Ictalurus furcatus (blue catfish): 128605327 Help Entry 128605327         CDS       T09387                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism ifu  Ictalurus furcatus (blue catfish) Pathway ifu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ifu00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     128605327 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ifu03400]     128605327 (msh6) DNA repair and recombination proteins [BR:ifu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      128605327 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II COX17 Motif Other DBs NCBI-GeneID:  128605327 NCBI-ProteinID:  XP_053476611 LinkDB All DBs Position 3:8585323..8597037 Genome browser AA seq 1428 aa AA seqDB search MYRILQVRVGKYMYVHETRLPPRPLPLCTFPRTAICTACVEEKQLRVSCINFVQLVMAKQ SSIFNFFTKSPPAVAKTKPNPSPTEADVPSLVSKSNSSPKEEAKQAAQNSKKAADKPLKT LAKVGHAKPFGQKATDTNESSSFPFHAGDLVWAKLEGHPWWPCMIVPQPVSGQQMKGRGQ DQRVHVHFFDEPATRGWVRKKYIRQYKGSGSTDAKTGGLFFSGKPVIRRAMELADCVLQD SPEQRLKIPVCMDASDEEAEDEEMEVEQSTPSDEEISEEEVQKVKPSRRSSRAAAEHAQK PKRRRIVVASDSEGSGEEFKPDQGDQAETSSEEEDGVISDVEESIPESEPDSPVKPVKRK RPSEKTAKTKSTAIPSEIHKSNSVSLAADTKSRLSAFSAPDSFESQGSASGKLDGAGVWD HEKLDWLQNGKRKDAQRRRQSDMDYDPTTLYVPEDFLNKVTPGMRRWWQLKSEMFDTVLF YKVGKFYELYHMDAVIGVSELGLTFMKGNWAHSGFPEIGFGRFSDVLVQKGYKVARVEQT ETPEMMEARCKAMVRPTKFDRVVRREVCRVITRGTQTYSVLDGAPSVAESKYLLSVKEKN QEENAGQYHIYGVCFIDSSMGRFYVGQFQDDRHCSRLRTLLAHYVPAQVLFEKGNLSAET QKIFKAALSSAMHESLSAGSQFWDAQKTLKTLVDEDYFKEIKEESSHSSGSALPSPLKAM TSESDSLGLTPKEGYELALSALGGCIFYLKKCLVDQELLSMADFQEYVPVDVEIQQSENA SNFFAQTCQRMVLDGVTLANLEILQNGSTGGTEGTLLEQLDTCCTPFGKRLLKQWLCGPL CNPASINDRLDALEDLMAAPAQATDVTELLKKLPDLERLLCKIHSMGTPLKGQDHPDSRA VFYEEIVYSKRKIADFLSALEGFKTMQEIVSIMESVSVGFQSKLLRQVVILKTRSDEGMF PDLRPELNRWDTAFDHQKARTTGVITPKAGFDPEYDQALSGIKDCERNLQDYLDRQKKRL GCKSLSYWGTGRNRYQMEVPDSVSERSLPEEFEVRSTKKGWKRYSTKQIEHMFSDLQSWE DKRDTALKDCMRRLFYNFDKNYKDWRTAVECMSVLDVLLSLSRYSQSGNGLMVKPEIVLP GNSPHSSPFLDLRGSRHPCVTKTYFGDDFIPNDIVIGCTGNEEEENEDNKKALAPCVLVT GPNMGGKSTLMRQCGLVVILAQLGCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFFVE LSETASILLHGTTHSLVLLDELGRGTATYDGTAIASAVVKELSKRICCRTLFSTHYHSLV EDYTQDCAVKLGHMACMVENECDEDPSQETITFLYKFISGACPKSYGFNAARLADIPEEV IQSGNCKAREFEKSIMALRIFKKVCSFAEDPTANREQFARLVQMIVNL NT seq 4287 nt NT seq  +upstreamnt  +downstreamnt atgtacaggatccttcaggtccgtgttggaaaatatatgtacgttcatgagacgcggctg ccgccccgcccacttcctctttgcactttcccgcgaacggctatctgcacggcctgtgtg gaagagaagcagcttcgcgtttcatgcatcaattttgtgcagctagtcatggcaaagcaa agttccatttttaatttctttacaaagtcgccgccagcagtcgcgaaaacaaaacctaat ccgtctccaactgaagcagacgtgccttctttagtgtctaaatccaatagttcccccaag gaggaagctaaacaagcagcccaaaacagtaagaaggctgcggacaaacccctcaagact ctggctaaagtcggtcatgccaaaccttttggacagaaagctacggatacaaatgagagc tcttcattccccttccatgcgggtgatctggtgtgggcaaaactagaaggacacccatgg tggccttgcatgatagtgccccagccggtgagtgggcagcagatgaagggcagaggccaa gatcagagagtgcatgtccatttttttgacgaaccagcaacgcggggttgggtcagaaag aagtacattcgacaatataaaggttcaggtagcactgatgccaaaacaggtggtttgttc ttcagtggcaagcctgtgattcgcagggcaatggagttggcagactgtgtgctgcaggac agtcccgaacaaagactaaagatacctgtttgtatggatgcctctgatgaggaagcagag gacgaagaaatggaggttgaacaatcaacaccatcagatgaagaaatatcagaagaagag gttcagaaggtgaagcctagcaggcgttcatcacgtgctgcagcagagcatgctcagaaa cccaaacgtcggcgtattgtggtggcctctgacagtgagggctctggtgaggagttcaag ccagatcagggagatcaggcagaaaccagcagtgaggaggaagatggggtcataagtgat