Ictalurus furcatus (blue catfish): 128605624
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Entry
128605624 CDS
T09387
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128605624 (rrp12)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
90S particles
Other 90S particles
128605624 (rrp12)
Pre-60S particles
Other pre-60S particles
128605624 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
128605624
NCBI-ProteinID:
XP_053477234
LinkDB
All DBs
Position
3:19170915..19192462
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AA seq
1284 aa
AA seq
DB search
MVKSGKLRSGTACKLKRWKKGHSSDSNPQTSQHRQAAKSRFFSRPKEKSDLTVDALKLHN
ELQAGSLERKQEDGGLEDVMEETTALTERTSGTFLSGLSDCSNLTFRKVQRYWESNSAAH
KEICAVLAAVTEVIRSQGGKETETEYFAALMMTLEAVESTESLAAVAYLLNLVMKRVPTP
VLIKKFSDTAKAFMDVMSKQATTESVSCVRWILSCLATLLRKQDLSVWSYPSTLQVYHGL
LSFTVHSKPKVRKAAQQGVCAILRGSDCMFGDNVPSHHPAAVTTSKYCIKEMEHAGGSKE
DTTTLHVLGLLKELITTFPLSSVKSCCETLLRLMTLSHVLVTACAMQAFHKLFSGKPNPS
SMSAELNAQIITALYDYIPSDNDLQPLLAWLAVMEKAHVHLSRLQSSLSLGHLPRLFSVS
MSCLLSPHTRVVSAATQTLKTLISECVAPHMAEIGPVLPSVSAGNGLYVCKMFSVVEEGL
SYRFHASWPFVLQILGCFYRAAGKHAHPVMMKSLQSLCDLRATPQFPFCGELDLAVGGAV
ESMGPQVVLSAIPLLITGTDDDLEFPRSWLIPVIRDNVKNTQLAYFASYFLPLSSMLQQR
ADQLEKAGQKLLAKVHQTLQLQIWTMLPGFCTKPTDVVSSFKGIARSLGMAITERPDLRM
CIYQALRTLIRKSCETEEEKAEVGRFAKNFLPILFNVHTQQPAPGERDPSRPAVLATIKD
YLTVTDHKMVGSFLRKALERLSSPDSSEFTRHTVMDLVVAMSAFVDEEAMAQTYAQIKPH
LESKESGIQKKAYRVLEEMCGGEREPCKRFIFANLEQLKVVLLDSLKSTSSPAKRPRLKC
LSHIVKQLNEEHKDFITALLPEVIICTKEVSVGARRNAYSLLVDIGDAFIRFCGNTKDAL
NEYFGHVYIGLTGSVTMITCTVLALTRLVFQYKDSIDVSSLEQLLHNICLLLTCRTREIV
KACIGFIRVIVDVKVLASQVSFILEGIGAMKDDMRRHCRTNLKIILTKLVRKFGCELVKS
MLPAELHRLLVNIRKVEARTQRRKLLKKAEEEGSDSEEDTPKAKTDSIEDILAETDSDDS
EDEKPKKGQKKQVKQKAQAWLKEGVSDEPLNFLDPKAAQRVLSTNPDFKKTRKIEHDFKV
TSDGRLIIKEEEDDDDGSKDDKEVDDILKEVGLKTKKRQKRKTENDLDDDMEIEPQMKYK
AGGSGIHRPLGGRQESGADYKAKKGKGDIKKTGKHDPYAYIPLKKAQLNRRKKAKLQGQF
KGMVRGVKKGALSGKRMQKNKRRA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatctggtaaacttcggtccggaacggcctgtaaattaaagcgatggaagaaa
ggacacagcagcgattcaaacccacagacgagtcaacatcgacaagctgccaaaagccga
tttttcagtagaccgaaagaaaaaagtgatcttacggttgatgctctgaaactgcataat
gagcttcaggcaggttctctggaaagaaagcaagaggatggaggcttggaggatgtcatg
gaggagacgacagccctcactgagaggacatcaggcacatttctgagtggactgtctgat
tgctcaaatctgacttttagaaaagttcagcgatactgggagtccaactctgctgcacac
aaagagatctgtgctgtactggcagctgttacagaagtgattcgctctcaaggtggaaag
gagacggagacagaatactttgctgctttgatgatgaccctagaggcggttgagagcact
gaatccctggctgctgttgcctacctactcaacctggtaatgaaaagggtgcctactcca
gtgttgataaagaagttctcagacacagcaaaggccttcatggatgtcatgtcaaaacaa
gccactactgagtctgtctcctgtgttcgatggatcttgtcctgcctggccactttgctg
aggaagcaggatctctctgtgtggagttatccatccaccctgcaggtgtatcatggtcta
ctcagcttcactgtgcactccaaaccaaaggtgcgtaaagcagctcagcagggtgtgtgc
gccatactgcgtggcagtgactgcatgtttggagataatgtgcccagccatcaccccgct
gccgttaccacatccaagtactgcattaaagagatggagcatgcaggaggtagcaaggaa
gatacgaccacgctgcatgtgctggggcttctgaaggagctgattacgacgtttcctctc
agctcagtgaagtcttgctgtgagactcttcttcgtttgatgaccctgagtcatgtgcta
