Ictalurus furcatus (blue catfish): 128605874
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Entry
128605874 CDS
T09387
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128605874 (btaf1)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128605874 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_2
TPR_Trm732_C
TOR1L1_N
HEAT_EZ
Arm
Motif
Other DBs
NCBI-GeneID:
128605874
NCBI-ProteinID:
XP_053477680
LinkDB
All DBs
Position
3:25444321..25472320
Genome browser
AA seq
1861 aa
AA seq
DB search
MAVSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLLSKVLIYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPAPKPKEESRAEDMSPEDSSTDRLSFYRFDISRLLRHGASLLG
SAGVEFEVQDDMSAEVDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDYTCTT
NVNRSQTGKGAVFQSFRSNTPMQAAEFIDSEFRPGMSNRQKNKAKRMAKLVAKQRSRDLD
PNEKSNDSFEGEPEEKRRKTTNVVIEQPAAENKVLIDNIPDNSSLFEETQEWPLESFCEE
LCNDLFNPSWEVRHGAGTGLREVLKCHGAGGGKLVGSTSEQLSQQHQDWLEDLVIRLLCV
FALDRFGDFVSDEVVAPVRETCAQTLGMALRHMTECGVTMTVNVLLKLLTEDQWEVRHGG
LLGIKYALAVRQDLISQLLPRVLPAITDGLQDLDDDVRAVAAAALIPVVEGLVQLQPAKV
PFIVNTLWDALLELDDLTASTNSIMTLLSSLLTYPQVLHCSMQQSLTILVPRVWPFLRHT
IASVRRAALETLFTLLSMADQSCAMWLNPILQDMLRHIFQSCILESNQEILDLIQKVWGE
LLRQAPQQYVVAASCPWMGAWLCLMMQAPHIPIDINMLLEVKARSKEKASGKSRQGGPQV
KETVQEYIGGADTITEDPVSRDYVVTRARLMAAKLLGALCSCICDPRLNSSTQEIRPAES
LAQLLLFHLNSKSSLQRVAVSMVLCEWASLQKECEVVSSVVQPRLLAILSEHLYYDEIAI
PFTRMQNECKQLIALLADAHIDVREKINCSVFTIDQANELVTSIFSEATASLNLKSRQLQ
SLDSKRQQACSTVAETSAEWQQMHLRVHTFAACAMVGLAALPDKLNPLVRPLMEAVKKEE
NTLVQGYAASSIARLLQLCTERTPCPNSKIIKNLCSSVCVDPMLTPNAECPVPPHTPPTQ
DGCKATVSEKDGMHHMVNKTKGIITLYRHQRAAFAITSKRGPAPKPPKTSPNDPPPGSSI
STETDESKKPILIQRRGAEFSLMTIARHFGPGLTKDLPCLWESMIGPLKALVDMLGCNSR
QLLEKGDLVAQELVNSLQVLEVTTGAMAQELISLLLEQLPLLCACLQHPYTAVRHMAARC
VGVFSKIATMETMSCFLEHVLPWFGAIDDRTKQEGAIEAMACVMEQLDVDIVPYIVLLVV
PVLGRMSDPSDSVRFMATQCFATLIRLLPLEAGIPNPPTMSDDLIRQKARERHFLEQLLD
SRKLENYTIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDH
YLRAQEYARTKAIDCCPLPSIVVCPPTLTGHWVDEVGKFCTKDYLNPLHYTGPPTERARL
QHQVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLSANYRI
ILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAM
EALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVNVDDAFS
TAAQEDEDKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEHKRISEQLASQNSSLRDI
QHAPKLSALKQLLLDCGLGSSGSSDVSTEAVVAQHRVLIFCQLKSMLDMVEHDLLKPQLP
TVTYLRLDGSVPAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNP
MRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENSSLQSMG
TDQLLNLFTLDKDGKVEKSDAASSSSGKTSMKSVLDGLGELWDQQQYEAEYDLDNFMLSL
H
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctcgaggctagagcgtctgttcatcttgttggacactggcacaactcctgtg
acgaggaaagccgccgctcaacagctgggagacgtagtcaagctccatccacatgagcta
aataatctattatcaaaggttttaatatatttgaggagtcccaactgggacacgcgaatt
gcagctggtcaggcagtggaggccatagtgaaaaatattcccgaatggaaccccgctccc