gtggaggagagtatacctgaatctgaacctgacagtcctgtgaagcctgtaaaacggaaa cgtccatcagagaaaactgctaaaacaaaaagtacagctataccctcagagattcacaag agcaattctgtgagtcttgcagctgacacaaagtcacgtctgtctgctttttcagctcca gacagctttgagagtcagggcagtgcttcaggaaaattggatggggctggtgtgtgggac catgaaaaattggattggttgcagaacggcaaaagaaaggatgctcagaggaggcgtcag tcagatatggactatgacccaaccactctatatgtgcctgaagacttcctgaacaaggtt acacctggcatgcgtcgatggtggcagctcaagtcagagatgtttgatactgttcttttc tataaagtaggcaagttttatgagctctaccacatggacgctgtgattggtgtcagtgag ttggggcttactttcatgaaaggcaactgggcacattctggtttccctgagataggtttt ggccgtttctctgatgtgctcgtacaaaaaggttacaaggtggcacgtgtagaacagacc gagacccctgaaatgatggaagcacgatgcaaggctatggtgcgtcccacaaaatttgac cgtgtagttcggcgagaggtatgcagagtaatcacccggggcacccagacgtatagtgtg ctcgatggtgcgccttctgtggccgagagcaagtacctgctgagtgtgaaagagaaaaat caggaggaaaatgcaggccaataccacatatatggggtctgcttcattgacagctcaatg ggtcgcttttatgtaggtcagttccaagatgaccgccactgttcccgtctgcgtacctta ctggcacattatgtgccagcgcaggtgctatttgagaagggtaacttgtcagctgagaca cagaagatcttcaaggctgctctgtcctcagcaatgcacgagagtcttagtgctggctca caattctgggatgcccagaaaaccctgaaaaccttggtagatgaagactactttaaagaa attaaagaagagagtagtcattcttcaggatcagctctccccagtcctctaaaagcaatg acttctgaaagtgactcgctaggtcttactcctaaagaaggatatgaacttgctctctct gcacttgggggatgcatattctatcttaaaaaatgcctggttgatcaagagcttctttcc atggctgactttcaggaatatgttccagtggatgtggagatacagcagtcggagaatgca tcaaatttctttgcccaaacttgccaacgtatggtgctggatggagtgacactggccaac cttgagattctccagaatggttctactggaggcacagaaggtactctgcttgaacagttg gacacttgctgtactccttttggcaagaggctgttaaaacaatggctctgtggtcccctc tgtaacccagcatccattaatgatcggttggatgctcttgaagacctaatggctgcacca gcccaagctactgacgttacagaactcctgaagaaacttccagaccttgaaaggttactc tgcaaaatccatagtatgggtactcctctaaagggacaggaccacccagacagcagagca gttttttatgaggagattgtctatagcaaacgcaagattgctgacttcctttcagcattg gaagggttcaaaaccatgcaggaaattgtgtcaatcatggagtcagtctccgtaggattc caatctaaattgctgcgacaagtagtgatcctaaaaacaagaagtgatgagggtatgttt cccgatcttagaccggagcttaaccgctgggacacagctttcgaccatcaaaaagcacgt acgactggtgtgattacacccaaggctggctttgacccagagtatgatcaggctctgagt gggatcaaggactgcgagagaaatctgcaagactacttggatcgtcagaagaagagactt ggctgtaagagtctatcttactggggtacaggacggaaccgctatcaaatggaggttcca gacagtgtttctgagaggagcttaccagaagaatttgaggtgaggtccacaaagaagggc tggaagaggtactcaacaaagcagattgagcatatgttctcagacttgcagagctgggag gacaaaagggacactgcactgaaagattgcatgaggagactgttttacaactttgataaa aactacaaagactggcggactgctgtggagtgcatgtcggttcttgatgtgctgttgagt ttgtcccgatacagtcagagtgggaacgggctgatggtaaaaccagagattgttctgcca ggtaatagcccccattcttcccctttcctggacctcagaggatcccggcatccctgtgtc accaaaacctattttggtgatgacttcatccccaatgacatcgttattggttgtactggc aatgaggaagaggagaacgaagacaataagaaggcactagccccctgtgtacttgtcaca gggcctaacatgggaggcaagtccaccctaatgaggcagtgtggcctggttgtgatcttg gcacagttgggttgctatgtgcctgctgaaagcctgcgcctaacccctgtggaccgagtg ttcactcgccttggtgcctcagatcgtatcatgtctggagagagtactttcttcgtggag cttagtgaaacagccagtatccttttgcatgggaccactcattcacttgttcttcttgat gaactgggtaggggtacggccacctatgatggcacagccatagcaagtgcagtggtgaag gaactgtcaaagaggatctgctgccggactctgttttccacccattaccactcactggta gaagactacactcaagactgtgctgttaagcttggccatatggcctgcatggtggaaaat gagtgtgatgaggatcctagccaggagaccatcactttcctgtacaagttcatcagtggt gcttgtcccaagagctatggatttaatgctgcacgccttgccgatatccctgaagaggtg attcagtcaggaaattgtaaagcccgtgagtttgagaagagcatcatggctctgaggatc ttcaaaaaagtgtgttcatttgctgaagatcccacagctaatcgtgaacagtttgccaga cttgttcagatgattgttaatctgtaa

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