Ictalurus furcatus (blue catfish): 128606072
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Entry
128606072 CDS
T09387
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
128606072 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
128606072
NCBI-ProteinID:
XP_053478046
LinkDB
All DBs
Position
3:complement(31773324..31814664)
Genome browser
AA seq
3138 aa
AA seq
DB search
MAGCLQRTRFCGTQTLLKCLLVLFSLGLCFCTVQADPSDSAFHYRHRSGPNAETILVATN
GIRVPFGRSVYLDPINDLVTEVKPGDRCHITVLDNDPLAQRPGMLTPKKFPCEFGAKEVK
YTHFGSRSPSKDQVKLQLRYDSHTDTVVIPFMLEVEVVFQQLEILTRNMPLVVEKLNGQS
NPIDKKGLEFAFEDGVTKCKVATLVGTGGLPRYGTLSDNSVNGQMIDCDEFVKKGIRYQH
TATTKSPNRDYIPMLVEVQDNDGNTIQQEHFQIMVRIKEGVENTPPKASFIAMMMMEVDQ
FVMTAITSDMLAAEDVESLPDDLIFNITSPLGHQQGYIISTDNHNLPITSFYQRDIKDLK
IAYKPPSEDSDAERIFQIEFEIVDTDGAVSDTFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRPLSSSQNLEISDEDNLEDVKITVIDGLKHGEMTVLGSRRKFFTPADLDSGIVIYQHD
GSDTYSDNIIFRMTDGKNEVEFLFPITIAPTDDEPPIINANTGIVLFKNEMMQISPFILS
ATDIDSEDSTIKFILEEPYSTIGELLLRQVEPPADTSSWKFSEADEMFEQVVTEWSQQDI
LDGKLFYRHKGPHSTTTVTDQFVFRVQDDNDPPNQSGEHTFTIKIHPVDDIPPSLYPDTT
LHMTVKEYELTFFRKKFLRYTDLDCDDRDLKYIIIKPPKDIDENNPVPLGAIVLTDSPDT
IITEFTQAQVNHHKIAYKPPDQELGITPKVVQFTFVVEDTAGNSADGLFTIFLQPVDNKP
PVITNTGFTVLERSTYIITKNELNASDQDTENENIIFKVIQIPTYGQLQYLGIDMSNGET
FILEDIESGRLAYIHGGEESLSDVIKIDVSDGFHEVPIIIKINIKPVDDESPTIMLPAGL
LGASIDVLENGATEITSNVIQGQDEDTDDLMLTFIVEEPPRLGEIMVNGVPAERFTQQDI
INGVVVYVHTSGEIGPIKEHDSFNLTISDLSDEWVVGRNKVQGVRVHVTILPIDSIAPVV
SVGAQFVVVEGEKNVITLEHIGAEDVDTDNDDILCTIIVQPTSGYVENISPAPGSEKSRA
GTAITAFNIKDVSLSHIYYVQSIHKGVEPVEDRFTFHCSDGINFSERHFFPIVIIPANDE
KPEIFIREFVVMEGMSLVIDTPILNAADADIPGDELEFEIIKNPKHGNIVQQLSTGSTPV
VKFTLEQIKEASNIVYEHDDSETKEDSFEIRLTDGKHTVEEKVLIMVIPVDDETPRMTIN
DGLEVEIGETKVISNRVLKATDLDSEDKELTYIMRYGPGQGYLQRITKHGDVIGNISTGM
NFTQDEIDKQLIQYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGKVTLTTDLLSTTDINSPDEYLSFTITRAPSRGHLESTDHPGVPISTFTQLQLA
GNKIYYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTINKLMVEEGET
KLITPFELTVEDRDTPDNLLRFVVTQVPVHGQLLYNGTRVITTFTKQDLNENLISYKHDG
TETNEDSFSFTVTDGTHSDFYVFPDTVYETRKPQMMTIQINTVDNGMPQIVVNKAASTLR
VLHTGHLGFLITSKALKAEDRDSPNKVLKYYVSEAPLHGFIINIALGNDSIKTFTQADID
DMKICYVLLDASNATSDIFYFTVEDNGGNKLKAQPFRLNWAWISLEKEYYLVDEDAKFLE
VTLKRRGYLGETSFVSIATKDGTAEKDKDFRGKAQKQIQFNPGQTTATWRVKIFTDQEFE
TSETFEIQLSEPVMAVLEYPDKATVEIVDPGDESTVFIPQAEYLIEEDIGELLVPVRRSG
DVSQELMVICYTQQGSATGTIPSTVLSYSDYITRPEDHSSVLRFDKDEREKLCRIIIIDD
SLYEEEESFNVSLSMPMGGQVGASFPSAKVIILADSNDEPALYFGETEYTVDESAGYVEV
IVWRTGTDLSKTATVTVRSRKTDPVSAEAGLDYVGISRNMDFAPGVTMQTFRVTILDDLG
RPELEGPEKFELVLRMPMNAVLGEPSKTVITINDTITDLPRMQFKETEYKVDESDGQVRA
