Ictalurus furcatus (blue catfish): 128604341
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Entry
128604341 CDS
T09387
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128604341
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Other domain-containing proteins
FERM domain-containing proteins
128604341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
128604341
NCBI-ProteinID:
XP_053475388
LinkDB
All DBs
Position
29:complement(2156380..2180485)
Genome browser
AA seq
1690 aa
AA seq
DB search
MEDRDRSRSPSRRTSKVEQVVGRWLRRSRESTSRERVLDDDGRGPDASPQEQRSCPVRVT
VQIPLDPDLKSHGFTVSTHTPAQVEEVVAGGPADGKLFPGDQLVKINNVALDDLSTEQAA
DVIKECQDTITVTVLRIAVGPKSSFITPEKRAKLKSNPVKVRFAEEVVVNGHSQGNSLLF
LPNVLKVYLENGQTKAFKFEPKTTVKDIVMTLKEKLSISRIEHFSLVLEQQYSIAKLFLL
HEDEPIQEVVQKREPHDYRCLFRVCFMPKYPQELLEEDPVAFEYLYLQSVSDVLQERFAV
EMKCNTAIRLAALHIQERLASTGQSPKTPLKTVMKDWGIESFVSSTLLKNMREKDLRKAI
SLHMKKILLQEHKHKAMTVNQARLHYLSEMSELKSYGGKSFSATLMLQDRESTVSLLVGA
QYGVSQVINHKLSIMTTLTDFSSITRVELVTESERVSLVKIYMQDIKPITLLLESVPAKD
LSCLVAGYCKVFIDPQICVFPWTAESKGHRISAEEGYVSRCCSDSEDSEVDALLVHACSS
PTQTDANITSVAGQEEEKTNAEEEEDAEDKSEKESVENGAGETKKVRLEDQVDSVHADEG
EAVGPDAENHTVETEEEEPPCVIIVEDPPSEASDSFQTDSRFVTSMSSDSMDALEEDDFL
TYFSTNSVSQLNVRDHYLHVDTRTPCPSQPDCQDGDFNEEPCSVDFPDDEFLCLAALSNI
AECLPSPTEASEDEYSEQGDDDEQEAPEDVFESAEPARGEAMFTFNQGDVRCYYNICSNV
TPDSGHVHARTASAHHTREENKAEAERESEPVPILLPPPGFGDSSSDDEFFDAQEKFIPE
EPLSAPMPKGRSRDSSVTKRTLSLSHIGTGAGERKKREGESKNRERKDQEKLKTETENEV
PRFRKRSRKRRSFMETEYTSLVSFPEKDRTKTYNRIPNHWLGRRHLSESHLGGPSNRSSC
PTVSSLTNAEGEPAEMESKPITQSNPSHHLLHGNKISKASQRKQQVILMEPDSMEFKSVT
EIMSTASPSIVAVRTSTEPKVTSNVTSGADGLEEESAVERLLDGHLFFGTPSSDDALPVK
IIYQESLIEGPFQEPLLRKKSCSLPRLDQTPASSSLSLKVPTISFTQNPGMDRLDVDSLE
MGTQKCSVGPTERTRRSQSMSAVSESSGLFCLTRHLCPQTEPVVRTVEPHSGDTDSSGDP
FTQEPSSTVSPGPQCSSRILGRLSTSAMRGKTQDLPLYMSRSQEALPSDSSLVDDAKQAR
RFSENMTTTEVKSEELTEVVEEIGEVDRNNSYVEREQKSVPEELSWTLKSPSGLKSVDPV
KIGPSSLVVTTQKPNGPWGVVTSQEISRLQAGSSRRVGAHSQPLTHYESKPTNTQPQALP
GPNLHAKPDLTCSSVLASVCETVIESAETPMEVCGCQSAYTKCFSSVLDNGSFDDELTVY
EFSCRTQQSMRDRIVAVTSIPSSLSGSSSSFSPSSPLPAFSRVVLPPSSSAELGPLLSPL
DCFLSDPHGDAITALLAQHYPLPPTGFLALQRDVDTLLAVLDGATKEQDCIQEHPRDTCA
DHFSENKRRLHVEARGFLAGCQQVVKAGQTPAETLQALADSFHSLVQLTAVCLSFSSCQR
CQERHSQTLSGLADVAQTYQEFARAAERLGMAAERRTCHELSIKLLARQCTALTTSVFCL
TQLFRTLTAL
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgggaccgcagccgctctccgtcacgcaggaccagcaaagtagagcaggta
gtagggcgctggcttcgtcgttccagagagtccacgagcagagagcgcgtgttggacgac
gacgggcgaggacctgatgccagtcctcaggaacagagaagctgtccagtccgagtgacc
gttcagatcccactggaccccgacctcaagtcccacggcttcaccgtgtccacacacact
