Ictalurus furcatus (blue catfish): 128605352
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Entry
128605352 CDS
T09387
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128605352 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128605352 (herc4)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128605352 (herc4)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
HECT type E3
128605352 (herc4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Glyco_hydro_129
Motif
Other DBs
NCBI-GeneID:
128605352
NCBI-ProteinID:
XP_053476678
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All DBs
Position
3:9820862..9904331
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AA seq
1061 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIIVEPRKCEFFNGKVVRGVGCGRRHTVFLLGDGTVYTCGC
NDLGQLGHDKARKKPEQVMALDAQNIVAVSCGEAHTLALNDKGQVFAWGQASDGQLGLAN
IEECMRVPRTIKSLSEVHVVQVSCGYRHSLALSRRGQIFSWGQNRYGQLGLGKERLCVLT
PQVIHSLQGIPFAQISAGGAHSFALTMSGAVFGWGRNKFGQLGLNDNKDRCFPSLLKTLR
SQRVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNTLNHEVNPRKVFELMGNVVSQVA
CGRQHTLAFIPSSGKIDSFGLGGNGQLGTRYTCNRISPAPVKGQWRAHNDPTPIDSDAEQ
FYCVKRIYAGGDQSFAHCHFPQNGSPPDDLRMRHCNQHVLSLNDDLIQKWLRHGHGRLVP
EMTVEIDDVFSSASCLNGSFLSTSHPDHYHTSSKCPGVDMNMARLLFHRLIQPDYPHISQ
QITASLERHLIPNLCSSPPDIEALRLYLILPECPLFKNPNTYITLTIPFAKAVIHLSSAP
LKVLGNWWSCLDPAVFQGLVELYKEVIVYLLRMQKMGISPSEHRTFTCFLSTCLKFLEIL
HTVNERAGQIIQYDKFYIHELEDLVDIRSDYVTWIQHQMFSMAWDPAGSNKKAMDSQVTL
CKFPFVFDAQAKTTLLQTDAVIQMQMAVDQAERQNFSSLFLPGGMVESVNPCLILMVRRE
NVVEDTMEVLRKSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPKYGMFRYY
KESRLIWFSDKTLEDIDLFHLIGVICGLAIYNMTIVELNFPVALYKKLLKKTPTLEDLKE
LMPVVGRSLQELLDYMEDDVEDTFCLNFTITVENFGETEVLELVPNGMNITVNNHNRQDF
VNAYVDYIFNSSVAPLFNAFYAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWKELEKNT
KYKGEYWPEHPTIKFFWDVFHDLPLEKKKQFLLFLTGSDRIPILGMKSLVLVIQPTGGGE
NYLPVAHTCFNLLDLPKYTSQENLKEKLLQAIEHNQGFNLA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctatgttggggaaatgcctcctatggccagcttggattgggtggaattgatgaagag
atcatagtagagccccgcaaatgcgaattctttaatgggaaggtggtgcgaggtgtagga
tgtgggagaagacacactgtttttctgcttggagatggaactgtgtatacgtgtggctgc
aatgacctgggacagctggggcatgacaaggcacgcaaaaaaccagagcaggtaatggca
cttgatgctcagaacattgtagcagtatcttgcggtgaggctcacactcttgctctaaac
gacaaaggacaagtgtttgcatggggacaggcttctgatggacagctcggccttgccaac
attgaagaatgtatgcgtgtacccagaacaatcaagagtttgtcagaggtccatgttgtc
caggtctcctgtggttataggcattcccttgcactttctaggaggggacagattttttct
tggggacaaaataggtacgggcagttaggactggggaaagagagactttgcgtcttgacc
ccacaggtcatccattctttacagggcatcccatttgcccagatctcagcaggaggtgct
cacagctttgcactcactatgtctggggctgtatttggttggggacgaaacaagtttggc
