Ictalurus furcatus (blue catfish): 128604204
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Entry
128604204 CDS
T09387
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128604204
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
PDZ_Tricorn
DUF6288
RNA_pol_Rbc25
Motif
Other DBs
NCBI-GeneID:
128604204
NCBI-ProteinID:
XP_053475090
LinkDB
All DBs
Position
29:10482776..10522790
Genome browser
AA seq
2002 aa
AA seq
DB search
MIETIDTQRCLQAVERLQARLKEKGGDVPSDEKLNLLKSVLQSPLFHQILALQKSVQHLK
EQPSCVNGGYADSGQINGQTSSEEHEHIIRTMAQGRYVTQVDLVKPVSGGLGFSVVGLRN
ESQGELGIFVQEIQTGSVAYCDGNLKEGDQILAINGQLLEQNISHQQAIVLLQRASEHVQ
ITVARGAIPQLSSPVVSRTPSAASTLSAHSSGTHWTHMETIELVNDGTGLGFGIVGGKTT
GVIVKTILPGGIADKDGRLRSGDHILRIGDTDLYGLGSEQVAQVLRQCGNRVKLLITRAT
VDEASPAPVPLPTVTEQQDHEEEEEEEEEEQDAFDVSLTKNTQGLGITIAGYVGDKNSEA
SGIFVKSITAGSTVEQDGRIHVGDQIIAVDGVNIQSYTNQQAVELLRHTGQTVHLKLVRH
GFRPEDTLLPITPVTTEATPRQECVAMDSMHDLMETSRHVAATVAVSPSTPERKKGFKLN
VDEEEELRRKWLNALGPSNEVIVVQVEKFSESSGLGISLEASAGHHYICSVLPEGPVGRS
GKLYSGDELLEVNGITLRGETHKEVVSILKELPVCVRMACCRPAPSPSTDSQSGQPRLEE
VATEKDLDDVEDFLTPGASETSLRGLMQEETVGTSLAMWESEIQDIELEKGERGLGFSIL
DYQDPMDPAKTVIVIRSLVPEGVAELDGRLLPGDRLMYVNSMNLESASLEEAVQALKGAS
LGTVHIGVAKPLPTPSSIFSALSMMERDEGEEEEEEEEEEVLFRAEPVLIDTSDVDLSDE
KFRRHYDAEEDDTFQASMIALHGSTCSADLTYQMAVQTSTPQRNTHLDSFTEYPFTTAPE
IGPPFSSEENGASVRLEAATVRLGSSHSDLITERDFERMDSTDLVMSNANPASTCKEETL
ASTLYKETGPMVAERRVRAAQEEEDDFPMDKTQEEETDQHEMTPGSNFERTITVVKGNSS
LGMTVSAVKDGAGMLIRSIIHSGAISRDGRLGVGDLILAINGEATGTLTNAQARAMLRRH
SLIGSETGSSLAPEEELCPFYIITYVPAEYLEEYKALKQAKDDCFAVDASSTPRSLAELP
EREDGEGEESELQTANFSNWNQARTVELYKEVGKSLGISIVGGRGMGSRLNNGEVMRGIF
IKHILEDSPAGRNGTLKTGDRIVQVDGVDLRDASHEQAVDAIRKAGNPVVFLVQSIINRP
RTSAADSMEGRASRVSNPNNKDVESHSRLFLRLSPTNPFTPTPFKLNREPGKISPTTMPF
LSVPRIGETDTDTLTQIPDHLTLPRDTVEEEEDEFGYTWKKVVERYGSLPGVLHMIELEK
GRSGLGLSLAGNRDRSRMSVFVVGIDPNGAAGRDGRIIVGDELLEINGQILYGRSHQNAS
SIIKSAPSKVKIIFIRNTDSLTQMAVIPMKEFGHVLDTQPESQTCSSLISSLSDMDMSKC
VQSLFLPVEEEGVVFSEEDKNGTIIQDVKEDGAATKIQVTSILSKANTSGKLTLHTDSHT
PISTLSNQTWRLSDPAVVSSTPLSLTPPEMESVKSCFGDGVSDSSRSSTPATLASDPVTC
PIIPGCETTIDISKGRTGLGLSIVGGCDTLLGAIIIHEVYEEGAAAKDGRLWAGDQILEV
NGIDLRTASHDEAINVLRQTPQRVRLTVFRDEAQYKEEELWDVLSVELQKKPGQGLGLSI
VGRRNDTGVFVSDIVKGGIVESDGRLLQGDQILSVNGEDVRTATQESVAALLKCCVGPIK
LEVGRFKAGPFHSERRLSQGSQLSEGGSYKASQLSFAGSGRSQEDFEDSHRSLESLDQDI
RTVELSKGPSESLGISIAGGVGSPLGDVPIFIAMMNPAGLAAQTQKLRVGDRIISICDTS
TEGMAHSQAVSLLKNTTGTICLQVVGGDTTVTGPALDQTSGLSSSSIFHDDLGPPQCKTI
SLERGPDGLGFSIVGGFGSPHGDLPIYVKTVFGKGAAAEDGRLKRGDQIVAVNGQSLEGV
THEEAVGILKKTKGTITLTILS
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacaattgacacgcagcgctgccttcaggcagtggaacgactgcaggctcgt
ctgaaggagaaaggaggcgacgtgccctctgacgagaaactgaacctgctcaaatccgtc
ctgcaaagccctctgttccaccagatcctcgccctccagaaatcagtacagcatcttaag
gaacagccttcatgtgtaaacggaggatatgctgactcgggtcagattaatggacaaacc
tcatcagaggagcacgagcacatcattcgcaccatggctcagggtcggtacgtaactcaa
gttgacttggtgaagccggtatcaggaggtctgggctttagcgtggtaggactgcgaaat
