Ictalurus furcatus (blue catfish): 128604219
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Entry
128604219 CDS
T09387
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128604219 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
128604219 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128604219 (thoc6)
03041 Spliceosome [BR:
ifu03041
]
128604219 (thoc6)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128604219 (thoc6)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128604219 (thoc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_IP5PC_F
Beta-prop_SCAP
Beta-prop_RIG_2nd
DSE1_N
TRM82_WD
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
WDR54
Beta-prop_CAF1B_HIR1
CFAP251_N
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_like
Beta-prop_WDR75_1st
Beta-prop_LRRK2
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
128604219
NCBI-ProteinID:
XP_053475126
LinkDB
All DBs
Position
2:complement(39196889..39217757)
Genome browser
AA seq
323 aa
AA seq
DB search
MGPIELLHMSVFSQSFSPCSRFLAAGNNYGEIAVFSLSAALSPDATDASQKPVLTFTAHE
GPVFSLISTDTHLLSSGNGEISAWSWAELCKKNTKAVWTKRPDYKTGLEIPEINAMIINS
RENSLVVGGGDNNIHIMDLETGTFKSVLQGHTDYIHCLSLRERDGEILSGAEDGAVRMWD
GRTGQSVHCVEVYKYEECARPQYGKWISCVTTDSDWMLCGGGPALSLWHLRSMSPTSIFS
LSGCQREAVFHQDLIFAVGEGPHVSHCLLGGSVKAQIPCTPPSLNTLALNLGTTEHRVMT
VAGSSNQIDVFTNFSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgattgagctcctgcacatgtctgtgttctcgcagagtttctctccgtgttct
cgctttttagcagcggggaataactacggagagatcgctgtgttcagtctttcagctgct
ctgagtccagacgccacagacgccagtcagaaacccgtcctcaccttcaccgcccatgaa
ggtcccgtgttctcactgatctccacggacacacacctcctcagctccgggaacggagag
atcagcgcgtggagctgggcggagctctgcaagaagaacactaaagctgtttggacgaag
agacccgattacaaaaccggtctggaaatccccgagatcaacgccatgatcatcaacagc
agagagaacagcttggtggtcggtgggggagacaacaacatccacatcatggacctggaa
actggaaccttcaagtcagttctgcagggtcacacagattatattcactgtttatctctg
agagagagggatggagagatcctgtcaggagcggaggatggagccgtgagaatgtgggac
gggaggacgggccaaagcgtgcactgtgtggaggtttataaatatgaggaatgcgctcgc
ccccagtacgggaagtggatcagctgcgtgacgacggattctgattggatgctgtgtggt
ggaggccccgccctctctctgtggcatctccgctccatgtctcccacctccatcttctcg
ctgagtggatgtcagagggaagccgtgtttcatcaggacctgatctttgcagtaggtgag
ggtccacacgtgtctcactgtttgctggggggaagcgtgaaagctcagatcccctgcact
cctccgtcactgaacacactcgccctgaaccttggtaccactgaacacagggtgatgacc
gtcgcaggcagcagcaaccagatcgacgttttcaccaacttctcctacagagccttctcg
ctgtccttctga
DBGET
integrated database retrieval system
