Ictalurus furcatus (blue catfish): 128604134
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Entry
128604134 CDS
T09387
Symbol
thbs2a
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128604134 (thbs2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128604134 (thbs2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128604134 (thbs2a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128604134 (thbs2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128604134 (thbs2a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128604134 (thbs2a)
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128604134 (thbs2a)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Phagocytosis
Opsonins
128604134 (thbs2a)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128604134 (thbs2a)
Exosomal proteins of colorectal cancer cells
128604134 (thbs2a)
Exosomal proteins of bladder cancer cells
128604134 (thbs2a)
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128604134 (thbs2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
Laminin_G_3
TSP1_ADAMTS
TSP1_CCN
EGF
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
128604134
NCBI-ProteinID:
XP_053474965
LinkDB
All DBs
Position
29:4883341..4932147
Genome browser
AA seq
1174 aa
AA seq
DB search
MILRIIHILLPVLLLRTTAIPQGGQVDNESSFNLFEISNITRKTIGAKVFKGHEWDSPAY
RFIRFDHIPPVSPSVLQQLLRQIQNNVGFVFVASIRQDRASRGTLVGLEDSGGRRHFEII
SNGRANSLDLVYWVEGSQNVVSFEDVDLSDSQWKNITLHVHGENANLYVDCSLIDSFTLD
ESFYDHLQADSSYMYVAKGSNRESHFRGLLQNVCFIFDTPVEDILRKKGCEISKPDDMHM
VDKGEDIMEVSPAISTNFIRQDMEEINTCKHSCEQLSSMLQELNGLRIVVGNLMDGLQKV
SEENSVMKKALGNIKNIKHNRMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCPP
VACAVPVFLDGECCPMCLPKDSEDGWSPWSEWTECTVTCGMGTQQRGRSCDATSNPCSGP
SIQTRTCSLAKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNSPVPQLGGMDCEG
SGRETQRCDSKPCPVDGRWGPWSPWAICSLTCGGGVRSRIRVCNSPLPQYGGRWCSGEAE
QTGTCNKQDCPADGCLSNPCFGGVECTSTPDGSWECGPCPAGFWGNGTFCEDVNECDLVP
DLCFKVTGKQRCMNTDPGFHCLPCPARYKGNQPFGMGVEFARNNKQICEPDNPCKDKTHN
CHRFAECIYLSHFSDPMYKCHCKIGYAGDGFICGEDSDLDGWPNQNLVCRANATYHCKKD
NCPSLPNSGQEDFDKDGQGDACDKDDDNDGIMDERDNCPLLFNPRQFDYDKDDVGDRCDN
CPYEHNPAQIDTDNNGEGDACAVDIDGDGILNENDNCVYGYNSDQKDTDMDGVGDQCDNC
PLLHNPDQADTDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDF
DDDNDGIPDDKDNCRLVANKEQMDSDGDGRGDVCQDDFDNDSIPDILDMCPENNAISITD
FRKFQMVHLDPKGTTQIDPNWVVKHQGKELVQTANSDPGIAVGYDEFNAVDFSGTFYVNT
DRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEEKPSKAFGISGVSLKVVNSTTGSGENL
RNALWHTGDTPGQVHTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADSG
PVYDKTFAGGRLGLFVFSQELVFFSDLKYECQDN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggataattcatatcttgctaccagtgctgttactgcgcaccacagcaata
ccacaaggaggccaagtggacaatgaatccagttttaacttgtttgagatcagcaacatc
accagaaagacgattggcgctaaagtcttcaagggtcatgaatgggattctccagcgtac
cgcttcatccgctttgaccacattcctccagtcagcccctctgtcctccagcagctccta
agacagatccagaacaatgtcggctttgtgtttgtggcttccatacgtcaggatcgagcg
tctcgtggcactcttgtgggcttagaggattctggtggtcgtcgacatttcgagatcatc
tctaatggacgtgccaatagtttggacctggtctactgggtggagggctcccagaacgta
gtgtcctttgaggatgtggatctgtcagactcacaatggaagaacatcacattgcatgtg
catggagagaatgccaacctttatgtggactgcagcctcattgatagctttaccctggat
