Ictalurus furcatus (blue catfish): 128603816
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Entry
128603816 CDS
T09387
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04514
Cell adhesion molecule (CAM) interaction
ifu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128603816 (lrrc4ba)
04517 IgSF CAM signaling
128603816 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128603816 (lrrc4ba)
Cell adhesion molecules [BR:
ifu04515
]
Immunoglobulin superfamily
NGL family
128603816 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
LRR_9
V-set
LRRNT
Ig_2
VEGFR1-3_N_Ig-like
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
128603816
NCBI-ProteinID:
XP_053474499
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All DBs
Position
2:complement(38221791..38283413)
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AA seq
728 aa
AA seq
DB search
MRITTVTVLPNPAPFFFLLAQLLFWLLLLGQDIAGATSTCPTPCSCSNQASRVICTRRNL
DEVPENISNNTRYLNLQENSIQVIRSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTPLIRLEELELSGNKLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADTSVNYTYFTTVTVETVESTGEEDSALRSINETIIHIPGPT
PSGRLWHDAIPTTTSSLSVFGSSSSPRATKPTFTVSVSEPSYPTGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGASASVRGSGISGGSTMP
QAGSSGGSQSLRLHHPEIVNLPNLARTDHLNHYYKPHHFNNNMMSLGLSGSSGIGLNNNN
NPCSQAQPTPISCSQVPVSVSSIPSSMPLPTLGIHGSLKGLMGKGQNPQIEPLLFKSGSK
ENVQETQI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccacggtgaccgtccttcctaaccccgcccccttctttttcctattggcc
cagctgctgttttggctcctcctcctgggccaggacatcgcaggagccacgtcgacctgc
ccgacaccttgcagctgctccaatcaagcgagccgagtgatctgtaccagacggaacctg
gacgaggttccggaaaatatatccaacaacacgcggtaccttaacttacaggagaactcg
atacaggtgataagatcagataccttcaagcacttgcgacacttggagatcctccagctt
tccaagaaccagattcgtcagatcgaagttggcgcgttcaatggcctcccgaacctcaac
actttggaactgtttgacaaccgtctcacgctggtgccatcacaagcgttcgagtatctc
agcaagcttcgggagctctggcttcgtaacaaccccatcgagacgttgccaggctatgcc
ttccaccgcgtgccctcccttcgtcgccttgatctgggtgagctcaaaaagctggactac
atttcagatgctgcctttgtcggccttgtcaatctgcgctacctgaacctgggcatgtgc
ggtctgaaggacatccccaacctgacacccctgatccggctggaggagctggagctctct
ggaaacaagctggaaatcataagacctggatcgttccaaggcctggagtctttgcgcaaa
ctgtggctcatgcactcccagatgtctgtcattgaacgcaatgccttcgatgaccttaag
agtctggaagagttgaatctatcccacaattccctgcattcactgccccatgacctcttc
accccattgcagaagctggagagagtgcacctcaaccacaatccctgggtgtgtaattgt
gatgtgctttggcttagttggtggctgaaagaaactgtaccaagtaacacaacttgctgt
gcccggtgccatgcaccaccctacctgaagggcaaatacattggagagctggaccaaagc
catttcacgtgctatgcccctgttatcgtcgagccccccactgacctcaacgtgaccgaa
ggcatggctgctgaactcaagtgccgtaccggaacctccatgacgtctgtaaactggatt
acacccaatggaaccttgatgacccatggatcataccgcgtccggatctcggtgctacat
gatggaactctgaattttacaaatgtcaccttgcgcgacactggtcagtacacctgcatg
gtgaccaactcagctggcaacaccacagcaactgccgtcctgaatgtcactgcagcagac
accagtgtcaattacacctactttactaccgtcactgttgaaactgtagaatccacagga
gaagaggattcggccctacgttcgatcaatgagactattatacacatccctggtcctaca
ccttctggacgtctctggcatgatgccatcccaacaacaacttcctctctatcagttttt
ggatcctcatcttctccccgagcaaccaaacccacatttactgtctctgtctctgagccg
agctaccccactgggctggatgatgtaatgaagactaccaagatcatcattggctgcttt
gtggctattaccttcatggcagctgtcatgctggtggtcttctacaagctgaggaagcag
caccagttgcacaagcaccatggaccagcgagagccattgagattatcaacgtggaggat
gaaattggagccagcgccagcgtccgaggaagtgggatctctggtggttccaccatgccc
caggccggatccagcggaggaagccagagcctgcggctgcatcacccggagattgtcaac
ctacccaacctggctcggacggaccacctcaaccactactacaagccccaccacttcaac
aacaacatgatgagtttggggctctctggaagttctgggatcggcctcaacaacaacaac
aacccgtgttcccaggcccaacccacgccgatctcctgttcccaggtgcccgtctcagtg
agctccattccgtcctcaatgcccctgcctaccctcggcatccatggatcactcaaaggc
ctaatgggtaaagggcagaaccctcaaatcgagcctttactctttaagagtggctccaaa
gagaatgtccaagaaactcagatctga
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