Ictalurus furcatus (blue catfish): 128605918
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Entry
128605918 CDS
T09387
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04010
MAPK signaling pathway
ifu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128605918 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128605918 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128605918 (nfkb2)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
128605918 (nfkb2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
128605918
NCBI-ProteinID:
XP_053477759
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All DBs
Position
3:26674222..26690263
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AA seq
915 aa
AA seq
DB search
MAGALRMDGNQYGMKNFDNGFDMDISYHQLMSTFDIKSEPCIPETVHGPYLQIIEEPKQR
GFRFRYECEGPSHGGLPGASSERNRRTYPTVKVFNYVGHARVEVQLVTHTEPPRVHAHSL
VGKQCNENGTCSIDVGPNDLTAQFSNLGILHVTKRGVVDVLTKRLKEEKKRAKQPGYHFS
DTEEQAIVREAKELGKSMDLNIVRLKFTAYLKDSNGAFTRALKPVVSNPIYDSKSPNASN
LKISRMDKTCGSVMGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAYGDFSPTDVHKQYA
IVFKTPPYHKEIERPVTVFLQLKRKKGGDCSEPKQFTYVPQYPDKEEVQRKRMKALPQPY
DHWRGPQGGAGGLGRGAGGFGGPGGGGGGGLLGAGFQFNNVDGTGYYGGSCGGFSGGTQM
AGSAPHPDNAQEKQQQQQEMPTSLAAQQQLVQIASALQKHSTAAAKLSAKALLDYCSTGD
VRFLLAMQRQLCGVQDENGDTPLHLAIIHQKPEVATKLIQTIIKTPQFKFINKFNHLNQT
PLHLAVITQQPKLVEILLRVGADPTLLDSDGRTAVHLAAHAGDEAVLRVLLNMLGERHSH
LLNTADFSGLYPLHLAVRKGGERCLRVLVEAGAKINMPEQKSGCTALHLAVKENLFKVVC
SLITELKADINACTFGGNSPLHLAASLGSPPLCSMLIAAGADKQLENDEPLFCYSSSSDE
EDQGERRDDGEGLVEKDIAEHVQELSISSERSRVNPRKRPAVGHTPFDLANCQKVKDLLD
STKPNHLSSKKTKKSTEEVSQSLDNETVNKLCGILNKCQVPWKELAEKLGMLTLAHLYTD
SPSPCQNLLENYQLSGGPIEGLVDALQSLGLKEGVQLLRARQPSEDKQSADTTVDSGFGS
QEADTSAVDNDCETN
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctgagaatggacggaaatcagtacggcatgaaaaattttgacaacggg
tttgatatggacatctcctatcatcagttaatgtccacgttcgatattaaaagtgaaccc
tgcattccagaaacagttcatggaccttacttacagataattgaggagcccaaacaaaga
ggcttccggtttcgttatgagtgtgagggtccatctcatgggggtctaccaggcgcttcc
agtgagaggaacaggcggacatatcccactgttaaggtgtttaactatgtgggtcatgct
cgcgtcgaggtgcagctcgtgacgcacaccgagccacctcgtgtccatgcacacagcctt
gttggaaaacagtgcaacgagaacggaacgtgcagcatagacgtgggtcctaatgacctc
acagcacagttcagcaatttgggtattcttcatgtcactaaaagaggagtggtggatgtt
ctgacaaagagactgaaagaagagaaaaagagagcgaagcagcctggataccattttagc
gatacagaagagcaggctattgtgcgagaagcaaaagagctgggcaagagcatggacctt
aatatagtgaggttaaagttcacagcttaccttaaggacagcaacggagcattcaccaga
gctttgaaaccagtcgtgtccaaccccatctatgacagcaaatctcccaatgcgtccaat
ctcaagatctcacgcatggacaagacttgtggctcggtgatgggaggggatgagatcttc
cttctgtgcgacaaagttcaaaaagatgatattgagattcgtttctatgaggaggatgat
gagggaggctgggaagcatacggtgatttctctcccactgatgtacacaaacagtatgcc
attgtctttaaaacgccaccatatcacaaagagatcgagcgacctgtcactgtctttctg
caactcaagaggaagaagggtggggactgcagcgaacccaaacagtttacctacgttcca
caatatccagataaagaggaggttcagcggaagaggatgaaggctcttccacaaccctat
gaccactggcggggaccacagggtggagcagggggcctgggcagaggagctgggggcttt
ggaggtcctggaggaggtggaggaggaggattattgggagcaggatttcagtttaataat
gtggatgggacgggctactacggtggcagctgtggtggattttcaggaggcacacagatg
gcaggatctgcaccacatccggataatgcccaggaaaaacagcagcaacagcaagagatg
cccaccagcttagctgcacagcaacaactcgttcagattgcctcggctctacagaagcac
tccaccgcagcagccaagctcagtgcaaaggccctgttggattactgcagcacaggggac
gtacgcttcctcctggccatgcagagacaactttgtggagtgcaggatgagaacggagac
accccattacacttggccattatccaccagaagccagaagtggccacaaagcttattcag
actatcataaagactcctcaattcaaattcatcaacaagttcaaccacctcaaccagacc
ccgctgcatttggccgtgatcacccagcagcccaagctggtggagatcttgctaagagta
ggagcagaccctaccttactggacagcgacggacggacagcagtgcatctggctgctcat
gccggagacgaggccgtcctgagagttttgctaaacatgctaggagagcgccattctcat
ctgcttaacaccgctgacttctcaggtctgtacccactgcacctggctgtgagaaaagga
ggcgagcgctgcctgcgtgtgctggtggaggccggggccaagatcaacatgcctgaacag
aagagcggttgcacagcactacacctggctgttaaggagaaccttttcaaagtggtctgc
agtctcattactgagctgaaggctgacattaacgcatgtacgtttggaggaaacagtcca
ctgcatctggctgccagtctcggctctccacccctctgctccatgcttatagcagcaggc
gcagataaacaactggagaatgatgagccactcttctgctactcctcctcctctgatgag
gaagatcagggtgaaaggagagacgatggagaaggactagtcgagaaggacatagctgag
catgtacaagaactgtcaatatcatctgagagaagtcgagtcaacccacgcaagagacca
gcagttggacacactccttttgacctggccaactgtcagaaggttaaagatctgttggat
agtacaaagccaaatcacctttcatccaagaagacaaaaaagagcactgaagaagtgagc
cagtctctggacaacgaaacagtcaataagctgtgtggaatcctcaacaaatgccaagtg
ccatggaaagagctggcagagaaactgggcatgctcaccctggcacacttgtacacagac
agcccctccccctgccagaaccttctagaaaactaccagttaagtggtggtccaatagag
gggctggtggatgcgttgcagtctcttggtctgaaagaaggggtccaacttctgagagcc
aggcagcccagtgaggacaagcagagtgcagacacaacagtggacagcggctttggcagt
caggaagcagacacttcagctgtggataatgactgtgaaacaaactga
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