Ictalurus furcatus (blue catfish): 128604195
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Entry
128604195 CDS
T09387
Symbol
pdlim3a
Name
(RefSeq) PDZ and LIM domain protein 3a isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128604195 (pdlim3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128604195 (pdlim3a)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128604195 (pdlim3a)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
PDZ_Tricorn
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
128604195
NCBI-ProteinID:
XP_053475076
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Position
29:complement(1836635..1851441)
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AA seq
438 aa
AA seq
DB search
MAHSVILDGPAPWGFRLIGGKDFNQPLTIAKISAGSKASMVDLSPGDIILAIDGISTSNM
MHCEAQTRMKQATRQLSLTVQRPETKLWTPRVREDGRAHPFKMNLEAERQEYRPIGTGHN
RRAAPFVAAANIDDRRQVVSSAYNSPIGLYSSGNIQDALQGQLRGLIQSKPESPRTLTSI
EESDVYRMLQQEEGETEPHEPRQSGSFKALQDYINSEGTLPVVTKSVQAPITKPLSPGGN
LHKLPMCDKCGNGIVGMVVKVQDKFRHPGCFVCSDCEENLKQKGYFFIDDEIYCETHAHA
RAKPPESPDLRPPDCSNENSRICSCHFVGGMKSAAPSVFTWSEKKLSCFTASHTDLKEEP
EEKDIVSEAPGSAASLSPAGGEEKITHFKQEEAETEISPFQTSPSPAGHQRKSDQNVSES
VCNQSPFRAALSAMNIHE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcacacagtgtcatactggatggaccggcaccatggggcttccggctgattggagga
aaggatttcaaccaacctctcactatcgccaagatatctgcaggcagcaaggcctccatg
gtagacctctctcctggtgatattatcctggctatagatggcatctccaccagcaacatg
atgcactgtgaagctcagactcgcatgaagcaggccacacgacagctcagcttaaccgtc
cagaggccagaaaccaaactgtggacacctcgagtaagagaagacggcagagcgcatccg
tttaaaatgaacctggaggcagagagacaggagtacagaccaataggcacgggccataac
cggcgagccgcgccctttgtggcggcggccaacattgacgacaggcgacaggtggtcagc
tctgcctacaactctcccattggtctttattcttcaggcaatatccaggatgccttacag
ggtcagctcagaggcctaatacagagcaagccagagagtcccaggacgctcacgtctata
gaagaatcagatgtataccgcatgctacagcaggaagagggagagacggagcctcatgaa
ccccgccaatcaggatccttcaaagccttacaggattacatcaacagtgagggaacactt
ccagtcgtgacgaagtcggtgcaagcgcccatcactaagcctctctcgcctggaggaaac
ctgcacaaactgcccatgtgtgacaagtgcggtaacggcatagttgggatggtagtgaaa
gttcaagataagtttcggcaccctggctgtttcgtctgctcggactgtgaggagaacctg
aagcaaaaaggctactttttcatagatgacgagatctactgcgaaactcacgcacacgct
cgcgcaaaacctcccgaaagcccagacctgcgtcctccggattgttccaacgaaaactcg
aggatctgcagctgtcactttgtgggcgggatgaaatccgcagctcccagtgtgtttaca
tggagtgagaagaaactgtcctgcttcacagcttcacacaccgacctgaaggaggaacct
gaggagaaggacattgtgagtgaagctccaggaagcgccgcatctctcagccctgcagga
ggagaagagaagatcactcacttcaaacaggaagaggccgaaacggagatcagcccgttt
caaacaagtccatctccagcaggacatcagaggaaatctgatcagaatgtgtctgagagt
gtgtgcaaccaatcacctttccgtgctgcgctctccgcaatgaatattcatgagtag
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