Ictalurus furcatus (blue catfish): 128604062
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Entry
128604062 CDS
T09387
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04517
IgSF CAM signaling
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128604062
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128604062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128604062
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128604062
Intermediate filaments
Intermediate filament-binding proteins
128604062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
128604062
NCBI-ProteinID:
XP_053474810
LinkDB
All DBs
Position
29:complement(6956574..7063093)
Genome browser
AA seq
2347 aa
AA seq
DB search
MELQRATSMPGPLSPGHISPGHLSPEHLSPGPGPSYQDSSPAISYGAAAFNYNQLEGRFK
QLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKG
RMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVET
EDSKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLK
KSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVE
GKRIGKVLDNAIETEKMIEKYESLACDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNT
YRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKGWERLEKAEHER
ELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEA
IETDIAAYEERVQVVVAVASELEAENYHDIKRITVRKDNVLRLWEYLLELLKARRQRLEL
NLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHTLVEADIAIQADRVKS
VNANAQKFADDSEGYKPCDPQVIRDRVAHMEFCYQELTQLAAERHARLEESRRLWKFFWE
MAEEEGWIREKEQILSSDDYGKDLTGALRLVSKHKAFEDEKSGRAGHLQQTVHQGEELVA
AGHFGADKISQRISDVQEQWVALEQLSAARKVRLQEACAVHQFQADADDMDAWMLDALRI
VSSTDVGHDEFSAQALVKKHKDVAEEISSYRPVLDALHEQAKTLPEEQAHSADASGRLTG
IEERYKEVVELTRLRKQALQDALALYKMLSEADACELWIDEKEQWLNGMEIPEKLEDLEV
IQHRFESLEPEINSQASRVAVVNQIARQLIHSGHPSEKEIKTQQDKLNTRWSQYRDLVDQ
KKDALNSTLGVQNYYLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLV
AIEDKLGDLGKEADRLAEEHPDQAPGIKGHLGEIKDVWEEMKGTMCAREESLGEASKLQQ
FLRELDDFQVWLSRTQTAVASEDMPNTLAEAEKLLAQHEGIKNEIRNYKEDYQKMRDMGK
TVTQGQTDAQYMFLSQRLQALDTGWNELQKMWENRKKLLSQSHAYQLFLRDTKQAEAFLN
NQEYVLAHTEMPATLEGAEGAIKKQEDFMTTMDANEEKINGVVETGRRLVSDGNINAERI
QEKVVSIEERHKKNREAARELLTKLKDNQDLQRFLQDCQELSLWISEKMLTAQDMSYDEA
RNLHSKWLKHQAFMAELQSNKEWLEKIQKDGTALVAEKPETEAVVKEKLEFLKKMWDELE
STTQTKAQCLFDANRAELFTQSCADLDKWLSGLQGQIQSDDFGKDLTSVNILLKKQQMLE
SQVEVRQKEVEELRTQAQALSQEGKGSDEVDGLRCGVEKKFHELQEPLKKRRSNLMASRE
IHQFNRDVEDEILWVEERMPMATSTEHGNNLQTVQLLIKKNQTLQKEIQGHQPRYDDIFE
RSIHILKDNSPVSATIRQRLDELKRLWHLIQEEVEKRHRRLEEAHKAQQYYFDAAEAEAW
MSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRALVAAGHPESE
RISMRQSQVDKLYAGLKDLSEERRGKLDERSCLFQLNREVDDLEQWIAEREVVAGSHELG
QDYEHVTMLQERFREFARDTGNIGQERADTVNKMADELINSGHADAATIAEWKDGLNEAW