gaaagccaaggagaacttgggattttcgtacaggaaatccagacagggagtgtcgcatac
tgtgatgggaacctgaaggaaggagatcagatcctggcgataaatggacagctactggag
cagaacatcagccatcagcaggcaatcgtgctgctgcaaagagcatctgagcatgtacag
attacggttgccagaggggcaattcctcagctttccagcccagtggtgtccagaacacct
agtgctgctagtacactgtctgcacattcaagtgggactcactggacacatatggagact
atagagctagtcaatgatggcactggtctgggtttcggtatcgtcgggggtaaaactacc
ggcgtcattgtcaagaccattctacctggtggtatcgctgataaggacggtcgcttgcgc
agtggcgatcacatcctgcgtatcggggacactgacctgtacggtttgggcagtgagcag
gttgctcaggtgctgcggcagtgcggcaacagagtcaaactgctcatcactagagcaacc
gtggatgaagcctcccctgcgcctgtacccctgccaacagttactgagcaacaggaccat
gaagaagaagaagaagaagaagaagaagagcaggatgcattcgatgtcagcctgacgaag
aacactcagggtctcggcatcaccatcgcaggatatgtaggagacaagaactctgaggcc
tctgggatattcgtgaagagcatcacagcaggaagtactgtggagcaggatggccgcatc
catgttggagatcagatcatagctgtggatggtgtgaacatacagagctacaccaatcag
caggcagtggagctcttacgccacaccggtcaaacggtccatctcaaactcgtccgccac
ggctttagaccagaagacactctactgccgatcacacctgtgaccactgaggctacaccg
agacaggagtgtgtcgccatggacagcatgcacgaccttatggaaacatccagacatgta
gctgctactgttgctgtttcaccttccacacctgaacgaaagaaaggattcaaactgaat
gtcgatgaggaagaggagctgaggaggaaatggctaaatgctcttggtcctagcaacgaa
gttattgtggtacaggtagagaaattcagcgagagcagtggactggggatcagtttggaa
gcgagtgctggtcaccactacatatgctcggttttacccgagggacctgtaggacgttcc
ggaaagctctacagcggagacgaactattggaggtgaacggtataactcttagaggcgag
acacataaggaagtggtgagcattctgaaggagctgcccgtgtgcgtgcgcatggcttgc
tgtaggcccgccccttcgccctcgactgacagtcaatctggccaaccacggctggaagaa
gtagcgacagaaaaggacctcgacgatgttgaggacttccttacgcctggcgcatcagaa
acaagcctaagaggtctcatgcaagaggagactgtgggaacgtcattggcaatgtgggag
tcagagatccaggacattgagctggagaaaggagaacgtgggctgggttttagcatccta
gactaccaggaccctatggacccagctaagactgtgatcgtgatcagatccctggtgcct
gaaggtgtggctgaactggatggacgtttgttgccaggagaccggctgatgtatgtcaac
agcatgaacctcgagagtgctagtctggaggaggcagttcaggcactgaagggggccagc
ttaggcaccgtccacatcggagtagccaaaccgctgcctactccttcctctatcttctcg
gctctgtcgatgatggagagagatgagggggaggaggaggaggaggaggaggaggaagaa
gtcttattccgtgctgagccagtactgatcgacactagcgacgtggacttgtcagacgag
aagttccgtcgtcattacgacgccgaggaagacgacacgtttcaggcgtccatgatcgcc
cttcacggaagcacctgcagtgcagatctcacctatcagatggccgtgcaaacctccacc
cctcagagaaacactcacctggattcgttcacggagtatccttttacgacggcgcctgaa
atcggaccgccgttttcttccgaggagaacggagcatccgtacggcttgaagcagcgact
gtaagacttggctcctcccactctgatctgattacggagcgtgatttcgagagaatggac
tccacggacctagtgatgtcaaacgcaaacccagcttccacttgtaaagaagagacactt
gcatcaacattatacaaagaaacaggaccgatggtggcagagagacgtgttcgtgcagct
caagaagaggaagatgatttcccaatggataaaactcaagaggaggaaaccgatcaacat
gaaatgactccagggagcaattttgagaggaccatcactgtcgtcaagggcaactcaagt
ttaggtatgacggtgagcgcagtgaaggatggtgcgggtatgctgatccgcagtatcatt
cacagtggggccataagcagagacggacgtttaggtgttggagatctcattctcgccatc
aacggcgaagcaaccgggaccctgaccaacgcacaggcacgcgccatgctgcgcagacac
tcgctcattggatcggaaacgggatcttcacttgctccggaagaggagctctgccccttt
tatatcattacctatgtaccagcggagtatttagaggaatacaaggctcttaagcaggcc
aaggatgattgctttgctgtggatgcatcaagcacaccaaggtctttagcagaacttcca