MVYRSGDISQKSTVRCYTRQGSAQVMMDYNERPNTDASIITFMPGENEKPCVVTLLDDSI
HEDDEEFRLVLGTPKSKSKYGAALGEQKDTLVTITDKKDKAIIRFSEVKYSVQEPQVPGE
IAVVKIPVVRLGDTSKVSVVRVHTKDGSATSGEDYNPLSQDVEFKEGETEHVVEVQVLYD
GQREIREAFTVHLKPDEYMVAETQMSKAIVYIEEMDSVADVTFPAVPQVVSLLTYDDTAR
AKEHPNPSTGYPVVCVTACNPKYSDFDKTGSICAVENINDTLTQYRWLVSAPTGPDGVTS
PMREVDTNTFFTNTKSITLDSIYFQAGSRVQCAARAFNANGDAGLELSSPITVISREEGL
CQPRIAGTVGAEPFSAKIRYTGPDDPDYPNLIKLTVTMPHMDGMLPVISTRPLSNFELTL
SPDGTRAGNHRCSNLLDFNEIQTGHGFITDATKNPEIIGETAPYQYSVAMRSANSLRFYR
NLNLEACLWEFSSYYDMSELLNECGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELRLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINEEGRLVVNFKTE
ARFRGQFVMSHPGSSLSSIVMCADHPGLTFTLSLVRTEPTYNQPMQQWSFVSDFAVRDYS
GTYTVKLIPCIASPNGEFSIPPVCHPREPLTFDMDIRFQQVSDPVAAEFSLNTQMFLLSK
KEIWLSDGSMGFAEGTDVAFTEGSTIYGRVMVDPVQNLGDSFSCSIEKVFLCTGTDGYVP
KYNPTNKEYGCLADAPSLLYRFKILDKAQPETQAASFGDVHFDATLALDTPGGLSLAQQP
GSDGFALSSSPLFQVAAGREWFIHTIYTVRSRENAIRGIGKRSLEYHHGISSVLPNSGAM
TRNRRAVPDPEALDIGVENSRGTNIQHIALDRSDRLRVSQRQPWGRETYIERPLVEGSLG
KEPATDSILPVGSPTLLGIAGLILLLCLVVILVVVLLRCKRKEKKDPPYSTSSCSAYGNG
SNSRGTAGMRYSGDSSEV
NT seq
9417 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaaggacaagattttgtggaacccagacacttctgaagtgcctc
cttgttttgttttcattaggtctttgcttctgcacagtgcaagcagatccttctgattcg
gctttccattacaggcaccgatctggacctaacgctgaaaccatcttggtggccaccaat
gggattagagttccttttggacgctctgtttatttggatcctatcaatgaccttgtcact
gaagtgaaaccaggagatcgttgccacatcacagtactagacaatgacccactggcacaa
agacctggaatgctgactcccaagaaattcccatgtgagtttggagctaaggaagtgaaa
tacactcattttggctcacggagtccaagtaaggaccaggtgaagctacagctaaggtat
gactcccatacagacactgtggtcatccctttcatgctcgaggtagaggttgtcttccag
cagctggagatcttaactcgtaacatgcctcttgttgtggaaaagcttaacggtcaaagc
aaccccattgataaaaagggcctggagtttgcttttgaggatggtgtcacaaagtgcaag
gtggccacactggttggaacaggtggccttcccaggtatggcactctttcagacaactct
gttaatggacagatgattgactgtgatgagtttgtcaaaaaaggtataagataccagcat
actgccaccactaaatctcctaacagagattacataccaatgttagtggaagtacaagat
aatgatggtaatactattcagcaagagcacttccagattatggtccgaataaaagaaggt
gttgaaaacacacctccaaaagccagctttatagctatgatgatgatggaggtagatcag
tttgtaatgactgccataacatctgatatgctggcagctgaggatgtagaatcacttcct
gatgatttaatatttaacataacatctcccctaggccatcaacaaggatatattatcagc
acagataaccataatttgccaatcacttcgttttatcaaagagatataaaagatctaaaa
attgcctataagccaccctctgaagattcagatgcagagaggatttttcagattgaattt
gagatagttgatactgatggggctgtgtctgatacctttgcatttatgattgtcgtgaaa
ccaatgaacactttagccccagtagcgaccaagaacacgggccagttgctgtttgagggt
cagtcaaggcctctttctagttctcagaatcttgaaatcagtgatgaggataacctggaa
gatgtgaagattactgtaattgatggcttgaaacatggtgagatgacagtgttaggatct
cgcagaaaattctttacacctgctgatttagattctggcattgtgatataccaacatgat
