Ictalurus furcatus (blue catfish): 128604062
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Entry
128604062 CDS
T09387
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128604062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128604062
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128604062
Intermediate filaments
Intermediate filament-binding proteins
128604062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
TrbK
Motif
Other DBs
NCBI-GeneID:
128604062
NCBI-ProteinID:
XP_053474810
LinkDB
All DBs
Position
29:complement(6956574..7063093)
Genome browser
AA seq
2347 aa
AA seq
DB search
MELQRATSMPGPLSPGHISPGHLSPEHLSPGPGPSYQDSSPAISYGAAAFNYNQLEGRFK
QLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKG
RMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVET
EDSKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLK
KSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVE
GKRIGKVLDNAIETEKMIEKYESLACDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNT
YRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKGWERLEKAEHER
ELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEA
IETDIAAYEERVQVVVAVASELEAENYHDIKRITVRKDNVLRLWEYLLELLKARRQRLEL
NLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHTLVEADIAIQADRVKS
VNANAQKFADDSEGYKPCDPQVIRDRVAHMEFCYQELTQLAAERHARLEESRRLWKFFWE
MAEEEGWIREKEQILSSDDYGKDLTGALRLVSKHKAFEDEKSGRAGHLQQTVHQGEELVA
AGHFGADKISQRISDVQEQWVALEQLSAARKVRLQEACAVHQFQADADDMDAWMLDALRI
VSSTDVGHDEFSAQALVKKHKDVAEEISSYRPVLDALHEQAKTLPEEQAHSADASGRLTG
IEERYKEVVELTRLRKQALQDALALYKMLSEADACELWIDEKEQWLNGMEIPEKLEDLEV
IQHRFESLEPEINSQASRVAVVNQIARQLIHSGHPSEKEIKTQQDKLNTRWSQYRDLVDQ
KKDALNSTLGVQNYYLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLV
AIEDKLGDLGKEADRLAEEHPDQAPGIKGHLGEIKDVWEEMKGTMCAREESLGEASKLQQ
FLRELDDFQVWLSRTQTAVASEDMPNTLAEAEKLLAQHEGIKNEIRNYKEDYQKMRDMGK
TVTQGQTDAQYMFLSQRLQALDTGWNELQKMWENRKKLLSQSHAYQLFLRDTKQAEAFLN
NQEYVLAHTEMPATLEGAEGAIKKQEDFMTTMDANEEKINGVVETGRRLVSDGNINAERI
QEKVVSIEERHKKNREAARELLTKLKDNQDLQRFLQDCQELSLWISEKMLTAQDMSYDEA
RNLHSKWLKHQAFMAELQSNKEWLEKIQKDGTALVAEKPETEAVVKEKLEFLKKMWDELE
STTQTKAQCLFDANRAELFTQSCADLDKWLSGLQGQIQSDDFGKDLTSVNILLKKQQMLE
SQVEVRQKEVEELRTQAQALSQEGKGSDEVDGLRCGVEKKFHELQEPLKKRRSNLMASRE
IHQFNRDVEDEILWVEERMPMATSTEHGNNLQTVQLLIKKNQTLQKEIQGHQPRYDDIFE
RSIHILKDNSPVSATIRQRLDELKRLWHLIQEEVEKRHRRLEEAHKAQQYYFDAAEAEAW
MSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRALVAAGHPESE
RISMRQSQVDKLYAGLKDLSEERRGKLDERSCLFQLNREVDDLEQWIAEREVVAGSHELG
QDYEHVTMLQERFREFARDTGNIGQERADTVNKMADELINSGHADAATIAEWKDGLNEAW
ADLLELIDTRTQILAASYELHKFYHDAKEVLGRILDKHKKLPEELGRDQNTVEALQRMHT