ADLLELIDTRTQILAASYELHKFYHDAKEVLGRILDKHKKLPEELGRDQNTVEALQRMHT
TFEHDIQALGTQVKQLQEDAVRLQSAYAGDKAEDIQRREAEVLEAWRSLLEACDGRRVRL
IDTNDKFRFFSMVRDLMLWMEDVIRLIDAQEKPRDVSSVELLMNNHQGIKAEIDARNDSF
TTCVELGKTLLSRKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDAG
VAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFAALERLTTMELLEV
RRQQEEEERKRQAQPVEAPPGDTASPQQRECEQVSQNGPPPEQDSPREDTGGVDVVNGVA
EPSPSSSPTGSRKGKAGQAATLPTKSQDTASAQIEGFLNRKHEWEGHNKKASNRSWHNVY
CVINNQELGFYKDSKSASQGIPYHGEVPISLKESTCEVALDYKKKKHVFKLKILNGNEYL
FQAKDDEEMNSWIQAISCKTPSEISSHSTPASGRTQTLPTSVSMGAESSPGKREKDKEKR
FSLFKKK
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagggctaccagtatgcctggacccctgtctcctggacacatttctcct
gggcatctctcccctgagcacctgtctccagggccaggaccatcgtaccaagactccagt
cctgccatcagttacggcgcagccgcttttaactataaccagctggagggacgatttaag
cagctgcaagatgagcgagaagcagtgcagaagaagacctttaccaaatgggtgaactcc
cacctggcccgagtctcctgccgcatcacagacctctacatggatctgagggatggccgc
atgctcattaagctcctggaggtgctgtctggagagagactgccgaagcccacaaaaggt
cgtatgcgaattcactgtctggagaacgtggacaaagctctgcagttcctcaaagaacag
cgcgttcatctcgagaacatgggctcgcatgacattgttgatggcaaccaccgcctcacc
ctgggcctcatctggaccatcattctgcgcttccagattcaggacattagcgttgagacg
gaagacagcaaagaaaagaagtctgccaaggacgctctgcttctctggtgtcagatgaag
accgcaggttatccaaatgtcaacattcacaatttcaccacgagctggagagacggcatg
gccttcaatgcactcattcacaaacacaggcctgacttgatagactttgacaagctgaag
aaatccaatgcccactataatttgcagaatgcctttaacctggctgaacagcacttgggc
ctcacaaagctgctggaccctgaagatatcagcgttgaccaccctgatgaaaaatcaatc
atcacctatgttgtcacttactatcattacttctccaagatgaaggcactgaaagtggaa
ggcaaacgtattggaaaggtgctagacaacgctattgaaactgagaagatgattgagaag
tacgaatctctggcctgtgacctgctggagtggattgaacagaccatcattatcctcaat
aatcgcaagtttgccaactctctggttggagtgcagcagcagcttcaggcctttaacacc
taccgaacagtggagaaacctcctaagtttacagaaaaaggcaacctggaggtcctgctg
ttcaccattcagagcaaaatgcgagccaacaatcagaaagtctacatacctcgagaggga
aaactcatatcagacatcaacaagggatgggagaggctggagaaggcagagcatgagagg
gaactggctctgaggacggagctgattcgtcaggagaagttggagcagctagcccgccga
tttgaccgcaaggcagctatgagggagacctggctaagcgagaaccagagactcgtctca
caggacaactttggttttgatctgcaagccgtggaggcggccactaagaagcacgaagcc
atcgagacggacattgctgcatacgaggagcgtgtgcaggtggttgtggctgtagcctca
gagctggaggcggagaactaccatgacatcaagcgcatcacagtccgcaaagacaacgtt
ctgcggctgtgggagtacctcctggagctcctgaaagctcgacgccaaagactggaactc
aacctgggcctgcagagagtcttccaggagatgctctacatcatggactggatggatgag
atgaagatgttgctgttgtctcaggactatggaaaacatctgcttggtgtagaggacctg
ctgcaaaaacacactctggtggaggcagacattgccatacaggctgaccgtgtcaaatca
gtcaatgccaacgcgcagaagtttgctgatgactctgaaggctataagccctgtgaccca
caagtgatccgtgaccgcgtggcccacatggagttctgctaccaggagctgacacagcta
gcagcggagcggcatgcacgtctggaagagtcacgtcgcctctggaaattcttctgggag
