Ictalurus furcatus (blue catfish): 128605120
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Entry
128605120 CDS
T09387
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128605120 (rtf1)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
128605120 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
128605120
NCBI-ProteinID:
XP_053476237
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Position
3:complement(1012898..1024443)
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AA seq
680 aa
AA seq
DB search
MVNVKKRKGRVVIDSDSEDSASDDNLDQELLSLAKRKRVDSEEPEEPISKPAASTDSETS
DSDDEWTVGGTKAKKKVKPGKGAEKKNPTKKKVNKAASSGSSDGDSSAESSAPEEGEVSD
SESNSSSSSSDSDSSSEDEVFRDGYGDDLMGDEEDRARLEQMTEKEREQELFNRIEKREV
LKRRFEIKQKLKTEKKKVKEEKKKKKQEEEQEKKKLSQVTDTQVVMSHNKERRSKRDEKL
DKKSQAMEELKAEREKKKNRTAELLTKRQPLKASDVYSDDEEEEEEDDDKSSVKSDRSSR
LSSSDEEEEKEATPPKSQPVSLPEELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGN
SSSKPVYRVAEIVDVVETAKVYQLGSTRTNKGLQLRHGNDTRVFRLEFVSNQEFTESEFM
KWREAMHGGGMQIPTLDEITKKEQSIKEAVNYKFNDKDIEDIVKEKDRFRKAPPNYAMKK
TQLLKEKAMAEESGDGDKVKMLQDQLNELEERAEALDRQRTKNISAISYINQRNRSWNIV
ESEKALVAEGQNSKNQQMDPFTRRQCKPTMVSNARDPSVHAAILAHLNQKYGSGSGQDNA
QQINKQQGSANQRDKDVTKTTSDLSEDLFKVHDFDVKIDLQVPSAETKSLSVSSNSLPVK
DGAPRRSLNLEDYKKRRGLI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgtaaagaaacggaaaggtcgggtcgtcattgattccgactcggaagacagc
gcgagcgatgacaatttggatcaggagctgctgagtttggccaagaggaagcgtgtggac
tcggaagaacccgaggaacccatcagcaaacctgccgcgtctacagactccgagacgtcc
gacagcgacgatgagtggactgtcggaggcaccaaagccaagaaaaaggtgaagcctgga
aaaggggcagaaaagaagaaccccacgaagaagaaagtgaacaaggccgcttcgtcaggg
agctcggatggagacagctcagccgagagctccgcccctgaggagggcgaggtgtccgac
tcggagagcaacagctcctcctccagctcggattcggactcgtcctcggaggacgaagtg
ttccgggacggatacggagacgatctgatgggggacgaagaggaccgggcgcggctggag
cagatgactgagaaggagagagagcaggagcttttcaaccgtattgagaagagagaggtg
ctcaaacgcaggttcgaaatcaagcagaaactaaagacggaaaagaagaaggtcaaggag
gagaagaagaagaagaagcaagaggaagagcaggagaagaaaaagctgtctcaggttaca
gacactcaggtggtgatgtcccataataaagagaggaggtcgaagagagacgagaagctg
gacaagaagtcgcaggccatggaggagctgaaagccgagcgagagaagaagaagaacaga
acggccgagctcctgaccaaacgacagccgctgaaggccagcgacgtgtactccgacgac
gaggaggaggaagaggaagacgacgataagtcctcggtaaagagcgaccgcagctcgagg
ttgtcgtcctctgatgaagaagaggagaaagaggcgacgccccctaagtctcagccggtg
tcattgccggaggaactgaaccgcatccgtctgtcacggcacaaactggagcgctggtgt
cacatgcccttcttcgctaaaacggtcaccggctgcttcgtacgcatcggcatcggcaac
agcagcagtaaacccgtctacagggtggctgagatcgtagatgtggtggaaacggcgaaa
gtctaccagctcggctcgactcgaacaaacaaggggctgcagttacgacacggcaacgac
acccgagtgttccggctggagtttgtgtccaatcaggaatttacagagagcgagttcatg
aagtggagagaagcgatgcacggtggaggaatgcagattcctaccctggacgagatcact
aaaaaagagcagtccatcaaagaagccgtcaactacaaattcaacgacaaagacatcgag
gatatagtgaaagagaaggacagattccggaaggcgccgccgaactacgccatgaagaaa
acgcaactcctcaaagaaaaggcgatggcggaggagagcggcgacggagataaggtgaag
atgttgcaagatcagttgaacgagctggaggagagagccgaagcattagacagacagaga
actaaaaacatttccgcgatcagttacatcaaccagaggaaccgcagctggaacatcgtg
gagtctgagaaagcgttagtggctgaaggtcagaactccaaaaaccagcagatggaccct
ttcacccgacggcagtgcaaacccaccatggtgtccaacgccagagacccgtcggtccac
gctgctattctcgcacatcttaatcagaaatacggttcgggctccggccaggacaacgcg
cagcagatcaacaaacagcagggttcggcgaaccagagggacaaagacgtcacaaagacc
accagcgacctctctgaagacctgttcaaagttcacgacttcgacgtcaaaatcgacctg
caggtccccagtgctgagacaaagtccctgtcagtgagctccaactccctgccggtgaag
gacggagcccctcgccgctccctcaacctggaggactacaaaaagagacgaggcctcatc
tga
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