Ictalurus furcatus (blue catfish): 128603974
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Entry
128603974 CDS
T09387
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu02010
ABC transporters
ifu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128603974 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128603974 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ifu02000
]
128603974 (abca1a)
Transporters [BR:
ifu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128603974 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
AAA_22
Motif
Other DBs
NCBI-GeneID:
128603974
NCBI-ProteinID:
XP_053474721
LinkDB
All DBs
Position
29:complement(16248231..16278922)
Genome browser
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNLTYRRRQTVQLLIEIVWPLFIFFILISVRLHYPPHEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNDSIISRLFTDAKKILLYSQHDK
SLEGYKGLVRALKKLQSNAAGFKLKDFLRDNETLSEFLEQNATLSRHAVQQIVDANVNLE
KVLINGFGVHLRDLCNTTSLEEFVRIADPDVSEMTQKIICQSPADWLNSAESHFLSNLDF
LKPIRNDVRSNPKLVQDVSLATDTLLESLGSLAVQLVSMKSWRDMRKEILFLTGNATNSP
NHVYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHNDSDNEPTSAYDNTSTPYCN
NMMKNLESTPISRMIWRALKPLLMGKILYTPDTPATRKIIHEVNKTFQELGVLRDLGGMW
EEMRVKVWDFMESSEEVDLVRTLLQNNASAQFFNDRLTGTDWRVEDISQFLTKASEDTRP
PGTGYTWRDAFNETDQAILTISRFMECVNLDKLEPVSTEERLVNKSMRLLDNRKFWAGIV
FPDMQADSSELPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPYEDLRYIWGGFSYLQ
DVVEHGIIRALTGSKEKTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAIIIK
GIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGV
VYLFLVSFAIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGAKV
VVSLLSPVAFGFGCEYFALFEEQGVGIQWNNLLSSPMQEDNYSLTTSISLMLIDAVLYAI
MTWYIEAVFPGQYGIPRPWYFPLTKSYWCGEKCGWTTASSTKKKENAEAVCIEEVPADLE
PGVYIENLVKVYRHGNKLAVDDLTLGFYEDQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRSDLSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKSEVEQIV
SDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDFDL
SLSSCRNSSNTVSCSKNSLKKDDSVSESSSDAGLGSDHESETTTIDISLISNVIFKHVPS
ARLVEDLGHEITYVLPYEAAKDGGFVELFHEIDDRLVDLGISSYGISDTTLEEIFLKVAD
DNGVDAVTADGTIPRRHRRHAFGDHQSCLKPFTEDDSFDLNDSEGDPESRETDWLGVSDG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLELEPSMYEEQYTFISNDAPDDTHTNKLLGALTDSPAYRGRCSEDGTPGDGSCPIRD
SEWIVPEVPKTVSDMFQTGNWSMENPSPLCECSCEEKKKMLPECPPGAGGLPPPQIKTSG
TDTLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQGLPPSDEISK
AIAHMRARFSLERGTAPDRFLRGLSSFISGLDTKNNVKIWFNNKGWHSIAAFLNVMNNGI
LRASLPAGLNPAKFAIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPFLYWLANFLWDMCNYIVPATLVIIIFVCFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEVGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAVEGVVFFCITVLIQYRFCIKARGFSAHLKPVSEEDEDVARERQRILGGGGQSDILE
LRQLTKVYKRKQKPAVDRLCVGIPRGECFGLLGVNGAGKTSTFKMLTGDSIITSGEAYLA
GKSVLTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLG
LVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGSEPRLE
PVMELIERELPGSTLKEKHRNMLQYQLPSSLSSLARIFNILSKNKAQLHIEDYSVSQTTL
DQVFVNFAKDQSDEDHLKDISVNKSDAVVDFSQLDTFLTDAKAQETVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagctgggattgctgctgtggaagaacttaacctaccgacggaga
cagaccgtccagctcctgattgagatcgtctggcctctcttcatctttttcattctgatc
tccgtgcgactccactatcctccgcatgagcagcatgaatgccattttcccaacaaggcc
atgccatccgcgggcactttgccctgggtacagggaatcatctgcaacgctaacaacccc
tgcttccggtaccccactcccggagaggctcccggtgtggtgggcaactttaacgactcc