TFEHDIQALGTQVKQLQEDAVRLQSAYAGDKAEDIQRREAEVLEAWRSLLEACDGRRVRL
IDTNDKFRFFSMVRDLMLWMEDVIRLIDAQEKPRDVSSVELLMNNHQGIKAEIDARNDSF
TTCVELGKTLLSRKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDAG
VAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFAALERLTTMELLEV
RRQQEEEERKRQAQPVEAPPGDTASPQQRECEQVSQNGPPPEQDSPREDTGGVDVVNGVA
EPSPSSSPTGSRKGKAGQAATLPTKSQDTASAQIEGFLNRKHEWEGHNKKASNRSWHNVY
CVINNQELGFYKDSKSASQGIPYHGEVPISLKESTCEVALDYKKKKHVFKLKILNGNEYL
FQAKDDEEMNSWIQAISCKTPSEISSHSTPASGRTQTLPTSVSMGAESSPGKREKDKEKR
FSLFKKK
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagggctaccagtatgcctggacccctgtctcctggacacatttctcct
gggcatctctcccctgagcacctgtctccagggccaggaccatcgtaccaagactccagt
cctgccatcagttacggcgcagccgcttttaactataaccagctggagggacgatttaag
cagctgcaagatgagcgagaagcagtgcagaagaagacctttaccaaatgggtgaactcc
cacctggcccgagtctcctgccgcatcacagacctctacatggatctgagggatggccgc
atgctcattaagctcctggaggtgctgtctggagagagactgccgaagcccacaaaaggt
cgtatgcgaattcactgtctggagaacgtggacaaagctctgcagttcctcaaagaacag
cgcgttcatctcgagaacatgggctcgcatgacattgttgatggcaaccaccgcctcacc
ctgggcctcatctggaccatcattctgcgcttccagattcaggacattagcgttgagacg
gaagacagcaaagaaaagaagtctgccaaggacgctctgcttctctggtgtcagatgaag
accgcaggttatccaaatgtcaacattcacaatttcaccacgagctggagagacggcatg
gccttcaatgcactcattcacaaacacaggcctgacttgatagactttgacaagctgaag
aaatccaatgcccactataatttgcagaatgcctttaacctggctgaacagcacttgggc
ctcacaaagctgctggaccctgaagatatcagcgttgaccaccctgatgaaaaatcaatc
atcacctatgttgtcacttactatcattacttctccaagatgaaggcactgaaagtggaa
ggcaaacgtattggaaaggtgctagacaacgctattgaaactgagaagatgattgagaag
tacgaatctctggcctgtgacctgctggagtggattgaacagaccatcattatcctcaat
aatcgcaagtttgccaactctctggttggagtgcagcagcagcttcaggcctttaacacc
taccgaacagtggagaaacctcctaagtttacagaaaaaggcaacctggaggtcctgctg
ttcaccattcagagcaaaatgcgagccaacaatcagaaagtctacatacctcgagaggga
aaactcatatcagacatcaacaagggatgggagaggctggagaaggcagagcatgagagg
gaactggctctgaggacggagctgattcgtcaggagaagttggagcagctagcccgccga
tttgaccgcaaggcagctatgagggagacctggctaagcgagaaccagagactcgtctca
caggacaactttggttttgatctgcaagccgtggaggcggccactaagaagcacgaagcc
atcgagacggacattgctgcatacgaggagcgtgtgcaggtggttgtggctgtagcctca
gagctggaggcggagaactaccatgacatcaagcgcatcacagtccgcaaagacaacgtt
ctgcggctgtgggagtacctcctggagctcctgaaagctcgacgccaaagactggaactc
aacctgggcctgcagagagtcttccaggagatgctctacatcatggactggatggatgag
atgaagatgttgctgttgtctcaggactatggaaaacatctgcttggtgtagaggacctg
ctgcaaaaacacactctggtggaggcagacattgccatacaggctgaccgtgtcaaatca
gtcaatgccaacgcgcagaagtttgctgatgactctgaaggctataagccctgtgaccca
caagtgatccgtgaccgcgtggcccacatggagttctgctaccaggagctgacacagcta
gcagcggagcggcatgcacgtctggaagagtcacgtcgcctctggaaattcttctgggag
atggctgaggaggaaggctggattcgtgagaaggagcagattctgtcatcagatgactat
