Ictalurus furcatus (blue catfish): 128605421
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Entry
128605421 CDS
T09387
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128605421 (six2a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
128605421 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
128605421
NCBI-ProteinID:
XP_053476804
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All DBs
Position
3:13180874..13184891
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AA seq
298 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNSHNALTSSMNGNKTMMGSSDEDKTPIGTPDHTSSSPALLLTSAS
GLQPLHGLAAPPAPSAVPVPSAVTVPSADSMHHQHHHHHGLHDTILNTMASNLVDLGS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccgactttcggctttacgcaagagcaagtggcgtgcgtgtgcgaagtc
ctgcagcagggcggcaacatcgagcgccttggccgctttctgtggtccttgccggcctgt
gaacacctccacaagaacgagagcgtgctcaaggccaaggccgtggtcgcctttcacagg
ggaaacttcagagagctctataaaatcctcgagagccaccagttctcgccgcacaaccac
ccgaaactacagcagctgtggctcaaggcgcactacatcgaggcggagaagctgcgcgga
cggccgcttggagccgtgggcaagtaccgagtgcgtagaaagttcccgctgccccggtcc
atctgggatggcgaggagacaagttactgctttaaggagaagagccgcagcgtgctgagg
gaatggtacacccataatccgtacccttcaccgcgggaaaagcgcgagctggccgaagcc
actggcctgaccaccactcaggtcagcaactggttcaaaaacaggaggcaacgcgaccgc
gcggcggaggccaaagaaagggaaaacaacgagaactccaacacgaacagccacaacgca
ctcacgtcgtccatgaacggaaacaagacgatgatgggcagctcggacgaggacaaaacc
ccaatcggaactccagatcacacgtcatcgagcccagcgctgctgctcacttccgcctcc
ggcctccagcctctacacggcctggctgctccgccggcacccagcgcagtaccagtgcca
agcgccgtgactgtaccaagcgctgactcaatgcaccaccaacaccaccaccaccacggc
ctgcatgacactatactgaacactatggcctccaacttggtcgacctgggctcttaa
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