Ictalurus furcatus (blue catfish): 128605664
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Entry
128605664 CDS
T09387
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128605664 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128605664 (lrit1a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_5
DUF6161
C2-set_3
Motif
Other DBs
NCBI-GeneID:
128605664
NCBI-ProteinID:
XP_053477294
LinkDB
All DBs
Position
3:complement(20265740..20274591)
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AA seq
638 aa
AA seq
DB search
MMVIVFFALLLASGGFPPAHTSCPFRCSCLYHTLSDGSKARSVICNNPEISLVPANFPSD
TSKLRIEKTAIKRIPSEAFKYLPNLEFLWMSFNVLSSVNVDSFRGLNSLEELRLDGNFLT
AFPWESLKYMPNIKLLDLHNNKLSSVPTEAAKYIRPLTYLDLSSNNLLTMPSEVLTTWMA
VKPIQGAESSKIILGLHDNPWLCDCRLYDLAQFQKTPSLSVAFIDTSLRCAAPESLSGVL
FSDADLRRCQEPKVHSAVSRIRSTAGNNVLLRCGAVGVPMPNLTWRRADGKILNGTVKQE
NSKDGIVWSILNVPTVSFHDSGKYICKATNYAGSAEALIVLIISKSPKLDNAAGTEKKIK
EDIQNPVEKDKIIIKYISPSPSSVPVTTRPMGYTGPYPGMQSDSAPETGTNAQPTSPDRL
LETNLSNLAANASSLQQDFDRIVRSVKVIGDTDYTVCLMWRAPKANNTTAFSVLYAVFGE
RDMRRINVSPGNNRIIIEGLVPKTKYIACVCVKGLIPKKEQCVIFSTDAAASANGTQKLI
NVVVISVACVIAVPLTVVVCCGALKRKIQKLLSKKSKDIQDSYVTFESLSPSTKAKGLEG
DYLSKLNPEESNRLISARSSLDSESITKTEEQPNDYLC
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatggttattgtcttctttgctctgttgcttgcatcaggtggatttccgcctgcacat
acctcatgtccttttcggtgcagctgcctctatcacaccctgagtgatggatccaaggcc
aggagtgtgatttgtaacaatcctgagatatccctggttcctgccaacttccccagtgac
acatccaaactcagaatagaaaaaacagctataaagaggatccccagtgaagcatttaaa
tacctccccaatctggagtttttgtggatgtccttcaatgtattgtcatcagtgaacgtg
gacagcttccgtggactgaacagtctggaagagctcaggcttgatggaaatttccttact
gcttttccttgggagtccttaaagtatatgcctaacataaagctccttgacctgcacaat
aacaaactctcttcagtccctacagaggcagcaaagtacataagacctttaacatacctg
gatctctccagcaataacctgctgacaatgccgtctgaagtccttactacttggatggca
gttaaacccatccaaggagcagagagttcaaaaattattcttggactccatgacaatcct
tggctttgtgactgtcggttgtatgaccttgcccagttccaaaagactccatcactgtct
gtggccttcattgacactagcctgaggtgtgctgctcctgagagtctctcaggagttctg
ttcagtgatgctgacctgagacgatgccaggagcccaaggttcattcagctgtatcccgc
atcaggagcacagcgggcaacaatgtgttactgcgatgtggtgctgttggtgtccccatg
cccaatctgacatggagaagggcagatgggaaaatattgaatgggacagttaaacaagag
aactctaaagatggaattgtttggtctattctaaatgtgcctacggtctccttccacgac
tctgggaaatacatttgcaaagcaaccaactatgccgggagtgcagaggctttgattgtt
ttaatcataagcaagtctccaaagttagacaatgcagctggaactgaaaagaaaatcaaa
gaagacatacaaaaccctgttgaaaaagataaaattattatcaaatatatttccccaagt
ccatcctctgttcctgtaactacaagacctatgggttacactggtccctatcctggcatg
cagagtgacagtgctccagagactgggacaaatgcacaaccaactagtcctgatcgactg
ttagagaccaatctgagcaacctcgcagctaatgcatcctctctgcagcaagactttgac
aggattgttcgctcagtcaaagtgattggcgatacagactataccgtgtgcctaatgtgg
agagctccaaaagccaataacacgactgcctttagtgtgctgtatgcagtatttggagag
agggacatgcgcagaatcaatgtcagtcctgggaacaatcgaatcatcattgagggcttg
gttccaaaaaccaaatacattgcctgtgtgtgtgtaaagggtttgatccctaaaaaagag
cagtgtgtaatcttctccacagatgcagcagcaagtgctaatgggacccaaaagcttatt
aatgtagttgtaatatctgttgcctgtgtgatagctgtgcctcttactgtggttgtctgt
tgtggagcacttaagaggaaaatccaaaaacttctgagcaaaaagtccaaagacattcag
gattcatatgtaacatttgagagtctctcccccagcacaaaagccaaaggcctggagggg
gactatctgtccaaactcaacccagaggagtccaatagattgatatcagctaggtctagc
ctggactctgagtcaattactaagactgaagaacagccaaatgattacttgtgctga
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