atggctgaggaggaaggctggattcgtgagaaggagcagattctgtcatcagatgactat
ggcaaggacctgacaggggcactgcgccttgtgagcaagcacaaggcctttgaagatgag
aagagtgggcgtgccggacacctccagcagactgtgcaccagggtgaggagctggtagcc
gctggccactttggtgccgacaagatcagtcagcgtatttccgatgtacaagagcagtgg
gtagcactggagcagctgtcggcagcccgcaaggtccgtctgcaggaggcctgcgccgtg
caccagttccaggctgacgctgatgacatggatgcctggatgttggatgcattgcgcatc
gtgtccagcactgatgtgggtcatgacgagttctcagcgcaggcattggttaagaagcac
aaagatgtggctgaagagatttccagctacagaccagtgctggatgcccttcatgagcag
gccaaaacgttacctgaagaacaggcacactccgcagatgcaagtggccgtctaacgggt
atcgaggaacgatataaggaagtggttgaactgaccaggctgagaaagcaggcactgcag
gacgcactggcattgtacaagatgctgagtgaggctgatgcctgtgagctatggatcgat
gaaaaggagcagtggcttaacggaatggagatcccagagaaactggaggatttggaggtg
attcaacacagatttgagagtctggagccagagattaacagccaggcttctcgggtggcc
gtggtgaaccagatcgcccgccagcttattcacagtgggcacccaagtgagaaagagatc
aaaacccagcaggacaagctcaacaccaggtggagccagtatcgtgacctcgtagaccag
aagaaggacgctctcaactcgactttgggagtacagaattactatcttgaatgcaatgag
accaaatcctggattcgcgaaaagaccaaggtgatcgagtccacccaggatctgggcaac
gatctggctggtgtcatggcacttcagcgcaagctgactggcatggaacgagacctagtt
gctatagaagacaaactgggtgacctggggaaggaggctgaccgattggccgaagagcat
ccagaccaggctcctggcatcaagggccatttgggtgagatcaaagatgtgtgggaggag
atgaagggaaccatgtgtgctcgtgaagagtccctgggtgaggccagcaagctccagcag
ttcctcagggaactggatgacttccaggtgtggctgtcacgcacacagactgctgtggct
tctgaggacatgcccaacactctggctgaggccgaaaagcttttggcacagcatgaggga
atcaagaatgagatccgtaactacaaggaggactaccagaaaatgcgtgacatgggcaag
acagtgacccagggccagacagatgcccagtacatgttcctgagtcagaggctgcaagcg
ctggacactggctggaacgagctccagaagatgtgggagaacaggaagaaactcctgtcg
cagtctcatgcctaccagctcttcctccgggatactaagcaggctgaggctttcttgaac
aatcaggaatatgtattggcccacacagagatgccagctacccttgaaggagcagaaggg
gctatcaagaagcaggaagacttcatgacaaccatggatgccaacgaggaaaagattaat
ggcgtggtggagacgggccgcaggctggtcagtgatgggaacattaacgccgaacgtatc
caagagaaagtggtctctattgaggaaaggcataagaagaatcgtgaggcagcccgtgag
cttctcacaaagctgaaagataaccaagatctccagaggttcctccaggactgccaggag
ttgtccttgtggatcagcgagaagatgttaacagcacaggacatgtcctacgatgaagca
cgcaacctgcacagcaagtggctgaagcaccaggctttcatggcagaactgcagtccaac
aaagaatggctggagaaaattcagaaggatggcacagcactggtggccgagaagccagag
actgaggcggtggtaaaggagaaactggagtttctgaagaagatgtgggatgagctggag
tcaacaacccagaccaaggcccagtgcctgtttgatgccaacagggccgagctgttcaca
cagagctgcgctgacctggacaagtggctctctggtctgcagggccagatacagtcagat
gacttcggtaaagacctgactagtgtcaacatcttgttgaagaaacagcagatgcttgaa
agccaggtggaagtgaggcagaaggaggtggaggagctgcgcacacaggcccaagcactc
agccaggagggcaagggatcagatgaagtggacggtctgcgctgtggcgtggagaaaaag
ttccatgagctgcaggagccactgaagaaacgccggagcaacttgatggcctcacgtgag
