Ictalurus furcatus (blue catfish): 128605116
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Entry
128605116 CDS
T09387
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128605116 (trip11)
Membrane trafficking [BR:
ifu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128605116 (trip11)
Retrieval pathways
128605116 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
Motif
Other DBs
NCBI-GeneID:
128605116
NCBI-ProteinID:
XP_053476233
LinkDB
All DBs
Position
3:complement(985042..1002981)
Genome browser
AA seq
1988 aa
AA seq
DB search
MASWLGGLGSGLGQSLGQVGGSLSSFTGQISSFTKDILLEGAEEVGDAATELHVSNSKLL
ELESALSAQKSEYERLRRINGELEEKLEAAEIQVKQQSAEYRTILQQKEVDISHLKARQS
SLQEEVQKLRLSAQDFSSSSSNPAVLPVTTVATTAGSSSSFLSRPSAGHHGFHGDEVDLS
DVLWSQQEINRLSHEVQRLEADVAHWRRVAQASKVSGAEKGGDHGEILKLQRTIKELREE
MGHEVDEHQHELTALQDAHRQKMADMAKRHRDELAEYEERIEELEEQLQSGTAATLHTPA
AASPDSSRLEELQAAIRSLREAAELQNTKCSELAASLEEARRQGAELQREKDEAKAENSE
LLQNYTRLQSSVSELQTRVQEQESKAMVKAQHDGEMHALRKALADAEKEVSRLKSLTEIN
PGAEVEHADILEFNTVLDALRAEKEELEKEKSALVKNLRLAENRGTWSEAEGSEDLQLEL
TDLKNQLEHREEALKQAHASMDTLTAELEELDRQNQEATQHLITMKDQLAAQKSQAEAEV
SRLKSELTASLGQKEALGQELAAQKEKLSQSAFTLNDLHMGKQQLEATIKELRDKLKKSQ
ELGKETCLEASELKKLLQERETQLDALREDLSQAGERGDEVKGQMKVLEEKENEIQDVRR
ELAELKALYEKVSSEDFELKMENRKLKEDRVQALEKLEDLDRQLQDGQASLSRAVFEKDT
RIEALKLEKNQLEVELSQAENRLLDQAKQYQQTVEELTRARSLDASALQMEHERAVKLNQ
EKDLTIAKLKREMEQMVADHKDTSEMLDITVAGQKQLTELLQEKDAFAASLKARADEAQQ
DLEARISQARQESDALRKVVEEKDKQLGAMKEKNSHLKEEIDRLKDQQSRPQPMSEPRTL
DIITELETEVAQLKAARDRFEEEASTIRATSEQQRESLIQSQHALQVHQNELEQARSRHE
QSTLNYEKLIGAKDEEITRLQVEMETLSVPSRPPTVEILQEDKTRSLGGENGNEKHDLSK
VEIEKLVKGIKEKETEILQLNEKNLSLTKQLDQLAISRDELGKLSQIVLQKDLEIQALHA
RVSGGYTQDVLLLQQQMQAYAVEREQVLAVLNEKARENSHLRSEYHRIMEIVAAKESALL
KLQQENQRLSTMSDPSGSQEMFRETIQNLSRIIREKDIEIDALTQKCQTLVTVLQASGGD
SGSSGSGGVSSNQFEELLHERDNLKQQVKKMDEWKQQVITTVKNMQHESAQLQEELLKLQ
GQVSADSDCSSKLSVDYTRLIQSYEQKEKRLGSLSQELAQVQQTISQLSSTKDVLLGKLD
SVSQVPDLSAQPVQTVGHQSAQDAQDAPPKLPVVQDENLRQELESLQRALAEKQDMLRTL
QENNHRLANSASLSGNEQRGHAEELRQARERIETLQRSLREKDLLIKTKGDQLNQVSETL
RNRENDNEVLKQAVTNLKERALILELDVKKLKEENEAVTAKSREKETEFRALQETNMQVS
LMLREREFQCSTITEKAAAMENLLKDKEQGKTGELNQLLNEVKSMQEKALAFQQERDQVM
LALKQKQMETSALQSELQHTREKEQRQKLELERLRNHLLEIEDSYTREALAAEARESELR
RRVAMLDEKLTSSSSAVESASQQASLQVESLQEQLNVLARQRDEAVLQLHAAQEQVNQYA
VSLSNLQMVLEQFQQEEKAMYSAELEKHKKEKEEWRRKADRLEDEASALQLNLDEATAAL
ESASRLTDQLDLKEEQIEELKKQVEVRQEMLDEAQHKLTDLLNSTEGKVDKVLMRNLFLG
YFHTPRNKRAEVLRLMGNVVGLERDDVDKMLEEEVRKGVTGWVSGWLGGSRAVQSVPTTP
QRPTHTQNLNGSFSEMFVKFLEVESTPAAPAPKLPVYDIKPLSAPPPGRNASSATAAGSS
GSGKRGADSNPFLAPRSAAVPLLTAGGGGAAGGHLLMKPISDALPTFTPVPVAADASAGA
VLKDLLRQ
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctggttggggggtttgggctcgggcctcggtcagtctctcggtcaggtcgga
ggaagtttatcctcttttactggacaaatctccagtttcaccaaagacatccttctggaa
ggagcggaagaagtcggagatgctgccaccgagctgcacgtgtccaactcgaagctgctg
gagctggaatcggcgctctccgcgcagaaatccgagtatgaacgcttgaggagaataaac
ggcgagttggaggagaagctggaggcggcggagatccaggtcaaacagcagtcggcggag