ggaagtgatacttacagtgacaacatcatatttcgaatgacagatggaaaaaatgaagtg
gagtttctgtttcccattacaatcgcccctactgatgatgagcctcccatcattaatgct
aacactggtattgtgctgttcaagaatgaaatgatgcaaatttcaccgtttattttgagt
gctactgacatagactcagaggattcaactattaaatttatactggaggagccttattca
accattggtgaactgcttcttagacaagtggagccccctgcagatacttcttcttggaag
tttagtgaggcagatgaaatgtttgaacaggtggtgacagaatggtcccagcaggatatt
cttgatgggaaactgttttaccgccacaaaggtccacacagcaccaccactgtcactgac
cagtttgtcttcagagttcaggatgataatgaccccccaaaccaatcaggagaacacacg
ttcaccattaaaatccatccagtagatgatataccaccatcactttacccagacactact
ctgcacatgacagttaaagaatatgagttgacattttttagaaagaagtttcttcgctat
acagacctggactgtgatgaccgggatctcaagtatatcatcattaagcccccaaaagat
atagatgaaaacaatccagtgcctcttggagccattgtacttactgacagtcctgacacc
atcattactgaatttactcaagctcaggtaaatcaccataaaatagcatacaaaccccct
gaccaggaactgggtatcactcccaaagtggttcagttcacctttgttgttgaggacact
gcaggtaactcagctgatggcttgttcacaatatttttgcagccggttgacaataagcct
cctgtaatcacaaatactggttttactgtactggagcgaagtacttacataataactaaa
aatgaactgaatgcatctgatcaggacacagagaatgagaatattatctttaaagtgatt
caaattcccacgtatgggcagctacagtatttaggaattgatatgtctaatggagagaca
ttcattttagaagatattgaaagtggtcggctggcctatatccatggtggtgaagaatct
ctcagtgatgttatcaaaattgatgtcagtgatggctttcatgaagtgcccatcattatt
aaaattaatatcaagccagttgatgatgagagcccaactattatgctaccagcaggtctt
ttaggtgcttcaattgatgttcttgagaatggagctacagagatcaccagcaatgtcatc
cagggccaggatgaggacacagatgatttaatgctgacatttatagtggaggagcctcca
agactaggagagatcatggtgaatggtgttccagctgaacgatttactcagcaagacatt
atcaatggtgtggttgtctacgtccacacaagtggcgagattggaccaattaaggagcat
gactctttcaacctcaccatctcggacttgtcagacgagtgggtggtaggtcgtaacaaa
gttcaaggagttcgtgtacatgtcaccatccttcctattgacagcattgcccctgttgtt
agtgttggggcccagtttgtggtagtggagggagaaaagaatgttattacactagagcac
attggagctgaagatgttgacacagataatgatgatatcctctgcactattatagtccag
ccaacatctggctatgtggagaacatttctccagcccctgggtcagaaaagtcaagggca
ggcactgccatcaccgcctttaacatcaaagatgttagtctcagccatatctactatgta
cagagcattcataaaggtgtagagccagtggaagacaggtttactttccactgctctgat
ggcattaatttttcagagaggcactttttccctattgtcatcatccctgccaatgatgag
aagccagaaatatttatacgtgagtttgtagtcatggaaggcatgagcttagtcatagac
actccaattttgaatgctgcagatgcagatattccaggtgatgaattagagtttgagata
atcaagaatcccaaacatggcaacattgtccagcagttaagcaccgggagtacccctgta
gtgaaattcaccttggaacagatcaaagaggcctctaatattgtttatgaacatgatgac
tctgaaaccaaagaggatagttttgaaattagactcactgatgggaaacacactgttgaa
gagaaggttctgataatggttattcctgttgatgatgagaccccaagaatgacaattaat
gatggactggaggttgaaattggagaaaccaaagtgattagcaacagagtcctcaaagcc
acagatttggactctgaagacaaagagcttacttacattatgcgctatggtcctggccaa
ggctaccttcagagaattactaagcatggagatgttattggcaacataagcactggaatg
