Ictalurus furcatus (blue catfish): 128604202
Help
Entry
128604202 CDS
T09387
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128604202 (ddx21)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128604202 (ddx21)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128604202 (ddx21)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
Pre-60S particles
Helicases
128604202 (ddx21)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128604202 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Gly_acyl_tr_C
Motif
Other DBs
NCBI-GeneID:
128604202
NCBI-ProteinID:
XP_053475086
LinkDB
All DBs
Position
29:complement(7321345..7347967)
Genome browser
AA seq
763 aa
AA seq
DB search
MPSLVLSSSENGITMNDVDEGLDSNLETKKKKDKAKKKKTTVTEESADCDPPAPKKVKRE
KMDTANGTVQKSPDVNGNFGRKPVEVNNLHSSDELVNPEGEQPEKKKKKKKKKAVTPDET
TVDQAPSVTGIGTKSTKTQAKVNGHFTDSTSTQSNEDSNSESEKDVETPEQREGAFSNFK
ISQDTIKLLQARGVTHLFDIQVKTFNSVYDGEDVVGQARTGTGKTFSFAIPLVEKLQSGT
EDKKRGRVPKVLVLTPTRELAIQVAKDFKDITKKLSVHCFYGGSSYNPQVDAIRSGIDVL
VGTPGRIKDHLQNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEEILSASYKKGGENNPQTL
LFSATCPPWVYDVAKKYMRSHYVHVDLIGKKSQKAATTVEHLAIACHWSQRAAVIGDVVQ
VYSGSHGRTIVFCETKKEAHELSMNTSIKQSAQSLHGDIPQKQRELTLKGFRNGNFEVLV
ATNVAARGLDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEDQLRYV
EQKAGITFKRVGVPTANDIIKSSSKDAVRFLDSVPPAAVEHFRAAAERLIEERGAVESLA
AALAHISGATSLEQRSLLSSDAGYTTLVLNCSQEMHNIGFAWRGLKEQLGEEIDDKIKRM
TFLKSKKGVCFDVPADKVKEIQDKWQDGRRWQLTIATELPELEESMRNRGERGSGARGHG
GFRSGFRGGNNRSGGRGGGGRGGGRGRGRGGAQKRNFSQAFDY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgccatcattagttctaagcagcagtgagaacggtatcaccatgaacgacgtggacgag
ggattagacagcaatttggaaaccaaaaaaaagaaagacaaggccaagaagaagaaaacc
acagtgactgaagaatctgctgactgcgatccaccggctcccaaaaaggtcaaacgagaa
aagatggacacagccaacgggacagtgcagaagtctcctgacgttaatggaaactttggg
aggaaaccagttgaagtgaacaaccttcattccagtgacgagctcgtgaacccggaaggc
gagcagccagagaagaagaagaagaagaagaaaaagaaagcagtgacaccagatgagaca
acagttgaccaagcaccgtctgtcactggcattggcacaaaatcaacaaagactcaagca
aaagtcaacgggcatttcaccgactctacctcgacacagtccaatgaagactccaacagt
gagagtgaaaaggatgtggagacgccagagcaaagagagggagccttctctaatttcaaa
atctcacaggacaccattaagctactccaagcacggggtgtgacgcatctgtttgacatt
caagtgaagaccttcaactctgtgtacgatggggaggatgtggttggccaagctcgaaca
ggcacaggaaagactttctcttttgcaatcccactggtggagaagctacagtcaggaact
gaggacaaaaaaagagggagagtgccaaaggtgctggttctcacgcctactcgagagctg
gcaattcaggtggctaaagacttcaaggatatcaccaagaagctctctgttcactgcttc
tatggaggaagctcctacaaccctcaagtggatgccattcgcagtggcatcgatgttctg
gttggcaccccaggccgaataaaagaccaccttcagaacaacaaactggatctgtcccag
ctaaaacatgtggtgctggacgaagtggaccaaatgcttgatatgggctttgctgaacaa
gtggaggagatcctctctgcttcctacaaaaaaggtggtgaaaacaaccctcagactctg
ctcttttctgccacttgccctccttgggtttatgacgtggcaaagaaatacatgcgctcc
cattatgtccatgtggatctcatcggcaaaaaatctcagaaagcagccaccacagttgag
catctggccatagcatgccattggtctcagagggcagcagtgattggtgatgtagtgcag
gtgtacagcggcagccacggacgcaccattgtcttctgcgagaccaagaaggaagcacat
gaactgtccatgaacacctccatcaaacagagtgcgcagtctttgcatggagacattcct
cagaagcaacgtgagctcacactgaagggcttcaggaacggcaactttgaggttctggtg
gccaccaacgtggctgcacgaggccttgatatcccagaggttgatttggttgtacagtgt
tctcctccaaaggatgttgagtcatatattcaccgctctgggcgaactggcagagctgga
agaactggcatctgcatctgtttctatcagcgcaaagaagaagaccaactgcgatatgtg
gagcagaaggctggcattactttcaagcgtgttggtgtcccaactgctaatgacatcatc
aaatcctccagtaaagatgcagtcaggttcctggattccgtacctcctgcagctgtagaa
catttccgtgcagcagccgagaggctaatcgaagagcgaggtgcagtggagtcgctagct
gctgctcttgcacatatatcaggagccacgagtctggagcagagatcgctcctcagctca
gatgctggttataccacattagtgctcaactgctctcaggagatgcataacattggcttt
gcctggcgagggctgaaagagcagctcggggaggagatcgatgacaagatcaaacgaatg
accttcctcaagagtaaaaaaggggtttgctttgacgtcccagccgataaggtgaaagaa
atccaggacaaatggcaagatggccgcaggtggcagctgaccatcgccactgaacttccc
gaattggaggaaagcatgcggaaccgtggagaacgagggtctggtgcaagaggtcatggt
ggattccgcagtggcttccgtggtggcaacaaccgaagtggaggaagaggaggaggggga
agaggtggaggaagaggtagaggaagaggtggtgctcaaaagaggaacttcagccaggct
tttgattattaa
DBGET
integrated database retrieval system