tacaggaccatcctgcagcagaaagaggtggacatcagccacctcaaagccagacaaagc
agcttacaggaagaagtccagaagctccgactctccgcccaggacttctcgtcttcgtct
tccaatcctgccgtgcttcccgttacgaccgtcgccaccaccgccggctcctcctcctcc
ttcctgtcccgcccctcggccggccatcacggtttccacggcgacgaggtggacctgagc
gacgtcctgtggtcgcagcaggaaatcaaccggctgtcccacgaggtgcagcgcctggag
gcggacgtcgctcattggaggagagtggcccaggcgtcaaaagtgtcgggagcagaaaaa
ggcggcgaccatggggagatcctgaagctgcagagaaccatcaaggagctgcgagaggaa
atgggccacgaggtcgacgagcaccagcacgagctgacggcgctgcaggacgctcatcgg
caaaaaatggcggacatggcgaagcggcacagagacgagctggcggagtacgaagagagg
atcgaggagctggaggagcagcttcagagtggaactgctgccactctccacactccagca
gcagcgtcgccggattcctccagactcgaagagctgcaggctgcgattcgctccctgcgt
gaggcggcggagcttcagaacacgaagtgcagcgagctcgcggcgagtctcgaggaggcc
cggcgccagggggcggagctccagcgagagaaggacgaggcgaaggcggagaactccgaa
cttctgcagaactacactcgactccagagctccgttagtgaacttcagactcgggttcag
gagcaggagagcaaagcgatggtgaaagcacagcacgacggcgagatgcacgctctcagg
aaagcgctcgcggacgctgaaaaagaggtgtccaggttgaaatccctcactgaaataaat
ccgggtgctgaggtcgaacacgcggacattctggagttcaacacggtcctcgacgcgctc
agagcggagaaggaggaactagagaaagagaagtcggcgttagtgaagaaccttcggcta
gcggagaaccggggcacgtggagtgaagctgaaggctccgaggacctgcagctcgaactt
acagacttaaagaatcagctggagcacagagaggaagctttaaagcaagcgcacgctagc
atggacactctcacagcagaactggaagaactcgaccggcagaaccaagaggccacgcag
catctcatcacaatgaaagatcaacttgctgcacagaagtctcaggctgaagctgaagtt
agccgtttaaaatcggagcttacagcgtcgctcggtcaaaaagaggcgcttggtcaggag
ttggcggctcagaaggagaagctcagccaaagtgcctttaccctcaacgacctacacatg
ggcaaacagcagctggaggccacgataaaagagctgagggacaaattaaagaagtctcag
gagcttggcaaagagacgtgcctggaggcctccgagctgaagaagctgctgcaggaaaga
gagactcagctggatgctctccgtgaggacctgagtcaagcaggggagcgaggggatgag
gtaaagggtcaaatgaaagtcctggaagagaaggagaacgaaatccaggatgtgagacga
gagctggcggaattgaaggccttgtatgagaaagtgtcatctgaggactttgagttaaag
atggagaacaggaagttgaaagaagaccgcgttcaggctcttgagaaactggaggatttg
gaccgacagctacaggatggccaggcctctctcagccgagcagtctttgagaaagacact
cgcatcgaagccttgaaactagagaagaaccagctagaagttgagctgagtcaagcagag
aaccggcttttggatcaggccaagcagtaccagcagaccgtcgaggagctgactagagcg
cgatccttggatgcctctgcattgcagatggaacacgaacgtgccgtaaagttaaaccag
gagaaggacctgacgatcgccaagctaaagcgcgagatggagcagatggtggccgaccac
aaagacaccagtgagatgttggacatcaccgtggctggacagaagcagctcaccgagctt
ttacaggagaaggatgcttttgcggcgtcattaaaagctcgggctgatgaagcgcagcag
gatttagaggccaggatctcgcaggcaagacaagaaagtgacgcacttaggaaagtagtc
gaggagaaggacaagcaactaggggccatgaaggagaagaacagtcacctgaaggaggaa
atcgaccgcctgaaggatcagcagagtagaccgcagccgatgtccgaaccaaggacgctg
gacataatcaccgagctggaaactgaagtcgcacagctcaaagctgctagagacagattt
gaggaagaagcaagtactatcagggcaacgtcagaacaacaacgggaatcgctcatacag
tcgcagcatgcgttacaggtgcaccagaacgaactggagcaggctcggtcgagacacgag
caaagcaccctcaactacgaaaaactgatcggtgccaaggatgaggaaatcacgaggctg
caggtggagatggaaacactcagcgtaccaagtcgacctccgactgtggaaatcctccag
gaggacaagactcgttctctcggtggcgagaatggcaatgagaagcatgacttgtccaag
gtggagattgaaaaactcgtaaagggcatcaaggagaaagagaccgagatcctccagcta
aacgaaaagaacctctctttgaccaagcagctcgatcaacttgcgatctctcgcgatgaa
