Ictalurus furcatus (blue catfish): 128604188
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Entry
128604188 CDS
T09387
Symbol
arhgef40
Name
(RefSeq) pleckstrin homology domain-containing family G member 4B
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128604188 (arhgef40)
Membrane trafficking [BR:
ifu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128604188 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
IQ_SEC7_PH
PH
DHC_N2
DUF8246
TACC_C
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-GeneID:
128604188
NCBI-ProteinID:
XP_053475063
LinkDB
All DBs
Position
29:8892507..8942090
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AA seq
1786 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFIPAKHLLH
RLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSNDFYLQVVPFSTRCPRLA
LKCLALGGRNVQEVLVPESQHPLVFTAEWLHCINKERGCKREGGGGLDTCLVSTSDGVVR
IPWDEVVYPKLLHNPTDLELPSTHPPALDYLSPNTGSLGWCSSPGDPDAWSWDEEDDLPP
DGNEADSDSMLRHLRQASDGCGDYVELLEPRGGPDGGTDSKQRYLEMHGICKTKTLPLCR
RSKAFRIRRGKAWGYAKTEISGRMGSLRRRDSNNSGKNIGVARKDLVNSRPPPRVIDLVR
ERQPSHQCIQDSDEGGGDAVVMDNQDLYLEGPSKERRPGVGEERKGAGSTLPWEECHRGR
ASSSELSSRSKYINRIDIHTTGTIGADQSDQDQGFHSDCVFEDDKSMAEGETLRNATAGV
NNVSDCSGHLVNGSKAKLNTPPDSSQNRELNSSHNDQNSTKNSGNSKGQKGKCNEHRKPE
KNLSQPGTDNIAGERQVGKLEEHVCPRGKDVKVGGSRAPRRRRKAKGGKRKGKSGGRGNP
KNKEDPDSSTKGQKKASQLPETSDSPAKSPLFKDSHSDEGKNTVKKLANGHEVEPKSTDG
AGEKQPDGQHEIFPDAKAQSEAASPDHSPEEIIPSASSDQSKAPSPKAPPLLRELNEDLL
QSGKFIVTGTVDRLGRGLVITEAHVPEEGHSLSDIVQLLSCYYTITRPSAREKGLTVLVD
SRQASPSELCFSALSSFKAQIAAGLGCVLILTEEEQESASYTLDGIEVHTVKGTGVLQQY
VDRQQLTKELDGDFEHSHNDWLSFRLSLEHLTERCESVLSLLEDALMSMGTEPLPDCIKS
VPLSVEKHKQLMTGVLSDQRLTELQRRGGAWLAGLANGTSRLAHRSPDCSAALAATSSLY
DSVDDSLHRLVRVSNQRSHDLEALSRLATLVDKLDKCENEIDRVQEQLEEYKDPPQSLSR
LSLKQQKFKSFRESAMELHSETLVVLGEVESWSELEWGGLTAVLKRLPSIREKVRGMSHC
LSDCWTQLDNTQRLLSTLTEASQWCDVVSSSSPHSTPSSPLSSLPPIPPSRFQDARALAL
ELGGGALLDLWAQTLERYQRTLAHFKTRMLQAERGMPTNHGQDPSVGMAQAPKTPISTTS
SLWEIEGEGDGEWCGGGGEAGLQSWGSLASLFRPQNCSTLKIGEEKKKEGTAGAAGGGKF
LQNLLNPSKKSPTEAPLPPKPPRRRHPSFDLQALLAPRRSATASPKPAEAPLAMSSRSSP
LSWLGKKAIAEPILTAGIATAVPGWRDEKVGGGVGGGGVLIRGVEVSSKEVADHTGLTRQ
HVLLGRTDRETGVERPGTTAQSKLYLQWCRLVNSERQYVALLKAVEETYLPLLDSTDTPL
CLRGKADSIFSNWSSLATFHSQLLLPAIEGALSQTLQQTDCFSKYRDQLLQYSHYIRMKP
ELDSLLVNQAADFFKVKLSSSPVLSTISFPQCLAVPTQRLQHYCEILEELGGVNPGPGSA
LSIIRHAQRHGEDLRISDLITGCPVPVAERGDLVRQGELYVCPGGRRKKTGIRTVFLYQH
YVILTKHKTPSQGCSAYTFKNSIKTGEMGLTQSVGEEGLRFEVWVRQTSRTKYCLTLQAS
SSEDREAWTHDIAQLLWTHAIHNTELCLKESLCMGVSSKLLLDVTGTQTSELDSGFSLND
RVQSSCSDSSSVGSQKEGGSPSIARDAKKDSAQTVHTQSSSPSTAV
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaggcggtggaggactgtgtgcaaggggcgctctcctccctctatcctcca
tttgagagcactgcacccccccttctatcccaggtcttttctgtcttggagtccacctat
