Ictalurus furcatus (blue catfish): 128605859
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Entry
128605859 CDS
T09387
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128605859 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ifu04030
]
128605859 (valopa)
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128605859 (valopa)
G protein-coupled receptors [BR:
ifu04030
]
Rhodopsin family
Vision
Opsin
128605859 (valopa)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
128605859
NCBI-ProteinID:
XP_053477641
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All DBs
Position
3:24510376..24529582
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AA seq
376 aa
AA seq
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MGSFGTGVSGVNYTEVADVLQPEDPFSGPVKSIAPWNFKVLAAWMVVITSLSLSENFLVM
LVTYKFKQLRQPLNFLIVNLSLADFFMSLIGGTLSVVTNYRGYFFLGSWACVLEGFAVTF
FGIVGMWSLATLAFERYFVICRPLGNVRLQVKHAVLGLLFVWTFSFIWTIPPVLGWSSYT
VSKIGTTCEPNWYSGDPHDHTFIITFFVTCFILPLAVIIVCYSKLLRKLRKVSNSHGRLV
NARKPDRQVSHMVVVMIVAFVVAWTPYALFSFIVTVHPTIYLDPIMAAVPAFFAKTAAVY
NPIIYVFMNKQFRKCLVQLLSCSGNTTVEVNQSTDRAGMIGVLRCTGMVPPCSQDSWDRL
RIYFDPAQDKAITEDE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgtttggcacgggagtgagcggtgttaattacacagaagtagctgatgtgctc
caaccagaagatccattttccggacccgtgaaatccattgctccgtggaactttaaagtg
ctggcagcatggatggtcgtgatcacgtcgctgtctctgtccgagaactttctggttatg
ttggttacctacaagtttaaacaacttagacagccgttaaactttctcattgttaattta
tcgctggcagactttttcatgtcactgatcggtgggactttaagtgttgtcacaaattac
cgtggctattttttcttggggtcctgggcgtgcgtgctggagggatttgcggtcactttt
ttcggtatagtgggtatgtggtccctggctacccttgcatttgagagatactttgttatc
tgtcgtccattgggaaatgtccgtctgcaggtcaaacatgcagtactgggactgctgttt
gtctggaccttctcttttatctggaccatcccacctgtactgggctggagcagctacaca
gtcagcaagatcggcaccacctgcgaacccaactggtactctggtgacccgcatgaccat
actttcattatcacgttctttgtcacctgtttcatcttgcctctggctgtgatcattgtg
tgttacagtaaattgctgcgcaagctgagaaaggtgtccaactctcatggcaggttggtg
aatgcccggaagcctgaccgacaggtgtctcatatggtagtggtgatgattgtagccttc
gtggtggcctggacaccatacgcactgttctctttcatcgttactgttcaccccaccatc
tacttagaccctataatggctgctgttcctgctttctttgcaaaaactgctgctgtctac
aaccccatcatctacgtctttatgaacaaacagttcaggaagtgcctggttcaactgctc
agctgcagcggcaacaccacagtagaggtgaaccagtctactgaccgagcaggcatgatc
ggtgtcctgcgatgtactggcatggtcccaccttgctcccaggattcctgggataggctc
cggatctactttgaccctgcccaggataaagcgattactgaagatgaatga
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