cagctgggcctaaatgataacaaagatcgatgttttccatccttactgaagacactcagg
tcacaaagggtcgtttatatatgctgtggagaggatcacactgcggcattaacaaaggag
ggaggtgtgttcacatttggagcaggtggctatggccagctgggacacaacaccctaaac
cacgaagttaacccacgaaaggtttttgaactcatggggaatgttgtttcacaagtagct
tgtggtaggcaacataccttggcattcattccatcctctggcaagattgattcttttggt
cttggaggaaatggacaacttggcacacgttacacctgcaacaggataagtcctgctccg
gtaaaaggccaatggagagctcacaatgaccccacaccaatagattctgatgctgagcag
ttctactgtgtgaagcggatttatgctggtggagaccagagctttgctcattgccacttt
cctcagaatggctctcccccagatgatctgcgaatgcgacattgtaatcagcatgtctta
agcttgaatgatgacctcatacagaaatggctgaggcacggtcatggaagactcgtacca
gaaatgacagttgagattgatgatgtattctcatcagcaagttgtctaaatgggagcttt
ctttctacaagtcatccagatcattatcatactagcagcaaatgtcctggggtggacatg
aatatggctcgcctcctcttccacagactcatccagcctgattatccacatatctcacaa
caaatcactgccagtttggagaggcatttgattcccaacctctgcagctctcctccagac
attgaggcactgaggctctacctcatacttccagagtgtcctctgtttaaaaaccccaac
acttacatcacactcaccattccctttgccaaggcagttatccacctcagcagtgctccc
ctcaaagtgcttggtaattggtggtcttgccttgatccagcagtgtttcaaggactagtg
gaattgtataaagaggtgattgtgtatctgctccggatgcagaagatgggaatttcacca
tcagagcacaggacatttacctgcttccttagtacctgtttgaaatttctggagattctg
cacactgtaaatgagcgagctggccaaattattcagtatgacaagttttatatacatgaa
ctggaagaccttgttgacatcaggagtgattatgttacatggatccagcatcagatgttc
tccatggcctgggatcccgcaggaagcaacaaaaaagccatggactctcaggtcaccctg
tgcaaattcccatttgtatttgatgctcaggcaaagaccacgctccttcaaactgatgct
gttatccagatgcagatggctgtggatcaagcagaaagacagaacttcagctctttattc
ctgcctggtggcatggtggagtcagtaaatccgtgcctcattctcatggtgcgcagagaa
aatgttgttgaggacactatggaggttttgcggaagtccaaaaatgttgattacaagaaa
cctctaaaggtgatctttgttggagaggaggctgtggatgctggaggtgtgaggaaagaa
ttcttcctcctcatcatgaaagaactgctggaccctaaatatggcatgttcaggtattac
aaggagtccagactcatctggttttcggacaagacattagaagatatcgacttattccac
ctcattggggtcatttgtggtttggccatttataatatgactatagtggaactaaatttc
cctgtagctctgtacaagaaactcttgaagaaaactccgactttggaggacctgaaggag
ctcatgcctgttgttggcaggagtctgcaagaattattggactacatggaagatgatgtt
gaggatacattctgcttgaacttcacaattactgtggaaaactttggtgaaactgaggta
ttggagctggtgcctaatggaatgaacatcactgtaaacaatcacaacagacaagacttt
gtaaatgcctacgttgactacattttcaactcatccgtggctcctcttttcaatgctttc
tatgctgggttccacaaagtatgtggagggaaagttctggagctttttcagccaaatgaa
ctacaggccatggttatagggaacactaattatgactggaaagaacttgagaagaacaca
aagtacaagggagaatactggcctgaacaccccactatcaaattcttctgggacgtcttc
catgatttacctctggaaaagaagaagcagttcctgttgtttctcacgggtagtgatcga
atccccatcctgggcatgaaaagtcttgtcttggtcattcagccaacgggaggtggagag
aactatcttcctgttgcccacacttgcttcaatcttttagatttgcccaagtatacaagc
caagaaaacctcaaagaaaagcttctacaagccattgaacacaatcaaggcttcaatctg
gcatga
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