caacatgacagtttaaggtatctgctggatttcttcatcccagccaaacatcttctgcac
agactccagcagcatgcttgttctcagtatttgggctgtttgttcctccactcgggttgg
cccctttgtttgggtgagaaggtggtggtccagctttctactcttgactggaggctcttg
cgaagcaacgacttctacctgcaggtggtgccattctccacgcgctgtccccgcctggcc
ctcaagtgtctagctctgggtggccgtaatgtccaggaggtgttggttcctgaatctcag
caccctctggtgtttacagcagagtggctgcactgcatcaacaaggaacgtggttgcaag
agagaaggtggtggtggtttagatacttgtctggttagtacttctgatggagtagtacgt
attccatgggacgaggttgtttacccaaaactgctacacaaccccaccgacctggagctt
ccttccacacacccccctgcccttgattacctttctccaaacacagggagtctgggatgg
tgctcttcccctggagatcctgatgcctggtcctgggatgaagaggacgatcttcctcca
gatggcaatgaggctgatagtgactctatgctgcggcacctcagacaagccagtgatgga
tgtggggattatgtggagctcctggaacctcgaggaggtccagatggtggcactgattcc
aagcagcgctatttggagatgcatgggatctgcaaaaccaaaacattgccgctatgtagg
cgaagcaaggcctttcgaattcggcggggtaaggcctgggggtacgcgaagactgagatc
agtggaaggatggggagcttacgtaggagggacagcaacaacagcgggaagaatattgga
gttgctcgcaaagatttggtcaactctcgacccccacctcgagtcattgatttggtgcga
gagagacagccatcgcatcagtgcattcaggactcagatgagggtggtggagatgcagta
gtcatggataaccaggacctttatttagagggtccatccaaggagagaaggcctggtgtg
ggtgaggagaggaaaggagctggaagcacactaccctgggaagagtgccatagaggaagg
gccagcagcagtgagctgagctctagaagtaaatatatcaacagaatagacattcatact
acaggaactataggggcagaccaatcagatcaggatcaaggattccactcagactgtgtt
tttgaggatgataagtcaatggctgaaggtgaaacattgcgtaatgcgacagcaggtgtg
aataatgtgtctgattgtagcggacatttggttaatggatcgaaagcaaagcttaacaca
ccaccagattcatctcaaaacagggagttaaactcttcccacaatgatcaaaattcaacc
aaaaactcaggaaactccaaaggacaaaaaggaaaatgtaatgaacataggaaaccagaa
aaaaatctttctcaaccaggtactgacaacattgctggtgaaaggcaagttgggaaattg
gaggaacatgtgtgccccaggggaaaggatgtcaaagtgggaggatctcgagcacccagg
agaaggaggaaagctaagggtggaaaaaggaagggcaaatctggtggccgtggtaaccct
aaaaacaaagaagaccctgatagttccacaaagggtcagaagaaagcaagccaactaccc
gaaacatctgattcaccagctaaatcacctctcttcaaagatagccattcagatgagggt
aaaaatacagtaaagaagctagcgaacggtcatgaagtagagccgaaatctactgatggg
gctggagaaaaacaaccagatggccaacacgaaatcttcccagatgctaaggctcaatca
gaagcagcttcacctgatcattcaccagaagagattataccatcagcatcttctgaccag
tcaaaggcaccatctccgaaagcccctcctctgcttagagagttaaatgaagatctgctc
cagtcaggaaagttcatagtcacaggtactgtggatagactgggacgtgggttggttatt
acagaagcacacgttcctgaggagggtcatagtctcagtgacattgtgcagctcttatcc
tgttattacaccattaccagaccttcagccagagaaaagggcttgacagtgctggtggac
agtaggcaggcttcaccttctgagctttgcttttctgccttgagttcattcaaggctcag
atagctgcaggccttggctgtgttctcattcttacagaggaagagcaagaatcagcctca
tatacgctggatgggatagaggtacacacagtaaaaggaactggagtccttcagcagtat
gtggatagacagcagctgactaaagaattggatggagactttgagcactcacataatgac
tggttatccttcagactgagcctggaacatttgactgaacgctgtgagagtgtcctctct
ctgttggaagatgcactaatgtctatgggcacagaaccactgcctgactgtattaagtct
gtaccactaagtgttgaaaagcacaagcagctgatgactggtgttctgtctgaccaacgg
ttgacagagttacaaagacggggtggggcttggctggctggactggctaacggaacatcc
