Ictalurus furcatus (blue catfish): 128605960
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Entry
128605960 CDS
T09387
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128605960 (ssrp1b)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128605960 (ssrp1b)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
128605960 (ssrp1b)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
128605960 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
HMG_box_2
SSRP1_C
HMG_WDHD1
YABBY
Motif
Other DBs
NCBI-GeneID:
128605960
NCBI-ProteinID:
XP_053477850
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All DBs
Position
3:28202926..28224377
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AA seq
750 aa
AA seq
DB search
MTFIRRSRVPGFPKEQLWKESPVSVRGEAVTVCFPTWGTSSGPRTPCFAVSGFFFFLFNL
LTSRERKEVRLNDGRLRFSKQMVVYKSSKTGKVDSIPVPELSQAQWRRVCLGHGIKLSTS
TGHVYKYDGFKDTDFEKISEYFKDNYKVELTEKDMCVKGWNWGTAKFNGPLLSFEVSDTP
VFEIPLSSVSQCTTGKNEVTLEFHQNDDTEVSLMEVRFYVPPTTGDEGADPVEAFAQNVL
SKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLP
HKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDINLTLNMSEDEVERRFEGKLTKNM
SGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPP
VHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVNAKKLSIK
NRGFKEGMKVRDDMYSDSDEDQHDAYLERMKQEGKIREEANDSDDSEAGSDESFNPGDED
DDVAEEYDSKASESESSAEDADSEEDRRKKPVKKAKTVKEGKHKKEKKTKDSSAPKRPMS
AYMLWLNSSRDRIKAENPGISVTEILKKAGEMWKQLSKDKKEEWEGKAEEAKKEYERAMK
EYRESSGGTSKKAKKKGGKSEERKKKKVGGAREREKNRAAGNDSFKSPEFISSEESSSES
TRGKGRKRKGSDDEEKQATSTPSSEESGSD
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgacatttatcaggaggtcaagggttcctggttttcccaaggagcaattatggaaggag
tctccagtgtcagtcagaggtgaagctgtaactgtatgttttccaacatggggaacgtct
tcaggaccgaggacaccttgctttgcggtttcaggcttctttttttttttgttcaattta
ttaacttcaagagagagaaaagaagtgaggctgaatgacgggcgtctgcgtttcagtaag
cagatggtggtgtataaaagcagtaagacgggcaaggtggacagtatccctgtcccagag
ctcagtcaggcccaatggaggagagtctgcctgggccatggcatcaaactctccaccagc
accggacacgtgtacaaatacgatggcttcaaagatactgactttgaaaaaatctcagag
tatttcaaagataattacaaagtggagctgactgagaaagacatgtgtgtgaaaggctgg
aactggggcactgctaaattcaacggcccattgttgtcgtttgaagtgagtgacactcct
gtgtttgagatcccgctctccagtgtatcccagtgtaccactggaaaaaatgaagtcact
ctagagtttcatcagaacgatgatacagaggtgtcactcatggaggtgcgtttttacgtc
ccgcccactacaggagatgagggggcggaccctgtagaggcatttgcccagaatgttctt
tctaaggcagatgtgatccaggctacaggagacgctgtgtgtattttcagagagctgcag
tgtctcacacccaggggaaggtatgatattcgtatctaccccaccttcctacatctgcat
ggtaagacgtttgattacaagatcccctataccacagtgctgcgcctcttcctgctccca
cacaaagaccagagacagatgttcttcgtgatcagtctggatccccccattaaacaggga
caaacccgctaccactttctcatcctgctattttccaaggacgaagacatcaacctcacc
ctcaacatgagcgaggacgaggtagagaggcggtttgagggaaagctgactaagaacatg
tctggctctctatatgagatggtcagcagggttatgaaggctctagtcaacaggaagatc
acagtgcctggaaacttccagggtcactctggtgctcagtgtatcacttgctcctataag
gccagctcagggctgctgtatcctctggagagaggcttcatctacgttcacaagccgccg
gtgcacctgcgctttgaggagatcgcctgtgtgaactttgccaggggcaccacgaccaca
cgctcctttgactttgaaattgagaccaaacagggcaaccagtacaccttcagcagtatt
gaaagagaagagtatggaaagttgtttgattttgtcaatgctaagaaactgagcatcaag
aacagaggcttcaaagagggtatgaaggtcagagacgacatgtacagtgactcggacgaa
gatcagcatgacgcttacctggagcgcatgaagcaggaggggaagatccgtgaggaggcc
aacgacagcgatgactcagaggctggcagcgatgaatcatttaaccccggagatgaagat
gatgacgttgcagaagagtatgacagtaaagcctcagaaagtgaaagtagtgctgaagat
gcagacagtgaagaagacaggaggaagaaaccagtcaagaaggccaaaactgtgaaggag
ggaaagcacaaaaaagagaagaagacaaaggacagcagcgcccccaagcggccaatgagt
gcctatatgctgtggctaaactccagcagagatcgcattaaagcagaaaaccctggaatc
tcagtcactgagattttaaagaaagccggtgagatgtggaagcaactgagcaaagacaag
aaagaggagtgggaagggaaagccgaggaagcaaagaaagaatacgagcgagcgatgaaa
gagtacagagaaagcagtggaggcacctcaaaaaaggcaaaaaagaaaggaggaaagagt
gaggagaggaagaaaaagaaggtaggtggggcaagggagagagagaagaacagggcagct
gggaatgacagctttaagagtccagagttcatctccagtgaggagagttcgtccgagtcc
acccggggaaagggccgcaagcgcaagggttcggatgatgaagagaaacaagcgaccagc
actcccagctcagaggagtctggctcagactga
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