ccagcacaggtggaggaggtcgtcgcagggggtcctgcagacggcaaactcttccccggc
gaccagcttgtgaaaatcaacaacgtcgctctcgatgatctgtctacagagcaagctgcc
gacgttatcaaggagtgccaggacaccataacagtgacagtcctgagaatagcagtgggg
ccgaagtcgtccttcataaccccagagaagagggctaagctaaaatccaacccggttaag
gtgcgcttcgccgaggaagtggtcgttaacggccactcgcagggtaactctctgctcttc
ctgcccaacgtcctgaaggtctatttagagaacggacaaaccaaagccttcaaattcgag
cccaagaccactgttaaggacattgtgatgaccctgaaagagaagctatcgatatcccgc
atcgagcacttctctctggtgctcgagcaacagtacagcatcgccaaactctttctgctg
cacgaggacgagccgattcaagaagtggtccagaagagagagcctcatgactacaggtgt
ctgtttcgtgtctgcttcatgcccaaatatccacaagagctgctggaggaggaccccgta
gccttcgagtatctctacttacagagcgtgagcgatgtccttcaggagaggtttgctgtg
gagatgaagtgtaacacagcgatcagactggcagctctacacatacaggagagactcgcc
agcaccggccagtctcctaaaacaccgctaaagaccgtcatgaaggactggggtatcgaa
agctttgtctccagcaccctgctgaagaacatgagagagaaggacttgagaaaagccatc
agtttacacatgaagaagatccttttacaggaacacaagcataaggcgatgacagtaaac
caggccagactacactacctgagcgagatgtctgaactcaagtcttacgggggaaaatcc
tttagcgccaccctgatgctgcaagacagggagtctacggtgagcctgttggtgggggca
cagtacggggtgagtcaggtgatcaatcacaagctgagcatcatgaccacactgacggac
ttcagcagcatcaccagggtggagctcgtaacggagtcggaacgcgtcagcctggtcaag
atctacatgcaggatataaagcccataaccttgctgttggagtccgtgcctgctaaggat
ttgtcgtgcctggtagctggttactgcaaagtattcatagatcctcaaatctgcgtgttc
ccctggacagccgagtcaaagggccaccgtatatctgcagaagaaggttatgtatcaaga
tgctgcagtgactccgaagactccgaagtggatgctctgcttgttcatgcttgttcaagt
cctacccagactgacgcaaacatcacttcggtcgcaggacaagaggaagaaaagaccaac
gcagaagaagaggaggatgcggaagacaagagtgaaaaagaaagcgtggagaacggtgct
ggagaaacaaagaaagtaagactagaggatcaggttgattccgtgcatgccgatgaagga
gaagcagtaggacccgatgcggaaaaccacacggtggaaaccgaggaggaggagccacca
tgcgtcatcattgtggaggacccaccatcagaagcatcggattcatttcagacagactcg
cgcttcgtaaccagcatgtccagcgactccatggacgctttagaggaggacgactttttg
acctacttctccactaacagcgtcagccagctgaacgttagagaccattacctccatgtc
gatactcgtacaccgtgtccgagtcagccggattgccaagacggcgatttcaacgaagaa
ccgtgttccgtcgatttccccgacgacgaattcttatgtcttgctgccctgtctaacatc
gcagaatgtctacccagtcccaccgaggccagtgaggacgaatattcggaacagggagac
gacgatgaacaagaagcaccagaggacgtcttcgaaagcgccgagcctgctcgtggagaa
gctatgttcacgttcaaccagggcgatgtacgatgttactacaacatctgctcgaatgta
acgcccgatagcggtcacgtccatgcaagaacagcttctgctcaccacactcgtgaagaa
aacaaagcagaggcggagagggagtccgagccggtgcccatccttctgcctcccccaggt
tttggggacagtagctcagacgatgagttctttgacgcccaggagaaattcattcctgag
gaacctttgtcagcaccaatgcctaaaggacgttctagagattcgagcgtcacgaagcgt
actctgagcctaagccacatcggcaccggtgccggcgaacgaaagaagcgagaaggagag
agtaaaaacagagagagaaaagatcaagaaaaactaaagacggagacggaaaacgaggtt
