Ictalurus furcatus (blue catfish): 128604243
Help
Entry
128604243 CDS
T09387
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128604243 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128604243 (fip1l1b)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128604243 (fip1l1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
128604243
NCBI-ProteinID:
XP_053475194
LinkDB
All DBs
Position
29:885693..891641
Genome browser
AA seq
563 aa
AA seq
DB search
MSADESEKTTTTAVAAAVAVAVAEAPAGDEEEEWLYGDEGESKETEEEEAKLTAAVSAPS
APAAPEENSTGNGVASQEEAHGDNQDSESDSDDDDDDVRVTIGDIKTGAPQYPTYGAAPV
NLNIKTGGSRPYGAVGAKVKGVDLDAPGSINGVPVLEADMESFEEKPWRKPGADLSDYFN
YGFNEDSWKAYCEKQKRLRMGLDSISISSATSKISVQQGRTGNDKEAALPVHVAKTDFTS
PSNLYKTGLNPARISPPQWAGPASQDTPYYTKSTGTIDVIGGQTATISRVEGRRRHNLEG
NNIQVVSEHTTSEAEATPAKLPTFFPPGPLPPNIPPPPFLPPPPVSQAPPLIPPPRLPIT
IPPPGFPPPPSGPPPSLMPTLDNSGHPGGYDCRPVTPYTFPPGSYPPPMQGPVNNWAGMM
DSSKQWDYYPRREKEREKERERERTRDRGHDREREREREHSPSSMAYNSDEERYRYRDYG
DRGYERHRERSSREKEERHRERRHREKEEGRHKSSRSSSRRRHDSEEGDGHRRHKHKKSK
RSKEGKEPSEERAADQENQEAME
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggatgaatcggagaaaacaacaacaacagcggtggcggcggcagtagcggta
gcggtagcggaggctcctgcgggggatgaggaggaggaatggctctacggcgatgaagga
gaaagcaaggagacggaggaggaagaggccaaactcacagctgctgtcagtgccccctct
gctcctgcagcccccgaggagaacagcactggaaatggagtggccagtcaggaggaggcg
catggtgacaaccaggacagcgagagcgacagtgatgacgacgacgatgatgtccgcgtg
accatcggcgatattaagacgggcgcgcctcagtacccgacgtacggagcagcgccggtc
aatctgaacataaagacaggaggcagcaggccatacggagcagtgggagcgaaggtgaaa
ggtgtggatctcgatgccccaggcagcattaacggtgtccccgtgctggaggcggacatg
gagtcgtttgaggaaaagccctggagaaaacctggtgccgacttgtcggactactttaat
tatggctttaacgaggattcttggaaggcatactgtgagaaacagaagcggctgcgtatg
ggcctcgactccatcagcatcagctctgctaccagcaaaatttctgttcagcagggcagg
acagggaacgataaagaggctgcgcttcctgttcatgttgctaaaacagactttacctcc
ccatccaacctgtacaagacaggcctgaacccagccaggatatcccctccgcagtgggcg
gggcctgcatcccaagacacgccctattatacgaagtctactgggaccatcgatgtgatt
ggtggacaaacagccaccatcagcagggtggagggacgccgccgacacaacctggaggga
aataacatccaggtggtctccgaacacaccacctctgaagcagaggccacacccgccaaa
ctcccaaccttctttcccccagggcccctccctcccaacataccaccacctcctttcctg
cctccgcctcctgtcagccaggctccgccccttatccctccaccgagactcccgatcacc
atccctcctcctggtttcccgcctcctcccagtggcccacccccttcgctcatgccaacg
ttagacaacagtgggcatcctggaggatacgactgccgtcctgtcactccgtatactttc
ccaccaggtagttacccgccgcccatgcaggggcccgtgaacaactgggccgggatgatg
gacagctcaaagcagtgggattattaccctcgccgagagaaagaaagagagaaggaacga
gagagggagaggacaagggaccgaggacacgaccgggagagagagagagagcgagagcat
agtccctcgtccatggcctacaacagtgatgaggagcgctaccgttaccgtgactacgga
gaccgtgggtacgagaggcatcgggagcggtcgagccgagagaaagaggagagacaccgt
gagaggagacacagagagaaagaggagggaaggcacaagtcctcacgcagcagtagcaga
aggaggcacgacagcgaggaaggtgatggccatcgcagacacaaacataagaagtctaag
aggagtaaagaaggcaaagagccgagcgaggagcgagcagccgaccaggagaaccaggag
gccatggagtaa
DBGET
integrated database retrieval system