ataatctcacggctgttcactgacgccaagaaaatcctcctctacagccaacacgataag
agtctcgaagggtacaagggacttgtccgagctctgaagaaactacagagcaacgctgca
ggctttaagttgaaggacttcctgcgcgataatgaaaccctgtctgagttcctggagcag
aacgcaacgctgagcagacacgccgtgcagcagatagtggacgccaacgtcaacctggaa
aaagtgctgattaatggtttcggcgtgcacctgagagatctgtgcaacacgacgtcgttg
gaggagtttgtccgcatcgccgatcctgacgtctccgagatgacgcagaaaatcatctgt
cagtcgcctgctgattggctgaacagcgcagagagccacttcctgtccaaccttgacttc
ctgaaacccatacggaacgacgtcagatccaaccctaaactggtccaggacgtgtctctg
gccactgatacgcttctggagagtctgggatctttggctgttcagctggtgagcatgaag
agttggcgtgacatgaggaaagagatcctgttcctgaccggaaacgccacaaactcaccc
aatcacgtgtaccaagccgtgtcgcgcatcgtgtgtggacatccagagggcggcggcctg
aagatcaaatccctcaactggtacgaagataacaactacaaggccctgttcggtaaccat
aacgacagcgacaacgagcccacgtccgcctacgacaacacgtccactccgtactgtaac
aacatgatgaagaatctggagtcgactccgatctcacggatgatctggagagcgctgaag
cctctgctcatggggaagatcttatacacacctgatacaccggctacacgcaagatcata
cacgaggtgaataagacgttccaggagctgggtgtgctgcgggatttaggaggcatgtgg
gaggagatgagggtgaaggtctgggacttcatggagagcagtgaagaagtggatcttgtg
agaactctgctccagaataacgccagcgctcagttcttcaacgacaggctgacagggacg
gactggcgagtggaggacatttcacagttcttgactaaagcctctgaggacacgcgcccc
ccgggtacagggtacacctggagagacgcgtttaatgagacggaccaggccattctgacc
atctcacgtttcatggagtgtgtgaacttggacaagttggagccggtgtcgaccgaggag
cgtctggtgaataaatccatgagactgctggacaatcgcaagttctgggccgggatcgtg
tttccggacatgcaggccgattcctccgaacttcctcccaatgtcaactacaagattcgc
atggacatcgacaacgtggagcgtaccaataagatcaaggacgggtactgggaccctggt
ccccgtgcggacccatatgaggatctgcgctacatctggggaggattttcatacctacag
gacgttgttgaacacgggattatccgggctctgacaggaagcaaggaaaaaactggcgtt
tacatccagcagatgccgtacccgtgttacgtcgacgatatgttcttgcgtgtgatgagt
cgctcgatgccgctcttcatgacgctggcctggatgtactcggtggccatcattattaaa
ggcatagtgtacgagaaagaggcgcgtctgaaggagaccatgaggattatgggattggat
aacgggatcctgtggctgagctggttcattagcagcctgatcccactgctcatcagcgcc
gccctgctggtcctcatcctgaagatggggaaccttctgccctacagtgacccgggtgtg
gtctatctcttcctggtgtccttcgccatcgtcaccatcatgcagtgtttcctgatcagc
acgctgttctctcgggccaacctggccgccgcctgtgggggcatcatctacttcaccctg
tacctgccctatgtcctgtgtgtggcctggcaggactacattggcttcggggctaaagtg
gtcgtgagcctgctgtctccagtggcgttcggttttggctgtgagtactttgcgctgttc
gaggagcagggagtgggcattcagtggaacaacctgctgtccagccccatgcaggaggac
aactacagcctcactacctccatctcgctcatgctgatagacgccgtgctgtacgccatc
atgacgtggtatatcgaggctgtcttcccaggtcagtacggcattccccggccgtggtat
ttccccctcaccaaatcttactggtgcggagagaaatgcggctggacgacagcttcctcc
accaagaagaaagaaaacgcagaagctgtgtgcattgaggaggtaccagctgatctggaa
cccggtgtctacatcgagaatctagtgaaggtctacagacatggcaacaagctggcagtg
gatgacctcacgctgggcttctacgaggatcagattacctccttcctgggccacaatgga
gcaggaaagaccaccaccatgtccattctaactggcctgttccctcccacatctggcacc
gcttacattatgggcaaagacatccgttcagatctaagcgccatccgtcagaacctggga
gtgtgtcctcagcacaatgtcctgttcagcatgttgacggtagaagagcacatctggttc
tatgctcgtctgaaaggcctgtcagaggagaaggtgaagtccgaggtggagcagatcgtc
tcagatttaggcctccctcacaaacgcaaatctcgtactagtcagctttcaggaggaatg
caaaggaagctctctgttgctttggcatttgttggaggttcaaaggtcgtgatcctggat
gaaccgacagctggggtcgatccgtacgctcgcaggggcatctgggacctgctgctcaag
tatcggcaaggtcgaaccatcatcctctccacccaccacatggacgaggccgatattttg
ggcgaccgcattgccatcatctctcatgggaagctgtgctgtgtgggatcctccctattc
ctgaagacccagctgggtactggatactacctaactctggtcaagagggattttgacctg
tctctgagctcatgtcgcaactccagcaacaccgtgtcctgttccaagaacagtctgaag
aaggatgacagcgtctctgaaagcagctctgacgccggccttggcagtgaccacgaaagt
gaaactaccaccatcgacatctccctgatctccaacgtcatcttcaagcacgttccctca
