDQHERFDIKRLFDAVSSGDVTRLESLEEYLLKTHKKLTNNEYRPNGKTALMK
ALLNLKNGDNKAVEHLLGIADRMGHLDKLVNAAYTDPYYEGQTALHIAIERRNKRYVELL
IQKGADVHAKACGTFFQPLGEACFYFGELPLSLAACTNQKDIVDLLMDKADVRRTDTLGN
TVLHALVMVADNSPENTDFVISMYDYILTKDAAKNPKEKKLEDIENNQGLTSIKLAAKLG
RIGLFEHILHREFPQEECRHLSRKFTEWAYGPVYASLYDLDSVDSYEPNSVLEIVVYGTE
IPNRLEMLQTEPLNKLLEDKWNRYAHRIFLFKFIVYIIYLIIFTTVSYYREEGTSEKRPP
FPIKKYTQKNVEANIPDGYLLFVGQVIMAIGSLYFFISVLMNIKRKRPSLKTLLVDGYSE
LLFLLQAVFFIICAGLYCGGMNEYLAFLVLSVALCWVNVLYFSRGTRHMGIYSVMIQKMI
LSDILRFLFVYVVFLFGFSAAVVTLLKDDPEELNGPAQNNRTHGRSFFTDNPNPAEGCNK
PTFKTIAFTTLELFKFTIGMGDLEFTEKYEYKHVFYVLLITYIVLTYILLLNMLIALMSK
TVEKMSKESTGIWKLQRAITILDLERYACCLKNKLRSGVRRNLGKRQDDWRWCLRVEEVN
WKKWNRNLGIISEDPGECNTVMQTGPQREPSRRGFLREISRRRPHTRMVPSRQETEPLAS
SPV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaacccttttctttggacacagatgacaggacggatgaggagaggactaagaccaaa
gcaaccaaaaaggatcgtcaagcgtatggaaaggccaaagcaccaatggatactgaactt
gcagaggatcatggtgattttgcttgccaagtccgaatcaacctgaacttttctggtgac
atacaagggataaaagccgaaccagatcagcacgagaggtttgacattaagaggcttttt
gatgccgtgtccagtggtgatgtcactaggctggagagcctggaggagtatctgcttaaa
acacataagaagctgacaaacaatgaatatcggcccaatgggaagacagccctgatgaag
gctctgctaaacctgaaaaatggagataacaaagcagtggaacacttgctgggtatcgca
gatagaatgggacatctggataagctagtgaacgcagcatatacagatccctactatgaa
ggacagacagctcttcatatagccattgagaggaggaacaagcgttatgttgagctgctc
attcagaaaggggctgatgtccatgcaaaggcttgtgggacattcttccaaccacttggt
gaagcatgtttctactttggggagcttcctctttctctggcagcgtgtactaatcagaaa
gacatagtggacctgctgatggataaagcagacgtgaggcgtacggacactctgggcaac
acggttcttcatgcgcttgtgatggtggctgataacagccctgaaaatacagacttcgtc
atttccatgtacgactacattcttaccaaagacgccgctaagaatcccaaagaaaagaag
ctggaggacattgagaacaatcagggacttacttccatcaagctggctgcgaagctagga
aggattgggttgtttgaacacattctgcatcgcgagttcccgcaagaagagtgcaggcat
ctgtcccgaaagttcacagagtgggcgtatggcccggtgtacgcttcactatatgacctg
gactctgtggactcctacgagccaaactctgtcctggagatagttgtttatggcacagaa
atacctaatcgtctcgagatgctccaaactgagccacttaataaactgctggaagacaaa
tggaacagatacgcccaccggatattcctcttcaagtttattgtttatatcatatacctc
atcatcttcacaactgtgtcttattaccgtgaagaaggaacgagtgaaaaaagaccccca
tttccaattaagaaatatactcagaaaaacgttgaggcaaatattccagatggctactta
ctgtttgtcggacaggtcatcatggctatcggatcactctacttcttcatcagtgtgctg
atgaatataaagagaaagcggccaagtctgaaaacactgctggtagacgggtattctgag
ctgctttttttattgcaggctgtattctttatcatctgtgcggggctgtattgcggtggg
atgaacgagtatcttgccttcctggtgctcagtgtggctctgtgctgggttaatgtgctc
tacttttctagaggaacccgacacatgggcatctacagcgttatgatccagaagatgatt
cttagcgacatcttgcgcttcctcttcgtatacgtggtctttctctttggattttcagca
gctgtcgtgactctactcaaagatgaccctgaagagcttaatggaccagcccagaataac
cgcacgcatgggcggtctttttttacagacaatccgaacccagctgaaggctgcaacaaa
cccacctttaaaaccatcgccttcaccactctggagctgtttaagttcactataggcatg
ggcgacctggagttcacggagaagtacgagtataaacacgtattttatgtgctacttata
acctacattgtgctcacgtacattctgctgctgaacatgctgattgctctgatgagcaag
actgtggagaagatgtccaaggaaagcaccggtatctggaaactacagcgtgccatcacc
atattggatctggagagatacgcatgctgtctgaagaacaagttgcgctcaggagtaagg
aggaacctgggcaaaagacaggacgactggcgctggtgtctcagagtggaagaagtcaac
tggaaaaaatggaaccgcaacctgggcatcatcagcgaggatcctggagaatgcaacaca
gtgatgcagactggacctcaaagagagcccagccggcgtgggttcctacgtgaaatcagc
cgacggaggccccacactcgtatggtcccgtcacggcaggagacagaacccctggcatct
agtccagtgtaa
DBGET
integrated database retrieval system
