Ictalurus furcatus (blue catfish): 128605652
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Entry
128605652 CDS
T09387
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128605652 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ifu01002
]
128605652 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128605652 (taf2)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128605652 (taf2)
Peptidases and inhibitors [BR:
ifu01002
]
Metallo peptidases
Family M1
128605652 (taf2)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128605652 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
128605652 (taf2)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128605652 (taf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
HEAT_2
HEAT_spiro
Peptidase_M1
Peptidase_M1_N
SR-25
CCDC106
Motif
Other DBs
NCBI-GeneID:
128605652
NCBI-ProteinID:
XP_053477280
LinkDB
All DBs
Position
1:5156343..5173972
Genome browser
AA seq
1196 aa
AA seq
DB search
MNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVIGYVELTIFPSVVNLNRIKLNSKQCR
IYRVRVNELEAPFLYNDPTLEVCHHESKQRNLNYFSSAYAAAVSAVDPDAGNGELSIKVP
AELWKQGDEMKVLKVYIEFSLDQPKGGLHFVVPDTEGSMAERGAHVFSCGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLMETVYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEVFEFYEEILTCRYPYSCFKTVFVDE
AYTQVSSYASMSIFSTNLLHSGMIIDQTPVTRRCLAQGLAQQFFGCFISRMSWSDEWVLK
GISGYIYGLYLKKTFGVNEYRHWIREELDRIVEYELKTGGVLLHPTFAVGKEKDGPTPHL
HFSIKHPHTLSWEYYRMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLLSTSWFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YMSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMAVLRKVELAQADFMWQYQLRYERDVVAQEEAIVALEK
FPTAASRLALTDILEHEQCFYKVRMQACFCLAKIANSMVSTWQGPPAMKSLFTRMFCCKS
CPNIVKTNNFINFQSYFLQKTMPVAMALLRDVQNLCPKEVLNFILDLIKYNDNGKNKFSD
NYYRADLIEALTNSLTPAISINNEVRTVDSLNADVKLILEEVTRFLNMEKLLPSYRNAIT
VSCLRAIRMLQKNGHIPSDPSLFKAYAEYGHFVDVRVAALEAVVDYTRVDRSAEEFQWLL
DMVQNDPVHYVRHKILSMLSRNPPFTKAAESPLCTEALVDQLWKLMNSGTSHDWRLRCDA
VNLYHTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKSDQEGPDLTPEIIFVGSVKEE
HVVMEPVLGGIALTPQGLKRKAETPLASPPEPGQVLQDEPPGKIVAKGRFPMQEDEDIDM
DTVHDSRAFIYHHLNILDRPSTPGREPPVVEQVVMPMPSTPVQTFAKEAASSSSSSKHHH
HHHHHHHEHKKKKKKHKHKHKHKHKHESKDKDKEKERDLHSFGNSPASGRSLSLSD
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaagaaggacaagggctttgagagtccgcgaccttataaattaacccaccag
gtggtgtgcataaacaacatcaacttccagaggaagtcggtcattggctatgtggagttg
accatcttccccagcgtggtgaacctgaaccgcatcaagctgaacagcaagcagtgccgc
atctacagggtgcgggtgaacgagctggaagcgccgttcctttacaacgaccccacgctg
gaggtctgccaccacgagtccaagcagcggaatctgaactatttctccagtgcctatgct
gcagcagtgagcgctgtggatcctgatgctggaaatggagagctctctattaaagtgccc
gctgagctgtggaagcagggagacgagatgaaggtgctgaaggtgtacatcgagttctcg
ctggaccagccgaagggcgggctgcacttcgttgtgcctgacacggagggcagcatggcc
gagaggggagctcacgtcttctcctgcggataccagaattccacacggttctggtttccc
tgcgtggactcgtactcggagctgtgcacgtggaagctggagttcaccgtggacgcctcc
atggtggccgtgtcatgtggtgacctcatggagaccgtctacactcacgacatgcgcaag
aagacttttcattacgtgctgcccatcccgaccgccgcgcccaacatctcgctggcagtg
