Ictalurus furcatus (blue catfish): 128605773
Help
Entry
128605773 CDS
T09387
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128605773 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128605773 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128605773 (pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128605773
NCBI-ProteinID:
XP_053477478
LinkDB
All DBs
Position
3:22481262..22488320
Genome browser
AA seq
322 aa
AA seq
DB search
MPQRIVMQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQASLCIGDTIIAIDGEPTEGM
THLEAQNKIKGCVEEMVLSIDRSELKTWSPLVSEDGKTHPYKMSLASESQEVKHIGSAHN
RSALPFNSPAGSKVVTSQYNNPAVLYSSDNIKNFNSAVGGAKTIMTSSEPSNNPDLSKPV
QPKPSIAVDSEVYKMLNENQESCEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTTKI
ASSLGSTEKLSICDKCGSGIVGMFVKLRDKYRHPECYVCTDCGTNLKQKGHFFVEDKIYC
EKHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcggattgtcatgcagggtcctggaccttggggatttagactggtcggtggt
aaagatttcgaacagcctctgactatttcacgggtaaccccaggaagtaaagcagcccag
gccagcctctgtattggcgacactattattgccattgatggtgagccgacggagggaatg
actcacttggaagcgcagaataagatcaagggttgtgtcgaagaaatggtcctctctata
gacagatcagaactgaaaacatggtctccccttgtctctgaagatgggaagacacatcca
tacaagatgagtctggcctcagaatcgcaggaagtgaaacacataggttctgctcacaac
aggagtgctcttccgttcaattcgccagctggttccaaggtggttacaagccaatataat
aatccagctgtcttgtactcttctgataacatcaagaactttaacagtgctgttggtggt
gccaagaccattatgacatccagcgaaccaagtaataatccagatctctccaaacctgtc
cagccaaaaccatcaattgctgttgactccgaagtctataaaatgctgaatgagaaccaa
gagtcatgtgagcctccacgtcagtctgcatcattcaaagtcctgcaggaaatccttgag
actggtgattctgacaagccatctgggtttagaagtgtgaaagcacccactacaaaaatt
gcttcttccctaggcagtactgagaaactctccatctgtgacaaatgtggctcagggatt
gtgggcatgtttgtcaaactgcgagataagtaccgccaccctgagtgctatgtctgcact
gactgcggaacaaacctgaaacagaaaggacactttttcgtcgaggacaagatttactgt
gaaaagcatgcacgtgaacgagtgacccctcctgagggttatgatgtcgtcactgtcttc
ccaaaatag
DBGET
integrated database retrieval system