ggcaaggacctgacaggggcactgcgccttgtgagcaagcacaaggcctttgaagatgag
aagagtgggcgtgccggacacctccagcagactgtgcaccagggtgaggagctggtagcc
gctggccactttggtgccgacaagatcagtcagcgtatttccgatgtacaagagcagtgg
gtagcactggagcagctgtcggcagcccgcaaggtccgtctgcaggaggcctgcgccgtg
caccagttccaggctgacgctgatgacatggatgcctggatgttggatgcattgcgcatc
gtgtccagcactgatgtgggtcatgacgagttctcagcgcaggcattggttaagaagcac
aaagatgtggctgaagagatttccagctacagaccagtgctggatgcccttcatgagcag
gccaaaacgttacctgaagaacaggcacactccgcagatgcaagtggccgtctaacgggt
atcgaggaacgatataaggaagtggttgaactgaccaggctgagaaagcaggcactgcag
gacgcactggcattgtacaagatgctgagtgaggctgatgcctgtgagctatggatcgat
gaaaaggagcagtggcttaacggaatggagatcccagagaaactggaggatttggaggtg
attcaacacagatttgagagtctggagccagagattaacagccaggcttctcgggtggcc
gtggtgaaccagatcgcccgccagcttattcacagtgggcacccaagtgagaaagagatc
aaaacccagcaggacaagctcaacaccaggtggagccagtatcgtgacctcgtagaccag
aagaaggacgctctcaactcgactttgggagtacagaattactatcttgaatgcaatgag
accaaatcctggattcgcgaaaagaccaaggtgatcgagtccacccaggatctgggcaac
gatctggctggtgtcatggcacttcagcgcaagctgactggcatggaacgagacctagtt
gctatagaagacaaactgggtgacctggggaaggaggctgaccgattggccgaagagcat
ccagaccaggctcctggcatcaagggccatttgggtgagatcaaagatgtgtgggaggag
atgaagggaaccatgtgtgctcgtgaagagtccctgggtgaggccagcaagctccagcag
ttcctcagggaactggatgacttccaggtgtggctgtcacgcacacagactgctgtggct
tctgaggacatgcccaacactctggctgaggccgaaaagcttttggcacagcatgaggga
atcaagaatgagatccgtaactacaaggaggactaccagaaaatgcgtgacatgggcaag
acagtgacccagggccagacagatgcccagtacatgttcctgagtcagaggctgcaagcg
ctggacactggctggaacgagctccagaagatgtgggagaacaggaagaaactcctgtcg
cagtctcatgcctaccagctcttcctccgggatactaagcaggctgaggctttcttgaac
aatcaggaatatgtattggcccacacagagatgccagctacccttgaaggagcagaaggg
gctatcaagaagcaggaagacttcatgacaaccatggatgccaacgaggaaaagattaat
ggcgtggtggagacgggccgcaggctggtcagtgatgggaacattaacgccgaacgtatc
caagagaaagtggtctctattgaggaaaggcataagaagaatcgtgaggcagcccgtgag
cttctcacaaagctgaaagataaccaagatctccagaggttcctccaggactgccaggag
ttgtccttgtggatcagcgagaagatgttaacagcacaggacatgtcctacgatgaagca
cgcaacctgcacagcaagtggctgaagcaccaggctttcatggcagaactgcagtccaac
aaagaatggctggagaaaattcagaaggatggcacagcactggtggccgagaagccagag
actgaggcggtggtaaaggagaaactggagtttctgaagaagatgtgggatgagctggag
tcaacaacccagaccaaggcccagtgcctgtttgatgccaacagggccgagctgttcaca
cagagctgcgctgacctggacaagtggctctctggtctgcagggccagatacagtcagat
gacttcggtaaagacctgactagtgtcaacatcttgttgaagaaacagcagatgcttgaa
agccaggtggaagtgaggcagaaggaggtggaggagctgcgcacacaggcccaagcactc
agccaggagggcaagggatcagatgaagtggacggtctgcgctgtggcgtggagaaaaag
ttccatgagctgcaggagccactgaagaaacgccggagcaacttgatggcctcacgtgag
atccaccagttcaaccgtgacgtggaggatgagattctctgggtggaggagagaatgcca
