Ictalurus furcatus (blue catfish): 128606011
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Entry
128606011 CDS
T09387
Name
(RefSeq) ras-related protein Rab-33B
KO
K07920
Ras-related protein Rab-33B
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128606011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128606011
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128606011
04031 GTP-binding proteins [BR:
ifu04031
]
128606011
Membrane trafficking [BR:
ifu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
128606011
Others
Specific organelles associated proteins
Auto phagosome
128606011
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128606011
GTP-binding proteins [BR:
ifu04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
128606011
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
SRPRB
G-alpha
MMR_HSR1
ATP_bind_1
AAA_22
PduV-EutP
NPHP3_N
AAA_16
NACHT
Motif
Other DBs
NCBI-GeneID:
128606011
NCBI-ProteinID:
XP_053477928
LinkDB
All DBs
Position
3:complement(29232473..29236091)
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AA seq
214 aa
AA seq
DB search
MDSCEFWIPVVCRTCKIIVLGDAGVGKTSLTQLYCTGHFPDKTDSTIGVDFRERVLHVGG
EKIKVQLWDTAGQERFRKCMVQHYYRNVHAVVFVYDVTNVSSFRSLPLWMEECQQHLLGP
DVPRVLVANKADLVTSNVASTIEQARHLAEVHSMPFYLYSAKSGNREQVDAIFSKLVLQI
TRQRRKKTEAVRSFKLTPKVNVEEEKKEKWTCNC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtgcgagttttggatcccggttgtatgtcgcacctgtaaaataatcgtgctc
ggagacgccggtgtgggaaagacgagtctgactcagctctactgcaccggacacttcccc
gataaaaccgactccaccatcggcgtggacttccgagagagagtgctgcacgtggggggc
gagaaaatcaaggtgcagctgtgggacacggcgggtcaggagcgttttcgcaagtgcatg
gtacagcactactaccgcaacgtacacgcggtcgtctttgtctacgacgtcactaatgtg
tcttcgttccgcagtctgcccctctggatggaggaatgtcaacagcacttgcttggacca
gatgtgccccgtgtccttgtggctaacaaagctgatttggtgacctcgaacgtggcgtcg
accatcgagcaagcacggcacttagctgaggtccactcgatgcccttctacctctattca
gctaaaagtggcaacagagagcaggtggacgccatcttcagcaaactggtactgcagata
actaggcaacgaagaaaaaaaacagaggcagtcaggagttttaaactgactccaaaggtc
aacgtcgaggaagaaaaaaaggagaaatggacctgcaactgctga
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