Ictalurus furcatus (blue catfish): 128605824
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Entry
128605824 CDS
T09387
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128605824 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128605824 (tbp)
03021 Transcription machinery [BR:
ifu03021
]
128605824 (tbp)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
128605824 (tbp)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128605824 (tbp)
RNA polymerase III system
TFIIIB
128605824 (tbp)
RNA polymerase I system
SL1/TIF-1B
128605824 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
128605824
NCBI-ProteinID:
XP_053477567
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All DBs
Position
3:23387866..23392861
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AA seq
300 aa
AA seq
DB search
MEQNNSLPPFQQSIASPQGAMTPGLPIFSPMMPYGTGLTPQPVQNTNSLSLLEEQQRQQQ
QQVASQQQGGIVGTSGQTPQLYHSQAVSTTTALPGNTPLYTTPLTPMTPITPATPASESS
GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM
VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ
FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagcttgcctccgttccaacaaagcattgcgtcacctcagggcgca
atgacacctggtttgcccatctttagtccaatgatgccatatggtacagggcttacacca
cagccagtacagaacaccaacagcttatcactcttagaggagcaacagaggcagcagcag
cagcaggtggcatctcaacagcagggtgggatagtgggaacatcaggtcaaactcctcag
ctttatcactcacaagcagtttccaccaccacagcactgccaggaaacacccctctctac
acaacccctctaacacccatgacccccatcactcccgccacacctgcctcagaaagctct
ggcattgtccctcaactacaaaatattgtctcaactgtgaacttaggatgtaaacttgat
ctgaagacaatagcccttcgagccaggaatgctgagtataatcctaagcgttttgcggcc
gtcatcatgcgaatacgagagcccagaacaactgctctgattttcagttcgggcaagatg
gtttgcacgggagctaagagtgaggagcagtctcgtctggctgccaggaagtacgcaaga
gtagtgcagaaactcggtttccctgccaaatttcttgacttcaagattcagaacatggtt
ggaagttgtgatgtcaaattcccaatccgactggagggcctggttctcacccatcagcag
ttcagcagttatgagccagagttattccctggtttaatctacagaatgattaagcccaga
attgtgcttttaatatttgtttcaggcaaagttgtactcacaggtgcaaaggtgaggggt
gaaatctatgaagcatttgaaaatatatatcctatcttaaaaggattcagaaagacaaca
taa
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