KEGG   Ictalurus furcatus (blue catfish): 128605227
Entry
128605227         CDS       T09387                                 
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24 isoform X1
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    128605227 (wdr24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ifu04131]
    128605227 (wdr24)
Membrane trafficking [BR:ifu04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    128605227 (wdr24)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR75_1st ANAPC4_WD40 zf-RING_16 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N DUF1290 DUF4820
Other DBs
NCBI-GeneID: 128605227
NCBI-ProteinID: XP_053476430
LinkDB
Position
1:3913062..3921787
AA seq 771 aa
MEKMASVGTVSGRTMFCLLDAPANAISVCRDATQVVVAGRNIFKIFALEEEGFVERLNLR
VGRKPSLNFSCADVMWHQADDSLLATAATNGAVVTWNLSRPCRNKQEHLFAEHKRTVNKV
CFHPSEAHMLLSGSQDGFMKYFDLRKKESVSTFSGQSESVRDVQFSTKDFFTFAASFENG
NVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTNRAKEIY
CVQTIASVARVKWRPERRWHLATCSMMVDHNIYVWDVRRPYIPFATFEEHKDVATGIVWR
NQHDPDVLLSGSKDSTLYQHMFNDASRPEVRANPEGLSFGLFGDLAFAAKESLMAADGGR
KPCPGGDRRYPIFFFKKHDVMERFAQVSSVLSVFECDPDGGGARMDWFIETASRYQLSGR
PFAELCDHNAKVAKQLNRPQVSTTWTMLRIMYSDPGHPTPPANHNMSKLGNMPLMNSFNT
KDMSAALNERNKENRQDTLETNLNNDENEETEGSDGQAEYLFGEAELDDDDLYSVEHDNQ
AAEEAEFSLPQEAFPLRHEIAEHAPAPELLAEKAESPQASGGETESVCLTPMESFSLISV
SQLLFQPRLLPSFFNAIVKDTLAYYAEQGDVQMAVSALIVLGERIRREIDELTQEHWYMS
YIDLLQRFELWNVSNEVIKLSTCSAITCLNQASTTLHINCSNCKRPMSNKGWICDRCHQC
ASVCAVCHHVVKGLFVWCQGCSHGGHLEHVMEWLKSSNHCPAGCGHLCEYA
NT seq 2316 nt   +upstreamnt  +downstreamnt
atggagaagatggcctccgtcggcaccgtcagtggccgaaccatgttctgcctcctggat
gctccagccaacgccatcagcgtgtgtcgggatgccacgcaggtggtggtggctgggcgc
aacatcttcaagatctttgcgcttgaagaggaaggattcgtggagcggctgaacctgcgc
gtgggccgcaaaccgtcgctgaacttcagctgcgctgacgtcatgtggcaccaggccgat
gacagtctcctggctacggccgccaccaacggcgcggtggtgacgtggaacctgtcgcgg
ccgtgccgtaacaagcaggagcaccttttcgccgagcacaaacgcaccgtcaacaaggtg
tgcttccaccccagcgaggcgcacatgctgctctccggctctcaggacggcttcatgaag
tacttcgacctgcgcaagaaggagagcgtcagcaccttctccggtcagtcggagagcgtt
cgagacgtgcagttcagcacgaaggactttttcacgtttgcggcgtcgttcgaaaacggg
aacgtgcagctgtgggacatccgcagacctgaccgttatgagaggatgttcactgctcac
accggccccgtgttctgctgtgactggcaccctgaggacagaggatggctagcgacgggt
gggcgtgacaagatggtgaaagtgtgggacatgacgaccaaccgcgccaaagagatctac
tgcgtgcagaccatcgcctcggtggcgcgggtcaagtggcggccagagcgtcgctggcac
ctggccacgtgctccatgatggtggaccacaacatctatgtttgggacgtacgccggccc
tacatcccgttcgccaccttcgaggagcacaaggacgtcgccacgggcatcgtgtggcgc
aaccagcacgaccccgacgtactactctccggctccaaagacagcacgctgtaccagcac
atgttcaacgacgccagtcggccagaggtgcgtgccaaccccgagggcctcagcttcggt
ctgttcggagacctagccttcgccgccaaggagagcctgatggcggccgacggtgggcgc
aagccgtgcccgggcggagaccgccgctaccctatcttcttcttcaagaagcacgacgta
atggagcgcttcgcacaggtctccagtgtactcagtgttttcgagtgcgatcccgacggt
ggcggcgccaggatggactggttcatcgagacggcgtccaggtaccagctgagcgggaga
ccctttgctgagctctgcgaccacaacgccaaggtcgccaagcagctcaacagacctcag
gtgtcgaccacgtggaccatgctacggataatgtattccgacccgggtcacccgacacca
ccggctaatcacaacatgagtaaactgggtaacatgcccctcatgaacagtttcaatacg
aaggatatgagtgctgctctgaacgagagaaacaaagagaatagacaggacaccctggag
acaaacctcaacaacgacgagaacgaagaaacggagggaagcgacggtcaggccgagtat
ctgtttggagaggccgagttggatgacgacgacctgtacagcgtggagcacgacaatcag
gcagcagaggaggcggagttttctctcccccaagaggcgttcccgctgcggcacgagatc
gcggaacacgcgccggcgcccgagctgctggccgagaaagccgagtctccgcaggcaagc
ggcggcgagacggagagcgtgtgcctgacgcccatggagtcgttcagcctgatctcggtg
tcgcagttgctcttccagccgcgcctgctgcccagcttcttcaacgccatcgtcaaggac
acgctggcctactacgccgagcagggtgacgtccagatggccgtctccgcgctcatcgtc
ctcggcgaacgaatccgcagggagattgacgagctcacacaggaacactggtacatgtcc
tacatcgacctgctgcagaggttcgagctgtggaacgtcagcaacgaggtgatcaaactg
agcacgtgcagcgccatcacatgtctgaaccaggcgtccaccacgctgcacatcaactgc
agcaactgcaaacgacccatgagcaacaagggctggatctgtgacaggtgccaccagtgc
gcgagtgtatgtgcagtgtgtcaccacgtcgtgaagggtctgttcgtgtggtgtcagggc
tgcagccacggcggccatttggagcacgtgatggagtggctcaagagctccaaccactgc
cctgctgggtgtggacacctgtgtgaatatgcctga

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