aagccaaaggaagagtcccgagcagaagacatgtctcctgaggacagctctacagacaga
ctcagtttctacagatttgacatctcccgtttgctcagacatggagcttcgctgctcggc
tccgctggtgtagagtttgaagtacaggacgacatgtcggctgaagtggaccccaaggaa
cgactggcccgacagaggaagcttctgcagaagaagcttggtctggatatgggtgctgct
ataggcatggatacagaggagctatttaatgatgaagacttagactacacctgtaccacc
aatgtaaatagatcgcagactggcaagggggctgtgttccagagtttccgcagcaatacg
cccatgcaggcagccgagtttatagactctgagttccggcctggcatgagcaatcgtcag
aagaacaaggctaaaaggatggccaagctcgtggcaaagcagagatccagagatctggac
cccaacgaaaaaagcaatgacagcttcgaaggagagcctgaagagaaacggcggaaaacc
acaaacgtagtcattgagcagccggctgctgagaacaaagtcttaattgataacattccc
gacaactcaagtttgtttgaggagactcaagagtggcccttggagagcttctgtgaagag
ctttgtaatgacctctttaatccatcctgggaggtgcggcacggtgcaggcacaggcctg
agagaggtgctgaagtgtcatggtgcaggaggagggaagctggtgggcagcacttcagaa
cagttatcccagcagcatcaagactggttggaggacttggtcatcaggcttctatgtgtc
tttgctctggaccgctttggagactttgtgtctgatgaggttgttgcaccagtgagagaa
acttgtgcacagacactgggcatggccttgagacacatgactgaatgcggtgtcaccatg
accgtgaacgttttgctgaagctgcttacagaggatcagtgggaggttcggcatggagga
ctgttgggcatcaaatacgcccttgctgtcagacaggatcttatttcgcaactgcttcct
cgagtacttccagccatcaccgacgggctccaggatctggatgatgacgtgcgtgcagta
gcagctgctgctcttatccctgtagtggagggactggtgcagctacagcctgctaaggtt
cctttcatagtgaacacactgtgggatgctctgctggagcttgatgacctcacagcttct
acaaacagcatcatgactttactatcatccctgctcacataccctcaggtccttcactgc
agcatgcagcagtcactgaccattttggttcctcgggtgtggccatttcttagacacacc
atcgcttctgtacgacgtgctgccttagagacccttttcactctgctgtccatggctgat
cagagctgtgccatgtggctgaaccctatcctacaagacatgctgaggcacatatttcaa
tcctgcattctcgagagcaaccaagagatactcgatctcatccagaaggtgtggggtgaa
ctgttacggcaggcccctcagcagtatgtcgtagcagccagctgtccatggatgggtgcc
tggctctgtttgatgatgcaagcacctcacattcccattgacatcaacatgctattggag
gtcaaggctcgatccaaggagaaggcgagtgggaagtctcggcagggtggaccgcaggtg
aaggagactgtgcaagagtacatcgggggagcggacaccatcactgaggacccagtctcg
agagactatgtagtgactcgtgcccggctcatggctgccaaactgctgggagcactgtgc
agctgtatctgcgacccacggttaaacagctcgactcaagagattcggccagcggagtca
ttggcccagcttctcctattccacctcaactctaagtcatccctgcagcgcgttgctgta
tccatggtgctgtgtgagtgggcatccttacagaaggagtgtgaggtggtgtccagtgtg
gtccagcctcgtctgttggccatcctgtctgagcatttgtattatgatgaaatcgccatc
cccttcacacgcatgcagaacgaatgcaagcagctcatcgcactccttgctgatgctcat
atcgacgtgagggagaaaattaactgtagtgtcttcaccatcgatcaggccaacgagctg
gtgactagcatcttctctgaggccacagcgtctttgaacctgaagtctcggcagctgcag
tcgttggacagtaagcggcaacaggcgtgctctacggtggctgagaccagtgctgagtgg
cagcagatgcatctacgcgtgcatacttttgcggcctgtgccatggtaggcctggcagcg
ctgccggacaagctcaacccgctggtgcggccccttatggaggctgttaagaaggaggag
aacaccctggtacagggatatgctgcctccagcatagcccgcctgctccagctctgcaca
gagcgcacaccctgccccaattcaaagatcattaaaaacctgtgcagctcggtgtgtgtg
gaccccatgctcacacccaatgcagagtgccctgttcctccacacacacctccaacacag
gatggctgcaaagccactgtgtctgagaaagatggcatgcaccacatggtgaataaaaca