ccgaggttccgcaagagaagcagaaagcgccgttccttcatggaaaccgagtacacgtct
ttagtatcgtttcctgaaaaagaccgaacgaaaacgtacaaccgaatcccaaatcattgg
ttgggacgtaggcatctcagtgaaagccacctcggtggaccgtcaaatcgaagctcctgc
cccacggtctcatctctaacaaatgctgagggcgagccagcagaaatggaatcgaaaccc
atcacccagtccaacccgagtcaccatctcctgcacggtaacaaaatcagcaaggcaagt
cagcggaaacagcaggttatactgatggaaccggattccatggagtttaagtctgtcacc
gaaatcatgtctactgcctcgccttctattgtcgcagtacgcacgtctacagagcctaaa
gtaacatccaacgtcacgagcggagctgatggacttgaagaagaaagtgcagttgaaagg
ttgcttgacggtcacttgttttttggcactcctagcagtgacgatgctttacctgtgaaa
ataatctaccaagaatccctgatagaaggtccatttcaggaacccttgctgaggaaaaag
agctgttcacttccacgattagaccaaacacctgcatctagctcgctttctttgaaagtc
ccaaccatatccttcacccagaaccctggcatggacaggcttgatgtagacagtctggaa
atgggcactcagaaatgttcagtagggccaacagagagaacaagaagaagtcagagcatg
tctgcagtatctgagagcagcggtctcttttgtttaacgaggcacctctgtcctcagacg
gaacctgtagtccgcacagtagaaccacattctggtgacacggacagttctggcgacccg
ttcacccaagaaccatcctccactgtatcccctgggccgcagtgttcttcacgcatcctt
ggtcgcctctctacttcagcaatgcggggaaagacccaggacttgcccctgtacatgtct
cgttcccaggaagcactacccagtgacagtagtcttgtagatgacgccaaacaagcaagg
agattttctgaaaatatgaccacaactgaggtaaagtctgaagagctcacggaggtggtt
gaagagattggggaagtagatcgcaataattcttacgtggaaagagaacagaaaagtgta
cccgaagaactctcttggactctgaagtcaccttcgggcctgaaatcggttgaccctgtc
aaaatcggcccttcgtctcttgtggttacgacgcagaaacctaatggaccgtggggtgtg
gtgacgtcacaagagatcagcagattacaagcaggaagcagccgtcgtgtgggtgcacac
tcacaacctctcacacattacgaatccaagcccaccaacacccagccacaggctctgcct
ggcccaaatctacacgcaaagcccgaccttacttgcagctcagtgcttgcctcagtgtgt
gagacagtaatcgagagtgctgaaacaccgatggaggtttgcggctgccaatcagcatac
accaaatgcttcagcagcgtcttggacaatgggagttttgatgacgaactgactgtctat
gagttctcctgcaggacacagcaaagcatgcgtgaccgaatagtggcggtgacgtctatc
ccttcatccctttctggttcctcttcctctttttcaccatcctcaccccttccagctttc
tctcgtgtggtcctgccgccgtcctcgtccgcagaactcggccctcttctgtcgcccctg
gactgcttcctctctgaccctcatggagacgctatcaccgccttactggcccagcattac
cccttaccaccaacaggcttcctggctctgcagagagatgttgacacactattagctgtc
ctggatggtgccacgaaggaacaagattgcatccaagagcatcccagagacacgtgcgca
gaccacttttctgaaaacaagcgcaggctgcatgtggaggcgcgagggtttctggctggc
tgtcagcaggtagtgaaggccgggcagaccccagcagagacgctgcaagctctagcggac
agttttcactcactggtgcagctgacggccgtgtgcctgagtttctctagctgccagagg
tgccaggagcgccactctcagaccttgtcgggacttgcagacgttgcgcagacctatcag
gagtttgcacgggcggcagagcgcttgggcatggctgcggaaaggaggacatgccatgag
ctcagtattaaactcctggcccgccagtgtaccgcgctaacaacctcagtcttctgccta
acacagctattccgtaccctcacggccctttga
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integrated database retrieval system
