KEGG   Ictalurus furcatus (blue catfish): 128605748
Entry
128605748         CDS       T09387                                 
Symbol
zgc:152968
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    128605748 (zgc:152968)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ifu03009]
    128605748 (zgc:152968)
Ribosome biogenesis [BR:ifu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    128605748 (zgc:152968)
SSDB
Motif
Pfam: EloA-BP1 UPF0184 YwqH-like
Other DBs
NCBI-GeneID: 128605748
NCBI-ProteinID: XP_053477437
LinkDB
Position
3:32133078..32149709
AA seq 1283 aa
MVQKLLKPEPQSPAESASPALHSPLCTTSTPAVQELLKSSETPPTPTPMFPSAGLFSETD
CPFLTWGGCERPYCPYKHIKEEDRTGVCAGSARATAEKGHGNHTAARRNFHNQEQSHTCL
SELERINKQIEAVRNEVEKEQKRLSRYQSEQAESAGASSEEYLVTRKTLSKDQNGNQLKC
KKATGGARKYVVDRTKPKTDLEYDPCSNFSADLRSGSSTDKMKSTNKADVEHDQRDKGKG
KSVSADPVPSPPCNFEDSDEEGELVIDIPTFEIDGNKGSPIQSSSASENAHFMKITSESS
EMAHLDTDIENKAEKIKPLKKGMTSIGEQQESLYKETDLVKRRHPMLQKEKMPSVRVLAV
GSIPIEDEQKPSVHPRMAKEEPESSKRMMEIDNSPAENNQVLHKSLKQNSAASKNDECEE
KILNYATVNSPELHEHARSSSVACLSQVFQSEKPTPANSVNAGVHEEKAQNIENVLDDIS
ICLDHLRRESENITCLQDVDALLLDPVHSAPSCSKIHGDYSLQPVAQKLQRQTEPEIKPN
NWLSGHINKMDTMPLTHSTEIPQKTSVFQDYPSTTSSLPAINKDPGSCKNIPTSVETNWP
FAHKVQAEPVQNVPLYNSGTDTAMVPSPQMELNPAATSMDLTGGQILEKPPALLGATDDK
ITVDSSSSEELNYSDLDLSESDPMEECYRIFMEANQAEDPTVQGDMPVSGWMVKPALAEK
KRVAHVAKFEVSKSKAQVIVPLRDGGSQLPMPSRSQQCQKRATSLTAAVKGCQSFIAANA
PKRVLTSTVIHPTAVPNNYANIFPVGATWQIGPNLHLIVPEGSCAVPVTLIPAVAMPAAR
PVHPLAPKPQPTKPANYTPAKQMNNLNLSHKCSIIQSIPTKRKAKGRSEVGVKVPHDVRQ
RYVNLFVEEFLKTSATVQDAFEKALAEEKTLFDRSVNKLKYLSIAVNALKRLKNQNAAPA
KFSSERDAQASRGNVPLSSQALLQNGDTTLYDQLKEHILTEAMLRENNYPHKHPDKPGFA
IQYGDTKKGSADVSRRICCRCGTSFCISQTGKHTRTEECNYHYGKVMENRVPGGVETRYS
CCENAVGSPGCQVFKLHVHDAVSLQGFVSSLPQTHVGCPGIYAIDTEMCYTTQGLELVRV
TVVNSSLQVIYDTFVNPTNEVIDYNTRFSGVSEEDVKNSSSSLQDVQAVLLSFISEGTIL
VGHGLENDLSALKIIHSTVVDTSVVFPHRLGPPHKRQLRSLTAEYLRKIIQESVEGHDTK
EDATACMELMLWKVKEDGKGKRW
NT seq 3852 nt   +upstreamnt  +downstreamnt
atggtacagaaactgctcaaaccagaaccgcaaagccctgcagaaagtgcatctccagct
ctgcactcccctctctgcacaacatctacaccagcagtacaagagctgctaaaatcatca
gagactccacccaccccgaccccgatgtttccttccgctggactcttctctgaaaccgac
tgtccttttctcacttggggcggatgtgagcgaccttactgtccatacaaacacatcaaa
gaagaagaccgcacaggtgtttgtgccggaagtgcgcgcgcgacagctgaaaaaggtcat
ggcaatcataccgctgctagaagaaacttccacaaccaggaacagagccacacttgtctt
tcagagctggaaaggatcaacaaacagattgaagcagttagaaatgaagtggagaaggaa
caaaaaagactgtcccgctaccagtctgaacaggctgagagtgctggtgctagctcagaa
gaatatcttgtgaccagaaaaactttgtctaaagaccagaatggaaaccagctgaaatgt
aaaaaggccactggtggtgcccgcaaatatgttgttgatcgcaccaaacccaaaactgat
ctggaatatgacccttgttcaaatttttctgctgatctgcgatctggcagttcaacagat
aaaatgaagtcaaccaataaagctgatgtggaacatgatcagcgggacaaaggaaagggt
aagagtgtgtctgctgatccagttcccagtcctccttgcaattttgaggattctgatgag
gagggggaactagtcattgacattccaacctttgaaattgatgggaacaagggatctccg
atacagagctcatcagccagtgaaaatgcacattttatgaagataaccagcgaatcttca
gaaatggcccatcttgacactgacatagaaaacaaagcagaaaagattaagccattgaag
aagggtatgactagcatcggtgaacaacaggagtctttgtacaaggagactgatttggta