gggccgttcgagatcctcgtggacccctacatgcatgaggtgactcatttctgcctgcct
cagctgctgccgctgcttaaacacaccatgtcctacctacacgaggtgttcgagttctat
gaggaaatcctgacctgccgttacccgtactcctgcttcaagaccgtgtttgtggacgag
gcctacacgcaggtctcctcctatgcctccatgagcattttcagtacaaacctgctgcac
agcggaatgattatagaccagacgccagtaacacgccgctgtctggcacagggcctggcg
caacagttcttcggctgcttcatctcacgcatgtcatggtctgatgaatgggtgttgaaa
ggcatctcgggctacatctacggcctgtacctgaagaagacgttcggcgtcaacgagtat
cgccactggatcagggaggaactggacaggattgtggaatatgagctgaaaacaggaggc
gtcctgctgcaccccacgttcgccgtgggaaaagaaaaagacggccctactccgcacttg
catttctccatcaaacacccgcacacgctgtcctgggagtactacagaatgttccagtgc
aaggcacacctggtcatgaggctgatcgagaaccggatcagtatggagttcatgctgcag
gtgttcaacaagttgttaagcctggccagcacggcgtcgtcgcagaagtaccagtcgcac
atgtggagccagatgcttctgtccacctcttggtttctcaagtccatttccaacgtgtcc
gggaaggacattgggcccttgatcaagcaatgggtagaccagagtggggtggttaagttc
tttgggagctttgccttcaacaggaaaaggaacgtgctggagctggagatccgtcaggat
tacatgtcttccggcactcagaaatacgtgggccccatcaaagtgactgttcaggagctg
gatggatccttcaaccacacgctgcagattgaagagaacagcctcaagcatgacatcccc
tgtcattccaaaagcaggaggaacaagaagaagaaaatccctctgatgaatggagaagag
gtggacatggacctgtctgcgatggatgcggactcgccgctgctgtggatccggatcgac
cccgacatggcagtgctaaggaaggtggagctggcgcaggccgacttcatgtggcagtac
cagctgcgctacgagcgagacgtggtggcacaggaggaggcgattgtggcgctggagaaa
ttccccacggccgcctctcgcctcgccctcaccgacatcctcgagcacgagcagtgcttc
tacaaagtgcgcatgcaggcatgcttctgcctggccaagattgccaactccatggtgagc
acctggcaaggccctccagccatgaagtccctcttcacgcgcatgttctgctgcaagagc
tgccccaacattgtcaagaccaacaacttcattaacttccagagctacttcctgcagaag
accatgccggtggctatggctttgctcagggacgtgcagaatctctgtcccaaggaggtg
ctcaacttcattctggacctcatcaagtacaacgataacgggaagaataagttttcagat
aattactaccgcgctgacctgatcgaagccctgaccaactccttaacaccggccatcagc
atcaataacgaggtacgcacggtggacagtctgaacgccgacgtcaagctcatcctggag
gaagtgacgcgcttcctcaacatggagaaactgctgcctagctacaggaacgccatcacc
gtcagctgcctacgggccatcaggatgctgcagaagaacggacacatccccagcgacccg
agcctgtttaaagcctacgcggagtacggccattttgtggacgtgagagttgctgcgctc
gaggctgtggtcgactatacgagagttgacaggagcgccgaggagtttcagtggctgttg
gacatggtccagaacgatcctgtgcactacgtcagacacaagattctcagcatgttgtcg
aggaatccccccttcaccaaagccgcagagtctcctctgtgcaccgaggctctcgtggac
caactgtggaaactgatgaactctggtacctcccatgactggcgtttgcgctgtgacgct
gtaaacctgtaccacacgctgtttggtctgaccaggccctcgtgtctgccgctgccagaa
ctcggcctcgtcctcaacctgaaagagaagaaggccgtcctgaaccccaccatcaaatca
gatcaggaaggtcctgacctcacacccgagataatcttcgttggcagtgttaaggaggag
catgttgtcatggagccggttttgggtggcatagccctcaccccacagggcctgaagagg
aaggcggagactcctttggcttcgccccccgaacctgggcaggtgctgcaggacgagccg
ccaggaaaaatagtcgccaagggccgatttccaatgcaagaggacgaggatatcgacatg
gacacggttcacgacagccgagcgtttatctaccaccacctgaacatcctggataggccg
tcaacaccaggtcgagagcctcctgtcgtggagcaggtcgttatgcccatgccatccacg
cctgtccagaccttcgctaaggaggccgcgtcgtcctcttcctcctccaagcaccaccac
catcaccaccaccaccaccatgagcacaagaaaaagaagaagaagcacaaacacaagcac
aagcacaaacacaagcatgaaagcaaggacaaggacaaagaaaaggagcgcgacctccac
agcttcggtaacagccctgcgagcggccgctcgctctcgctgtccgactga
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