cttggcaaactttctcaaatagtgcttcagaaggatctagaaatccaagcgcttcacgct
cgtgtttcaggaggctatacccaggatgttctgttgcttcagcagcagatgcaagcttat
gcggtcgagcgagagcaagtgctcgctgtactgaatgaaaaagcacgcgagaacagccac
ctgcgttcggaataccatcgcatcatggaaatagttgcggccaaggaatcggcgttactc
aagctccagcaagaaaaccagcgcctgtctactatgagtgacccttccggaagccaggag
atgttccgagagaccattcagaacttgtctcggatcatccgcgagaaggacattgaaatc
gatgctcttacgcagaaatgccaaacattggtcactgttctccaagcatctggtggagac
tctggaagcagtggttcaggtggcgtgagcagcaatcagttcgaggagctcttgcatgag
agagacaacctcaagcagcaggtcaagaagatggacgagtggaagcaacaggtgatcacg
actgtgaagaacatgcagcatgaatctgcccagctgcaggaagagcttcttaaactccaa
ggccaggtgtcagctgacagcgactgcagctccaaactctcggtcgattacacgagactc
atccaaagctacgagcagaaggagaaaaggctgggcagtttgagtcaggaacttgcccag
gtccagcagaccatcagccagcttagtagcactaaagacgtcctgcttggaaagcttgac
agcgtttctcaggtcccagacctttccgcacaacccgtccaaactgtaggacatcaaagt
gcccaggatgcccaggacgcaccaccaaaactgccagttgttcaagatgagaacttacga
caagaactggaatcgttacagagggcgttagccgagaagcaggatatgttgagaacgctt
caggagaacaaccatcgcttggcaaattctgcgtctttgtcaggaaacgagcaaaggggc
catgccgaggagctcaggcaagcacgggagaggatcgagaccctgcagcggtccctcaga
gagaaagacctgcttatcaagaccaaaggagaccaactgaaccaagtgagtgaaacgttg
cgcaaccgtgaaaacgataacgaggtcctgaagcaggccgttacaaacctgaaggagcgc
gcactgatcctcgaactggacgtcaagaagctgaaggaggagaacgaggccgtgacggcg
aaatcgcgggagaaagagacggagtttcgggctctgcaggagaccaacatgcaggtgtcg
ctgatgctgcgggagcgagagtttcagtgcagcaccatcaccgagaaggctgcggccatg
gagaatctgctcaaagataaagagcagggtaagaccggcgagctgaaccagctgctgaac
gaggtgaagtccatgcaggagaaagcgctggcgttccagcaagagagagaccaagtgatg
ctggctcttaaacagaagcagatggagacttctgccctacagagtgagctgcagcacact
cgcgaaaaagagcagaggcagaagctggagttggagcgcctccgcaatcacctgctggag
atcgaggactcgtacacgcgggaggcgctcgcggccgaggcccgggagagcgagctcagg
cgcagggtggcgatgctcgacgagaagctgacgtcgtcttccagcgccgtggagagcgcc
agtcagcaggccagtctgcaggtggagtctcttcaggagcagctgaacgtcctagccagg
cagagggacgaggctgtgcttcaactccatgctgctcaggaacaagtcaaccagtacgca
gtgtctctgtccaacctgcagatggtgctagagcagttccagcaagaggagaaagccatg
tactcggcagaactggagaaacacaagaaagagaaggaggagtggaggaggaaagcggac
aggctggaggatgaagcctccgccctgcagctgaatctggacgaggcgactgccgcgtta
gagtcggcttcccgcctcactgaccagctcgacctgaaggaggagcagatcgaggagctg
aagaaacaggtggaagtgagacaggagatgctggatgaagcccagcacaaactgaccgat
cttctcaacagcactgaaggcaaagtggacaaagttctaatgaggaatctgtttctcgga
tatttccacacgccgagaaacaaacgcgccgaagtgctgaggctcatgggtaacgtggtt
ggattggaacgggacgacgtggacaagatgttggaggaagaggtgaggaagggggtcacc
ggttgggtgtcagggtggttaggaggcagcagagcggtacagagtgtccccaccacaccc
caaagacccacccacacccaaaacctcaatgggtctttctcggagatgtttgtgaagttc
ctggaagtggagtccactccggctgctcccgctcccaaactgcccgtttacgacattaag
cctctgagtgcgccccctcctggccggaatgcttccagcgcaactgcggcaggctcgtcc
ggcagcgggaagcgcggcgcggactcgaacccgttcctggcacctcgctccgcagctgtt
ccgctgttaacggccggcggcgggggggccgcgggtggacacctgctcatgaagcccatc
tcggacgctctccctacgttcacgcccgtgccggtggcagccgacgccagtgcaggggcg
gtccttaaagatctgctcagacagtga
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integrated database retrieval system