aaaggtatcatcactctttaccgacatcagagagcagcatttgccatcaccagcaagaga
ggccctgctcccaaaccgccaaaaacctcacccaatgaccctcccccaggcagctccatc
tccacagaaactgatgagagtaagaagccgattctcatccagaggagaggtgcagagttc
tcactgatgactattgcaagacactttggccctggtctcaccaaggatttgccctgtctc
tgggagtctatgattggcccactgaaggctctagtggacatgctgggttgtaattccagg
cagctcttggagaagggtgacttggtagctcaggaactggtcaactctctccaggtgttg
gaggtcaccacaggagccatggctcaggagctcatatctctgctgttggagcagctacct
ctgctgtgtgcatgtctccagcacccgtacacagctgtgcgtcacatggctgctcgctgt
gttggcgtgttcagtaagatcgccactatggaaaccatgagttgcttcctggagcacgtg
ctgccatggttcggggcgattgacgaccggaccaaacaggagggagcaattgaggcaatg
gcttgtgtgatggagcagctggacgtggacattgtaccctacatcgtgctgttggtggtg
cctgtgctgggccgcatgagcgatcctagtgacagtgtgcgcttcatggccacacagtgt
ttcgccactctcatacgtctgctccctctggaggctggcatccccaacccgcccacgatg
tcggatgacctcattcgtcagaaggccagagagcgtcactttctggaacagctattggat
agcagaaagctagagaattacacaatccctgtccctattaaggcagaactcaggaaatat
cagcaggatggagtgaactggttgtctttcttgaataagtacaagctgcatggaatcctg
tgtgatgacatgggtttggggaaaacccttcagtccatctgcattctggctggagaccac
tacctcagggcacaggagtatgccaggaccaaggctatagactgttgtcctctgccctct
atagttgtgtgcccccctactctgacaggccactgggtggacgaggtaggcaagttctgc
actaaggactacctgaaccctctgcactatacaggtccccctacagagagagcacgatta
cagcaccaagtgaaaaagcacaaccttgtggtagcgtcgtacgatgtagtgcggaacgac
atcgacttttttaggaatataaaatttaattactgcatcctcgatgaaggtcatgttatt
aaaaatgggaagaccaaattatccaaagctatcaagcagctgtctgccaactacagaatt
atcctctcaggaactcccattcagaataatgtcctggagctgtggtctctctttgacttc
ctgatgccaggctttctgggtacggagcgccagtttgccgcccgttatgggaagcccatc
cttgctagccgagacgccaagagttcgtctcgggaacaggaagcaggggttttggctatg
gaggctctgcatcggcaagtgctaccctttctcctgaggaggatgaaggaggatgtcctc
caagatcttccacccaagattatacaagactactactgtaacctgagtcccctacaggtt
cagttgtatgaggactttgccaagtctcgtgctaaggtgaatgtggacgatgccttctcc
acggcagctcaagaggatgaggacaaacccaaactgaaggccacaggacatgtgttccag
gcactgcagtacctcaggaagctgtgtaaccatccagcgctggtcctgacacctcagcat
cctgagcacaagcgcattagcgagcagctcgcctcccagaattctagcctccgggacatc
cagcatgcaccaaaactttctgcccttaaacagttgctgctggactgtggtctgggttca
tccggctcctcggatgtcagtacagaggctgtggtggctcagcaccgtgtgctgatcttc
tgccagctgaagagcatgctggacatggtggagcatgatctgctgaagcctcagctgcca
acggtcacctatctgcgtctggacggcagtgtacccgcaggcctgcgccattccatcgtc
tccaggttcaacaacgacccttcaatagacgtgctgcttctgacaacacacgtgggtggt
ctgggcttgaacctcacaggagctgataccgtggtgtttgtggaacatgactggaaccca
atgagagacctacaggctatggaccgtgctcaccgaataggacagaaacgtgtggtgaac
gtgtatcgtctgatcactcgtggcactttggaggagaagatcatgggtctgcagaagttt
aagatgagcatagcgaacactgtgatcagccaggagaactctagcctccagagcatgggc
acagatcagctgttgaaccttttcaccctggacaaggacggtaaagtcgagaagagcgac
gcggcatcctcgtcctcagggaagaccagtatgaagtctgtactggacggcctgggggag
ttgtgggaccagcagcagtatgaagcagagtatgacctggataatttcatgctgtcactg
cactaa
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