gccagactggtggaggatctgggccatgagatcacctacgtgctgccttatgaagcagcg
aaggatggtggctttgtggaactcttccacgagattgatgatcgcctcgtcgacctcggc
atctccagctatggaatttcagacaccacgctggaggagatcttcctgaaagttgcggat
gataacggagtcgacgctgtaaccgcggatggcactattccaaggaggcaccgccggcat
gcgtttggtgaccatcagagctgtctgaagcccttcaccgaggatgacagctttgatttg
aatgattctgaaggtgatccagaatcccgggagacggactggttaggagtctctgatgga
aaaggctcgtaccaggtgaaaggttggagtctgaagaggcagcagtttgtggctttactc
tggaaacgtttcctgtatgcccgtcgctctcggaaaggattctttgctcagattgttctt
ccagctgtgttcgtgtgcatcgccctggtcttcagtctaattgtgccacctttcggaaag
tacccaagtctggagctggagcccagcatgtatgaggagcagtacaccttcatcagtaac
gacgccccggacgatacgcacactaacaagctactcggagcgttaacggacagtccggcc
tacagggggcggtgttcagaggacgggacgcctggagacgggtcatgtccgattagagac
agtgagtggattgttcccgaagttcccaagaccgtatcggacatgtttcagaccggaaac
tggagcatggaaaacccgtcacctctctgtgagtgcagctgtgaggagaagaagaagatg
ctgcccgagtgtccacccggagcaggcggccttccaccaccacagatcaaaaccagcggt
acagacacactgcagaatctaacagggaggaacatctccgactacctggtgaaaacctac
gctcagattattggaaagagtttgaagaacaaactctgggtgaatgagttcagatatggc
ggattctcattgggcgccagaagctcacaaggcctgcccccttcggatgagatctccaag
gctatcgctcatatgcgtgctcgtttcagcttggaaagaggcacggcaccagacaggttt
ctgagaggtttatccagcttcatcagtggcctggacaccaaaaacaatgtcaagatctgg
ttcaataacaaaggctggcacagcatcgccgcgttcctcaacgtgatgaacaacggaatc
ctgcgtgccagcctgcccgccggtctgaaccccgccaaatttgctatcaaagcttttaac
cacccgctgaacctcactaaagagcagctctctcaggtggccttgatgaccacctcagtc
gatgtcctggtctccatctgcgtcatcttcgccatgtccttcgtcccggccagctttgtg
gtcttcctcattcaggagagagtgaataaagccaagcacatgcagttcatcagcggagtt
cagcctttcctctactggctcgcaaactttctgtgggatatgtgtaactacatcgtccct
gcaacactcgtcatcatcatcttcgtctgcttccagcaggaagcctatgtctcgtccacc
aaccttcctgtcctcgcgctccttttactgctttatggctggtccataactcctctgatg
tacccagcatcattcttctttaagatccccagcacggcctacgtggtcctaaccagcgtc
aacatcctcattggaatcaacggcagcgtgtccaccttcgtcctggagcttttcggtagc
aatgaggtcggtggcatcaatgacattttgaaaaacgtcttcctgatcttccctcacttc
tgcctgggacgtgggctgatcgatatggtgaagaaccaggccatggcggatgctctggag
agattcggtgagaatcggttccgttctcctctggcatgggacatggtggggaagaacctc
tttgctatggcagtggaaggcgtggtcttcttctgcattacagtgctcatacagtatcgc
ttctgcatcaaggccaggggctttagtgctcacctgaagccagtcagtgaggaggacgag
gacgtggccagggagaggcaaaggattctgggtggaggtggacagagtgacatcctggag
ctcagacagctgaccaaggtgtataagaggaagcagaagccagcggtggacagactgtgt
gtgggaattccacgtggagagtgttttggattgcttggtgtgaacggcgctggaaaaacg
agtaccttcaagatgctcactggagattcgatcatcacgagcggagaggcttatttagct
ggcaagagcgtgctgacggagatcaatgaggtgcatcagaacatgggctactgtcctcag
tttgacgccatcaacgacctgctgaccggccgagagcacctggagttttacgccattcta
cgtggagtgcccgaaaaagaagtgtgcgaggtggcagagtggggaatccgtaaactgggt
ctggtgaagtatgtggacaaatcggcaggaagctacagcggaggaaacatgcgcaaactc
tccacggccatcgctctgattggaggcccacctgtggtgttcctggacgaacccacgacc
ggtatggacccgaaagcacgacgtgctctgtggaactgtatcctcagcatcattaaagag
ggacgatctgtcgttctcacctcacacagtatggaggagtgtgaggctctgtgtactcgc
atggccatcatggtcaatggcaggttccgttgcctgggcagtgttcagcatctaaagaac
aggtttggtgatggctacacgatcatcctgcgcgtggcagggtccgagcctcgtctagag
ccggtgatggagctgattgagcgcgagctacccggcagcaccctgaaggagaaacacagg
aacatgctgcagtaccagcttccatcgtctctctcctcactggctcggatcttcaacatc
ctgtccaagaacaaagcgcagctccacatcgaggactactccgtctcacagaccacgcta
gaccaagtttttgttaatttcgccaaggaccaaagtgatgaggaccatctcaaagacatt
tctgtaaacaagagcgatgccgtggtggacttttcacagctggacacgttcctcacggac
gctaaagcgcaggagacggtggtgtga
DBGET
integrated database retrieval system
