Ictalurus furcatus (blue catfish): 128605597
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Entry
128605597 CDS
T09387
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128605597 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128605597 (prpf3)
Spliceosome [BR:
ifu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128605597 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
ATP-synt_10
Motif
Other DBs
NCBI-GeneID:
128605597
NCBI-ProteinID:
XP_053477189
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All DBs
Position
1:5056915..5072416
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AA seq
722 aa
AA seq
DB search
MIVVVYWNQTERLKAQETFADLPSMSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALH
CLGKGLDKRKTTDQLRPFLDESAGSFVERLFEALEESRSSRGNKGTAEKNRKRELKDVFG
DEVEAHKDLEGGESAAKRKRVPRFEEVEEPEVLPGPPVESPGMLTKMQIKQMMETATRQI
EERKKQLSITQPRLPLPTPQPAASSMRPLLPPAPGPAQSIAPSQAASFMNDAIEKARKAA
ELQAKIQSTLAMKPGILGAMNNTGPHNLVALANLHAMGIAPPKVEAREITKPTPLILDEL
GRTVDASGKEVELTHRMPTLKANIRAVKREQFKQQLKEKPSDDLESTSFFDPRMAMPQPQ
RQRKAFRFHEKGRFEKIGQRIRTKAQLERLQMEIAQAAKKTGIQASTKLALIAPKKELGE
GDVPSIEWWDSFILPNNIEISAHPVFDNLDFHGITNLVEHPAQMAPPVDMDKPVTLGVYL
TKKEQKKLRRQTRREGQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHV
RAQMAKRQKAHEEANAARKLTAEQRKEKKVKKLKEDLSHGVHIAVYRIRNLHNPAKKFKV
EANANQLYLTGTVVLHKDVNIVVVEGGPKSQKKFKRLMLNRIKWAEPSSKRDDPDGSDDE
GSKKPNKCTLVWEGTAMERSFGDMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLETA
DD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggttgtgtactggaaccagactgagagattaaaggctcaagaaacctttgca
gatctccccagcatgtctttgcccaagcgggaggtggaggagctgcgtccctgggtggag
cgcaccgtgaagaaggtgctgggtttctcggaacccactgtggtcactgcggccctgcac
tgcttagggaaaggtctggacaaaaggaagacaacagaccagctgagaccgtttctggac
gagtcggcaggcagcttcgtagagcggctgttcgaggcgctggaagagagcaggagttcc
cggggcaacaaaggcacagccgagaaaaaccgcaagagagagctgaaggatgtgttcggc
gatgaggtggaggcacacaaagatctagaaggtggtgaatctgcggcgaagaggaagaga
gtaccccgattcgaggaggtcgaagagccagaagttcttcccggacctcctgtggaaagt
cctggcatgctcaccaagatgcaaataaaacagatgatggaaacagccacgcgtcagatc
gaagagcgaaagaagcagcttagtatcactcagcccagactgcccctgcctaccccccag
ccagcagcgtccagcatgcgccctctcctgcctcctgctccaggcccagctcagtccatt
gccccgtcacaggctgccagcttcatgaacgacgccatcgagaaggcacgcaaagctgct
gagctccaggccaagatccagtccacgctggccatgaagccgggcatcctgggagccatg
aacaacacggggccacacaaccttgtggcgcttgctaacctgcatgccatgggcattgca
ccgcctaaagtggaggcccgtgagatcaccaagccgacgccgctcattctggacgagctt
gggagaaccgtcgacgccagtggaaaggaggtggagctcacgcaccgcatgcccactctg
aaagctaatatcagagcagttaagcgagaacagtttaagcagcagctgaaggaaaagccc
agcgatgacctcgagtccacgtccttcttcgaccccaggatggccatgcctcagccacag
agacagaggaaggcgtttaggttccacgaaaagggccgctttgagaaaataggccagcgg
atacgcaccaaggctcagctggagaggttgcagatggagattgcacaggccgccaaaaag
actggcatccaggcatcaaccaaactggctctgatcgcccctaagaaggagcttggtgag
ggtgacgtgccttccatagagtggtgggactccttcatcctgcccaacaacatagaaatc
tctgctcatcctgtatttgataacctggacttccatggaatcaccaatctggtggaacac
cctgcccaaatggcccctccagtggacatggacaagccggtgactctgggtgtgtatttg
acgaagaaggagcagaagaagctgaggcggcagacacggcgtgagggacagaaggagctg
caggaaaaggtccgactcggcctcatgccccctccggaacccaaagtgcggatctctaat
ctgatgcgtgtgctgggtacggaagcggtgcaggatcccacgaaagtggaggcccacgtc
cgagcgcagatggccaagagacaaaaagcccatgaggaggcaaatgcagcacgcaaacta
acagcagagcaaaggaaagagaagaaagtgaagaagctgaaggaagatctgagtcatggt
gttcacatcgctgtctacaggatccgaaacctgcacaacccggccaagaagttcaaagtg
gaagccaacgcaaatcagctgtatctgaccggcaccgtggtgctgcacaaagacgtcaac
attgtcgtggtggaaggaggacccaaatcacagaagaagtttaagaggttgatgctgaac
aggattaaatgggcggagcctagctcaaagagggatgaccctgatggctcggacgacgag
ggatcgaagaagcccaacaagtgcactcttgtttgggagggcacagcgatggagcgcagc
ttcggtgacatgaagttcaagcagtgccccacggagaacatggcgcgcgagcacttcaag
aagcatggtgcagagcactactgggacctggccctgagtgagagcgtgctggagacggct
gacgactga
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