agattggctcacaggtcaccagactgcagtgctgctttggccgcaacctccagtctctat
gacagtgtcgatgattcactccatcgactggtgcgtgtttctaatcagagaagtcatgac
ctggaagcactcagtagactggcaactctagtggacaaactggataagtgcgagaatgaa
atagaccgtgtgcaggagcaactggaggaatataaggatcctcctcaatcactaagccgc
ctctcactcaaacagcagaagttcaaaagcttcagggaatctgccatggaacttcacagt
gagacactagtggtgctgggtgaggtcgagagctggtctgagctggagtggggaggcctg
acggcagtccttaagcgactcccatcgataagagagaaagtgagaggaatgtctcactgc
ctgtctgactgctggacccaactggacaacacccagagactactgtccacacttactgag
gcctcccagtggtgcgatgtggtctcttcctcctctccccattccacgccttcctctcct
ctgtcctctctccctcccatccctccatcccgtttccaagatgcacgagctttggccctt
gagcttggtggtggtgctctgttggacctgtgggcccagactctggagcgttaccagcgc
acattagcacacttcaagactcgcatgcttcaggctgaacgtggcatgcccaccaaccat
ggtcaggatcccagtgtgggcatggcacaggcgccaaaaacacccatctccactacctct
agtttgtgggagatagagggagagggagatggagagtggtgtggaggaggaggtgaagca
gggctgcagtcctggggctcactggcctcactgttccgtccacagaattgctctacgctg
aagataggagaagagaagaagaaagagggaactgcaggagctgcggggggagggaagttc
ctgcagaacttgctaaacccaagcaagaaaagtcccactgaagctcccctccctccgaaa
ccacctcgcagacgtcacccaagctttgacctccaggccttgctggcgccccgtcgttca
gctacagcatcaccaaagccagcagaggctccacttgccatgagcagccgctcatctccg
ctgtcctggctggggaagaaagccatagctgagcctatcctcacggcagggattgcgaca
gctgtaccaggatggagggatgagaaagttggaggaggggtaggaggagggggtgtgttg
atccggggcgtggaggtcagcagtaaggaggtggcagatcatacggggctcaccagacag
cacgtactgcttggccggactgatagagagacaggagtggagaggcctggcactactgca
cagagtaagttgtatctgcagtggtgtaggctggtcaattcagaaagacagtacgtagct
ctactgaaggctgtggaggagacttacctccctctgctggatagtactgatacaccactc
tgtctgagaggaaaggctgactcaatcttctccaactggagcagccttgccacttttcat
tcacagctactcctccccgccattgagggtgccctctctcaaacgctacagcaaactgac
tgcttcagcaaatatagggatcaattactgcaatactcccactacatccgtatgaagcca
gagctggactccctgctggtcaaccaagctgccgatttcttcaaggtaaagctgtccagc
tctcctgtgctctccaccatctcctttcctcagtgccttgctgttccaactcaaagacta
cagcactactgcgagatccttgaggaactgggaggtgtaaaccctggacccggctctgcc
ctctccattatcagacatgcacagcgccatggagaggacctgaggataagtgacctcatc
actggctgtccggtacctgtggcagaacgtggggatttggtacgtcagggcgagctatat
gtctgtccaggcggacggagaaagaagacaggcatcaggactgtgtttctctaccagcat
tacgttattctcaccaaacacaaaactcctagccaaggctgcagtgcatacacctttaaa
aacagcataaagacaggagagatgggtttgacccaaagcgttggagaggagggtctgagg
tttgaagtttgggtgagacagacatctcgcaccaaatactgtctcactctccaggcatca
tcttcagaggacagagaagcctggacgcatgacattgcccagctcctgtggactcatgcc
atccataacacagaattgtgtctaaaggaatctctgtgcatgggagtgtccagcaagttg
ctgctggatgtgacgggaactcagacatctgagctagactcaggcttcagccttaatgac
agggtccagagtagctgttcagactcttcctcagtgggaagtcagaaagaaggaggttct
ccctccatcgcaagagatgcaaagaaagattcagcacaaactgtccatacacaaagctca
tcaccatcgaccgccgtttga
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integrated database retrieval system