atggccacatctacagaacacggcaataatttgcaaactgttcagcttctcattaagaag
aaccagactcttcaaaaggagatccagggtcaccagccacgttatgatgacatttttgag
aggagcatacacattttaaaggacaacagtcctgtcagtgcaacaatccgccagcggtta
gatgagctaaagcggctctggcacttgatccaggaggaagtggaaaaacgccacagacgc
ctagaggaagcgcacaaagcccagcaatactactttgatgcagcggaggctgaggcatgg
atgagcgagcaggagctgtacatgatgtcagaagaaaaggcaaaggatgagcagagctct
gtggctatgctgaagaaacaccagatcctggagcaggcagtggaggactatgctgagaca
gtgcaccaactctctaaaaccagcagggccttagtggctgctggacacccagaaagtgag
agaatcagcatgcgacagtctcaagtggacaagctgtatgccggtctgaaggacctgtct
gaagaaagacgtgggaagctcgacgagagatcctgcctgttccagctgaaccgtgaggtt
gatgatttagagcagtggatcgcggagagagaggtggtggcaggttctcacgagcttggt
caggactatgaacatgtcactatgctacaggagcggttccgagagtttgcccgtgacaca
ggaaatattggccaggagcgtgctgacacagtcaacaaaatggcagatgaactgatcaac
tcgggtcacgcagacgccgccaccattgctgagtggaaggatgggctcaatgaggcttgg
gcagacctgctggagttaatcgacactcgcacgcagatcctggctgcgtcctatgaacta
cacaagttctaccatgatgccaaggaggtgcttggacgcatcttagacaaacacaagaag
ctcccagaagagttaggcagagaccagaacactgtagaggcactgcagagaatgcacacc
actttcgaacatgacatacaggctttgggaacacaggttaagcagctgcaggaggatgca
gtacgtttgcagtcagcctatgcaggagataaggctgaggatatccagaggcgtgaggcg
gaggtgctggaggcctggcgttctctgctggaagcgtgcgacggccgccgtgtgcgtcta
atcgacaccaatgacaagttccgcttctttagcatggtgcgcgaccttatgctttggatg
gaggatgtcatccggctcattgatgcacaggagaaaccaagggatgtttcatccgtggag
cttttaatgaacaatcaccaaggcatcaaggctgaaattgatgctcgcaatgacagtttc
acaacctgtgtcgagttgggaaaaactctactttcacgaaaacactacgcttctgaagag
atcaaagaaaagttactccagctgacagacaagaggaaagagatgattgacaagtgggaa
gaccgatgggaatggctgcgactggttctggaggtgcaccagttctcacgggatgcaggt
gtggctgaggcatggctgctgggccaggagccatatctgtccagtcgggagatgggtcag
agtgtggatgaggtggagaagctcatcaagaggcacgaggcgttcgagaagtcagccgcc
acttgggaggagcgttttgctgctctggagaggcttaccactatggaattactggaagtg
agaagacagcaagaggaagaggaaaggaaaagacaggcacaacctgtagaagctccccct
ggtgacacagcatcaccacaacagagggagtgtgagcaggtatctcagaatggaccacca
ccagagcaggactctccccgggaggacacaggaggagttgatgtagttaatggggtggca
gagcccagtccaagctcctccccaacaggaagtcgcaagggaaaagcaggtcaagctgct
acactaccaaccaagtcccaggacacagcttcagcgcagattgagggattcctgaaccgc
aaacatgagtgggagggtcacaacaagaaagcctccaatagatcttggcacaatgtctac
tgtgtgattaataaccaagagttgggcttttacaaagacagcaaaagtgctagtcaggga
ataccataccatggtgaagttcccattagtctgaaggaatccacatgtgaggttgccctt
gactacaagaagaagaaacatgttttcaagctcaaaattttaaatgggaatgagtatctc
ttccaagccaaagatgatgaggagatgaactcatggatccaggcgatctcatgcaagaca
ccctccgagatcagcagccatagcactcccgcctcaggacgcactcaaaccctgcccacc
tctgtaagcatgggtgctgagtccagccctggcaagcgggagaaagacaaagagaagcgc
ttcagcctcttcaagaagaaatag
DBGET
integrated database retrieval system