gtgacggcgtgtgcgatgcaggctttccacaaactcttcagtggaaaaccaaacccctcc
tccatgtctgcagagctcaatgcccagatcatcacggctttgtatgactatatccctagt
gacaacgacttgcagcccctgttagcctggcttgctgtcatggagaaagcccacgtccat
ttatccaggttacagagctctttgagtctgggtcaccttcctcgtctcttttccgtttcc
atgtcctgtcttctttccccacacacacgagtcgtctcagctgccacacagactctgaag
accctgatcagtgagtgtgtggcacctcatatggcagagattgggcctgttctacccagc
gtatctgctggtaatgggctttacgtctgtaaaatgtttagtgttgtggaggaaggtttg
tcctatcgcttccatgcatcatggccttttgtgctgcagatccttggctgcttctacaga
gctgcagggaaacatgctcatcctgttatgatgaagagtctgcagtctctgtgtgacttg
cgtgcgacgccgcagtttccgttctgtggcgagttggatttggcagtagggggcgcagtg
gagagcatgggcccacaagtggtccttagtgctatcccactcctcatcactgggactgat
gatgacctggagttcccacgcagctggcttatcccggtcatcagagacaatgtaaagaac
acccagctggcatacttcgcctcttacttccttcccctgtcatccatgctacaacaaaga
gcggatcaattggagaaggcaggacagaagctgttggcaaaagtacatcagacattacag
ttgcagatctggacaatgcttcccgggttctgcacaaagcccactgacgtggtcagctcg
tttaagggcattgcccgctcacttggtatggcaatcacagagcgccctgatctccgcatg
tgcatctatcaggccctgcgcacactcatccgcaagagctgtgagacagaggaagagaag
gcagaagtgggccgcttcgctaagaactttttgcccattctgtttaatgtgcacacacag
cagcccgcccctggagaaagggacccgtccaggccagctgtgctcgccaccatcaaagat
tacctgacggtcacggatcacaagatggtaggctcatttctgcgaaaggccttggagagg
ctcagcagccctgacagctcggagtttacacggcatactgtgatggatttagtggtggct
atgtctgcatttgtggacgaggaggctatggcacaaacatatgcacaaatcaaaccccac
ttggagagtaaggagtctggtattcagaagaaagcgtaccgggtgttggaggagatgtgt
ggaggagagcgagagccgtgtaagcgtttcatctttgccaatctggaacagctcaaggtg
gtccttctggatagtctgaagagtacatcttcacctgccaaaagacccagactgaagtgc
ctcagtcacattgtgaagcagctgaatgaagaacacaaggacttcatcactgcacttctc
cctgaggttataatttgcacaaaggaagtgtctgttggagcacgcagaaatgcctactcc
ctcttggtggatatcggcgatgcctttatccggttctgtggaaacaccaaagatgccttg
aatgagtactttggccatgtgtacattgggctcactggatcagtcacgatgattacctgc
actgtactggccctcacccgacttgtgtttcagtacaaagactccatagacgtatcgtca
ctggagcagctcctgcacaacatctgcttgctgctcacctgcaggacacgggagattgtc
aaggcctgtataggcttcatcagagtcatcgtggatgtaaaagttctagccagtcaagtg
tcttttattttggagggcattggcgctatgaaagacgatatgagaagacactgcaggaca
aacctgaaaatcattttaactaaattagtccgcaagtttggctgcgagctggtcaagagc
atgctgcctgcagaacttcacagactgcttgtgaacatccgtaaagtggaggccaggacg
cagagacgcaaactgctgaaaaaggctgaggaggaaggttcagacagcgaggaagacact
cctaaagccaaaactgacagtattgaggacatcctggcagaaactgactctgatgactcg
gaggatgagaagcctaaaaaaggccagaagaagcaggttaaacaaaaggcgcaggcctgg
ttgaaagaaggggtgtctgatgaaccactcaacttccttgatcctaaagcagcacagaga
gttctctccaccaaccctgactttaagaagactcgcaagattgagcatgacttcaaggtg
acctcagacgggagattgatcattaaagaagaggaggatgatgatgacggatctaaagat
gacaaggaagttgatgacatactgaaagaggttggcctgaagacgaaaaagagacagaag
aggaaaactgaaaatgatctggatgatgacatggagattgaaccacaaatgaaatataaa
gctggtggcagtgggattcacagaccactgggaggaagacaggagtcaggtgctgattac
aaagctaagaaaggaaaaggtgacattaagaagacggggaagcacgacccatatgcctac
atcccgcttaagaaggcccagctcaaccgcaggaaaaaggccaaactgcagggccagttt
aagggcatggtcagaggagtgaagaagggagcgctgtctggaaagagaatgcagaaaaat
aaaaggagagcctaa
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