atccaccagttcaaccgtgacgtggaggatgagattctctgggtggaggagagaatgcca
atggccacatctacagaacacggcaataatttgcaaactgttcagcttctcattaagaag
aaccagactcttcaaaaggagatccagggtcaccagccacgttatgatgacatttttgag
aggagcatacacattttaaaggacaacagtcctgtcagtgcaacaatccgccagcggtta
gatgagctaaagcggctctggcacttgatccaggaggaagtggaaaaacgccacagacgc
ctagaggaagcgcacaaagcccagcaatactactttgatgcagcggaggctgaggcatgg
atgagcgagcaggagctgtacatgatgtcagaagaaaaggcaaaggatgagcagagctct
gtggctatgctgaagaaacaccagatcctggagcaggcagtggaggactatgctgagaca
gtgcaccaactctctaaaaccagcagggccttagtggctgctggacacccagaaagtgag
agaatcagcatgcgacagtctcaagtggacaagctgtatgccggtctgaaggacctgtct
gaagaaagacgtgggaagctcgacgagagatcctgcctgttccagctgaaccgtgaggtt
gatgatttagagcagtggatcgcggagagagaggtggtggcaggttctcacgagcttggt
caggactatgaacatgtcactatgctacaggagcggttccgagagtttgcccgtgacaca
ggaaatattggccaggagcgtgctgacacagtcaacaaaatggcagatgaactgatcaac
tcgggtcacgcagacgccgccaccattgctgagtggaaggatgggctcaatgaggcttgg
gcagacctgctggagttaatcgacactcgcacgcagatcctggctgcgtcctatgaacta
cacaagttctaccatgatgccaaggaggtgcttggacgcatcttagacaaacacaagaag
ctcccagaagagttaggcagagaccagaacactgtagaggcactgcagagaatgcacacc
actttcgaacatgacatacaggctttgggaacacaggttaagcagctgcaggaggatgca
gtacgtttgcagtcagcctatgcaggagataaggctgaggatatccagaggcgtgaggcg
gaggtgctggaggcctggcgttctctgctggaagcgtgcgacggccgccgtgtgcgtcta
atcgacaccaatgacaagttccgcttctttagcatggtgcgcgaccttatgctttggatg
gaggatgtcatccggctcattgatgcacaggagaaaccaagggatgtttcatccgtggag
cttttaatgaacaatcaccaaggcatcaaggctgaaattgatgctcgcaatgacagtttc
acaacctgtgtcgagttgggaaaaactctactttcacgaaaacactacgcttctgaagag
atcaaagaaaagttactccagctgacagacaagaggaaagagatgattgacaagtgggaa
gaccgatgggaatggctgcgactggttctggaggtgcaccagttctcacgggatgcaggt
gtggctgaggcatggctgctgggccaggagccatatctgtccagtcgggagatgggtcag
agtgtggatgaggtggagaagctcatcaagaggcacgaggcgttcgagaagtcagccgcc
acttgggaggagcgttttgctgctctggagaggcttaccactatggaattactggaagtg
agaagacagcaagaggaagaggaaaggaaaagacaggcacaacctgtagaagctccccct
ggtgacacagcatcaccacaacagagggagtgtgagcaggtatctcagaatggaccacca
ccagagcaggactctccccgggaggacacaggaggagttgatgtagttaatggggtggca
gagcccagtccaagctcctccccaacaggaagtcgcaagggaaaagcaggtcaagctgct
acactaccaaccaagtcccaggacacagcttcagcgcagattgagggattcctgaaccgc
aaacatgagtgggagggtcacaacaagaaagcctccaatagatcttggcacaatgtctac
tgtgtgattaataaccaagagttgggcttttacaaagacagcaaaagtgctagtcaggga
ataccataccatggtgaagttcccattagtctgaaggaatccacatgtgaggttgccctt
gactacaagaagaagaaacatgttttcaagctcaaaattttaaatgggaatgagtatctc
ttccaagccaaagatgatgaggagatgaactcatggatccaggcgatctcatgcaagaca
ccctccgagatcagcagccatagcactcccgcctcaggacgcactcaaaccctgcccacc
tctgtaagcatgggtgctgagtccagccctggcaagcgggagaaagacaaagagaagcgc
ttcagcctcttcaagaagaaatag
DBGET
integrated database retrieval system
