Ictalurus furcatus (blue catfish): 128605191
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Entry
128605191 CDS
T09387
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2 isoform X1
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128605191 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128605191 (syf2)
Spliceosome [BR:
ifu03041
]
Complex B
Other components
Prp19-related factors
128605191 (syf2)
Complex C
128605191 (syf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
128605191
NCBI-ProteinID:
XP_053476368
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All DBs
Position
3:complement(2971139..3077246)
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AA seq
239 aa
AA seq
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MASVTEDVCGPAGDEEPTETSSSQKREERLRKFRELHLKRNEARKLNHQEVVEEDKRLKL
PSNWEAKKARLEYELMVDEKKKECAARGEDYHRVKLLEISAEDAERWERKKKKKNPDPGF
AGYAEAQLRQYQRLTRQIKPDMESYERQREECGEDFHPTSNSLIHGMHVPSREAIDRMQE
DVDKQIEKRAKFSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtcacagaggatgtgtgtggaccagccggtgatgaggaaccgacggaaacg
tcatcatcacaaaagagagaggaaaggttgaggaagttcagagagcttcatttaaaaagg
aatgaggcgcgtaaactgaaccatcaggaagtggtggaggaggacaagcggctaaagctg
ccctcaaactgggaggcaaagaaagctcgactcgagtatgagctcatggtggatgaaaag
aagaaggagtgtgcggctcgaggggaggattaccaccgtgtgaaactcttggagatcagc
gccgaggatgctgagagatgggagaggaaaaagaagaagaaaaaccctgatcctggcttc
gcagggtacgccgaggcccagctgaggcaatatcagcggctcactcgacagataaagcct
gatatggaaagctacgaaagacaaagagaggagtgcggtgaagacttccatccgacctcc
aactctctgatccacggaatgcacgttccctctagagaagccatcgaccgcatgcaggag
gacgtcgacaaacaaatcgagaagcgcgccaaattcagccggcgcagagcctacaacgac
gacgccgacatcgactacatcaacgagagaaacgccaagttcaacaagaaagccgagcgc
ttctacggaaaatacaccgccgagatcaaacagaacctggagagaggaaccgcggtgtag
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