gagagggaggatggtgaaggggaggagagcgaactacagacagcaaacttcagcaactgg
aaccaagcaaggacagtggagctctacaaggaggtgggaaaatctctgggtatcagcatt
gttggtgggcggggcatgggcagtcgcctgaacaacggggaagtgatgcgaggcatcttc
atcaagcacatcctcgaagacagccccgcaggacgcaacggaactctgaaaaccggagac
agaatcgtacaggtggacggtgtagatctgcgagatgccagtcacgagcaagctgtagac
gccattcgtaaagctggcaaccctgttgtgttcctggtgcagagcattatcaacagaccc
aggacatcagcagcagactccatggagggcagagcttcacgagtctcgaaccccaacaac
aaggatgttgagagtcacagtaggcttttcctccgtctctccccaactaaccctttcacc
cctactccatttaagttgaatcgagagccggggaaaatttccccgacgacgatgccattc
ctctcggtgccacgcataggtgagacagacacggacacgctgacccagatccccgatcat
ctcacccttcctcgtgacacggtggaggaagaggaagatgagtttggctacacttggaaa
aaggtggtcgagcgttatgggagtctgcccggtgtgttgcacatgattgagctggagaag
ggcagaagtggtttaggcctgagtctggcagggaacagggatcgctcaagaatgagtgtc
ttcgtagtaggcatcgaccccaatggagcagctgggagagatggtcgcatcattgtagga
gatgagctgctggagatcaacggtcagattctgtatggtcgctcccatcagaatgcctca
tccatcatcaagagcgccccttccaaagttaaaatcatcttcattagaaacacagattct
ctcactcagatggctgtcatcccgatgaaggaattcggacatgtcctggacacacaacca
gagtcccaaacttgttcctctctcatctcctcactgtctgatatggacatgtctaaatgt
gtacagagcttatttttaccagtggaagaggaaggagtggtatttagtgaggaggacaag
aatggcacgatcatccaggatgttaaagaagatggagcagccacaaagatacaggtgaca
tcaatactgagcaaagcgaatacctcgggcaagctcacgctccacacagatagccacacc
ccaatatcaaccttatccaatcagacatggagactgtcagacccagcggtggtctccagc
acgcctctgtccttgacacccccagaaatggaatcagtcaagagttgttttggcgatggt
gtttcagattccagcagatcgtcaacccctgcgaccttggcctcggaccctgtgacctgc
cccataatccctggttgtgagactaccattgatatctctaaaggaagaacagggctcggc
ctcagcatcgtgggtggctgtgacacactgctgggcgctataataattcacgaggtgtac
gaggaaggtgctgctgctaaagatggaagactctgggcaggagatcagattctagaggtg
aacggtattgacctgcgcacagcatctcatgatgaagcaataaacgtgttgaggcagact
ccacagcgagtgcgtctgaccgtcttccgcgacgaagcacagtacaaggaggaggagctg
tgggacgtgctgtcggtggagctgcagaagaaaccaggccaaggcctcggactcagtatc
gtcggaagaaggaatgatacaggtgtgttcgtgtccgacattgtgaagggaggcatcgtg
gagagcgatggacggctcttgcagggagatcagattttgtctgttaacggcgaggacgtt
cggacagcaacacaggagtccgttgccgctctgctaaagtgttgcgttggcccaatcaaa
ttggaggtgggtcgcttcaaggcagggccgttccattctgagagacgcctgtctcagggc
agtcagttaagcgaaggtggaagctataaagccagccagctgtcttttgctggttctggc
agatcacaagaagactttgaggacagccacagaagtctggaatcactggaccaagacatc
cgaactgtggagctgtccaagggtccatctgagtccttggggataagtatagcaggtgga
gtgggtagtcctctgggcgatgtgcccatcttcattgccatgatgaacccagctggtttg
gctgcacagacacagaaactccgagttggcgataggatcatatcaatctgtgacacgtct
acagaaggcatggcccacagccaagctgtatcactgctgaaaaacaccacaggaaccata
tgcctgcaggttgtcggaggtgacactacagtaacaggtcctgctctggatcaaacatct
ggactctccagcagcagcattttccacgatgacctgggtcctcctcagtgtaagactatt
agtctggagagagggccagacggcttgggcttcagtatagtgggaggattcggcagtccc
catggcgaccttcccatctatgtaaaaacagtgtttgggaagggtgcagccgcagaggat
gggcgtctaaagcgcggggatcagatagtcgcagtcaacggtcagagtttagagggagtc
acacatgaggaggctgtgggtattttaaaaaagaccaaagggaccatcacgctcaccata
ctctcatag
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