gagtctttttatgaccacttgcaagctgacagcagctacatgtatgtggccaagggatct
aacagggagagtcacttcaggggtttgttgcagaatgtttgtttcatctttgatacacct
gtcgaagatattctgagaaaaaagggctgtgagatttccaagcctgatgacatgcacatg
gtagacaagggtgaagacatcatggaagtcagtccagccatttctactaactttatcagg
caagatatggaggaaataaacacgtgtaagcactcgtgcgaacagctcagctccatgttg
caggagctcaacggactccgcatagtggtcggaaacctaatggatggcctacagaaagtg
agtgaggaaaactcagtcatgaagaaagctctgggcaacattaagaatatcaaacacaac
cgtatgtgctggcaagatggccgcttgtttgaggataaagaagactgggtggtggatagc
tgcaccaaatgcacttgtcaggagtcgaagattgtgtgtcaccagattacttgtcctcct
gtggcctgtgccgttccagtgttcctggatggagagtgctgtccaatgtgtctacctaag
gacagtgaggatggctggtcaccctggtctgagtggacagaatgcacagttacatgtggt
atgggcacccagcagagaggcaggtcatgtgatgcgaccagcaacccctgtagtggtcct
tctatccagacgcgcacatgtagcttggctaaatgtgacagtagagttcgtcaggatgga
ggatggagcctgtggtctccttggtcctcctgttcagtaacatgtggtgaaggccagatt
accagaattcgccactgcaactcaccagtaccccagttgggggggatggactgtgaagga
agtggcagagagacacaacgttgtgattccaagccatgccctgttgatggaagatggggc
ccatggtccccatgggctatatgctcattgacatgtggtggaggagtgcggagtcgaata
cgtgtgtgtaatagccctctgccacagtatggaggaagatggtgctcaggagaagccgaa
cagacggggacatgcaacaagcaggattgtcctgctgatggctgtctgtccaatccctgc
tttggaggggtggaatgcaccagcacacctgatggctcatgggaatgtggtccctgcccc
gctggtttctggggcaatggaacattttgcgaggatgtaaatgagtgtgatctggtgcct
gatttgtgctttaaagtcactgggaaacagcgctgcatgaacactgacccaggattccac
tgccttccttgtcctgcccgttacaaaggaaaccagccctttggcatgggagtggaattt
gccaggaacaataagcagatttgtgaacctgacaacccttgcaaggacaagacacataat
tgtcatagatttgctgaatgcatctaccttagccacttcagtgatcctatgtataaatgt
cactgtaagattggctacgcaggagatggctttatctgtggagaagattctgatctggat
ggttggcccaaccagaacttggtgtgtagagctaatgccacctaccattgcaagaaggat
aattgtcccagccttccaaattctggccaggaggactttgacaaggatggacaaggcgat
gcatgtgacaaggatgatgataacgatggaattatggatgagagggacaactgccctctg
ctgtttaatcccaggcagtttgattatgataaggatgatgtgggtgatcggtgtgataac
tgcccatatgaacacaatccagctcaaatagatacagataacaatggagaaggagatgcc
tgtgctgttgacattgatggggatggcatcctaaatgaaaatgacaactgcgtgtatgga
tacaacagtgatcagaaggacaccgacatggatggagtgggagaccagtgtgacaattgt
cctctgcttcataaccctgatcaggctgatacagataatgaccttgtaggagatcagtgt
gacaacaaccaggatattgatgaggacggccatcagaacaacctagacaattgcccttat
gttcctaatgccaaccaggcagatcatgacaaggatggaaaaggagatgcttgtgacttt
gatgatgataatgatggaattcctgatgacaaagacaactgcaggctggtagccaacaaa
gaacagatggactcagatggtgatggtcgaggtgatgtctgccaggatgattttgataat
gacagcatccctgacattttggacatgtgcccagagaacaatgctataagtataaccgac
ttcagaaagttccagatggtgcatttggatcccaaagggaccactcaaattgatccaaac
tgggtagtcaagcatcagggtaaggaactggtccagactgccaattcagaccctggaatt
gcagtaggctatgatgagttcaatgctgtggacttcagcggcaccttctatgtgaacaca
gacagagatgatgactatgctggctttgtgtttggttaccagtcaagtgggcgcttctat
gtggttatgtggaagcagatcacccaaacatactgggaagagaagccatcaaaggccttt
ggaatctcaggtgtctccctcaaagtggttaactccaccacaggcagtggggaaaactta
cgcaatgccctctggcacactggtgacacccctggccaggttcacacactgtggcatgac
cctaagaacattggctggaaggactatactgcatataggtggcatctcattcatagacct
aagactggattcattagagtggtagtatatgaggggaaacagatcatggcagactctggc
ccagtctatgataagacatttgcaggaggacgattggggttatttgtcttctcgcaggaa
ctggttttcttttctgaccttaaatatgaatgtcaagataattga
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