aaacgaagacaccccatgctgcaaaaggaaaaaatgccttctgtaagagtactcgctgtt
ggaagtatacctattgaagatgaacaaaaaccctcagttcatcccaggatggccaaggaa
gaaccagaatcatccaagaggatgatggagattgataactcacctgcagaaaataatcaa
gtgcttcataagagcttgaaacaaaactctgctgcatccaagaatgacgaatgcgaggag
aagatcttgaactatgcgactgtcaattctccagaattgcatgaacatgcaaggtcctct
tcagtggcatgtctttcacaggttttccaatcggaaaaacctactcctgcaaacagcgtg
aatgctggtgttcatgaagagaaagcacaaaatattgaaaatgttctagacgatatttcc
atttgcctggaccacctgagacgtgaaagtgagaacatcacttgccttcaagatgtggat
gctctcctccttgaccctgtccattctgctcccagttgctcaaagatacatggagattat
tctttacagcctgtcgcacaaaagctgcaaaggcaaacagaacccgagataaaaccaaat
aactggctctcgggtcacattaacaaaatggacaccatgccccttacacactcaacagag
atcccacaaaagacatcagtatttcaggattacccttccaccacttcctctttaccagcc
ataaataaggatcccggctcttgcaagaacattccaacttctgttgaaacaaactggcca
tttgcacataaagtccaagctgaacctgttcagaacgtacctctgtacaattctggaact
gacacagcaatggttccttctccacagatggagctaaacccagctgctacatctatggat
ttgactgggggtcagatcctggagaaaccacctgctctactgggtgcaacagatgataag
ataacagttgactctagttcttcagaagagctcaattattcagacctagacctttcagag
agtgatcccatggaagagtgctacagaatctttatggaagccaaccaggctgaagatccc
acagttcaaggtgacatgccagtaagtggatggatggtcaagccagctcttgctgagaaa
aagagagtagcccatgtagcgaagtttgaggtcagtaagagcaaagcacaggtcatcgtg
ccccttagagatggcggttcccagctgcccatgcccagccggagtcagcagtgtcagaag
agagcaacatctcttacggcagcagtgaaagggtgccaatcctttattgcagccaacgca
cccaagcgagtcctcacatctactgtcattcatccaactgctgtgccaaacaactatgca
aacatcttcccagttggagcgacctggcaaatcggcccaaaccttcacctgattgtcccc
gaagggagctgtgctgtaccggtcacactgatccctgctgttgctatgcctgcagcacgt
ccagtccatccactagccccaaaaccacagcctactaaaccagccaattacacacctgca
aagcaaatgaataatttaaacctgtcccataaatgttcaatcattcagtcaattcccacc
aagcgcaaagcaaaaggacgttcagaggtcggcgtaaaggttcctcatgatgtacggcag
cggtacgtaaatctgtttgtggaggagttcctgaaaacatccgccactgtgcaagatgcc
tttgaaaaggccctagcagaagagaagactttgtttgatcgcagcgtcaataaactgaag
tatctaagcatagcagtgaatgcactcaagaggcttaaaaatcaaaatgccgctcctgcc
aaattttccagtgaaagagatgcacaagcgtctagaggaaatgtgccactcagttctcaa
gcactactgcaaaatggtgacaccacactgtacgatcagctgaaggagcatattctaacc
gaggccatgttgagggagaataactatcctcacaaacaccctgataaacctggattcgcc
attcagtatggtgacaccaaaaagggcagcgctgacgtttccaggagaatctgctgtcgc
tgtggaacttctttctgcattagccagacaggaaaacacactcgcacagaagagtgcaac
tatcattatgggaaagtcatggaaaacagagtaccaggaggtgtggagacgcgctatagc
tgctgcgagaacgcagtcgggtcgcctgggtgccaagtgttcaagctccatgtccatgat
gcagtgagtctccaaggctttgtaagcagcctccctcagactcatgtgggctgcccaggg
atttatgctattgatactgaaatgtgctataccacgcagggtctggaactggtgagggtc
acggtggtgaacagcagtctgcaggtcatctatgacacctttgttaatcctactaatgag
gtcatcgactacaacaccaggttctcaggagtcagtgaggaggatgtgaagaacagcagt
tcatctttgcaagatgtgcaagctgtgcttttgagcttcatcagcgagggaaccattctc
gttggacatggtttggaaaatgatctctctgctctgaaaattatccacagcacggtggtc
gacacgtctgtggtgttcccccatcgcctgggtccgccgcacaagagacagctcagaagc
ttgacagccgagtatctgaggaagataatccaagagagcgtggagggacatgacaccaaa
gaggacgcgacagcgtgcatggagctcatgctctggaaggtgaaagaggatggtaaaggg
aagagatggtga

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