aatttcacacaagatgaaattgataaacagctcattcaatatgtccacactggtcaagag
ggcattcgtgatcttctaaagtttgatgtcactgatggtatcaaccctcttattgaccgc
tacttctatatcaacattggcagtattgatatggtcttccctgatgtcatcaacaaaggt
gtgaccctcaaagaaggaggcaaagtaaccctcaccacagaccttctcagcacaacagac
attaatagtcctgatgaataccttagttttaccatcactcgtgctcctagcaggggtcac
ctagaaagcactgaccatcctggtgtacccatatccaccttcacccagttgcaactggct
ggcaacaaaatctactacatacacacttctgatgatgaagtgaagatggatagctttgag
tttgaggttactgatggttacaatccagtattcaggactttccgggtgtctatcactgac
gttgacaacaagaagccagtcttgactattaacaaattgatggtggaagagggtgaaaca
aaactcatcacaccttttgagttgactgtggaagaccgtgacactccagacaatctacta
cgttttgtggttactcaggttccagtgcatggtcaactactgtacaatgggactcgggtc
atcacaactttcactaagcaagacctaaatgagaacctaattagttataagcatgatggc
actgaaactaatgaggacagcttctccttcactgttactgatggaactcactcagacttt
tacgttttcccggatacagtctatgagacacgtaagcctcagatgatgaccatccagatt
aacacagtggacaatggcatgcctcaaattgttgtcaacaaagctgcatcgacactcagg
gttcttcatactgggcatctcggatttttaattacaagcaaagctctgaaggctgaggac
agagatagcccaaacaaagttttgaagtactatgtttctgaggcccctctgcatggcttc
atcattaatattgctctgggcaatgacagcatcaagaccttcacacaagctgatattgac
gacatgaagatctgctatgtattacttgatgcatccaatgccacaagtgacattttctac
ttcacagtggaagacaatgggggcaataaattgaaggcgcagccatttcgcttgaactgg
gcctggatctctctggagaaggagtattacttggtggacgaggatgcaaagttcctggag
gtgacgctcaagcgtagaggatatttaggagagacatcgtttgtcagcattgccactaag
gatggcactgctgaaaaagacaaggactttcgtggaaaagcccagaaacagatccaattt
aatccaggccagactacagctacctggagagtcaagatcttcactgaccaggagtttgaa
acttcagaaacctttgagatccaactttctgaaccagtaatggcagttctagagtaccca
gataaagccactgtggagattgtggaccctggtgatgagtccactgtgttcatccctcaa
gctgaatacctaatagaggaggacattggagaactgctggttcctgtacgcagatctgga
gatgtaagccaggagcttatggtaatttgttacacacagcaaggcagtgccacagggacc
atccccagcacagtgctctcctactccgactacatcactcggcctgaggaccacagcagc
gtgctacgctttgacaaggatgaacgggagaagctgtgccgcatcatcatcattgatgac
tcgctgtatgaggaagaggagagctttaatgtgtcactgagcatgcctatgggaggtcag
gtgggagccagcttccccagtgccaaggtcatcatcctggcagacagcaatgatgaaccg
gctctttattttggagagacggagtacacagtggacgagagtgctggctacgtagaggtg
atagtatggaggacgggtactgacctctccaagacagctacggtgactgtgcgttctcgg
aagacagatcctgtttcagctgaagctggtttagattatgttggcatcagtcgcaacatg
gattttgctcccggcgtcacaatgcagacgttccgtgtaacaatcctggatgatttgggc
cgtccagagctggaagggccagagaaattcgagctggtgttgcgcatgcccatgaacgct
gtgctgggagagccgagcaagactgtcatcactatcaatgataccattactgaccttccc
agaatgcaatttaaagagacagagtataaggtggatgaatctgatgggcaggtgagggcc
atggtgtaccgcagtggtgacatcagccagaaatccactgtccgctgctatactcgccaa
ggatctgcccaggtcatgatggattacaatgagcgacccaacactgatgcgtccatcatc
accttcatgccaggtgagaatgagaagccatgtgtggtgactttgttggacgattccatt
cacgaggatgatgaggagttcagactagttctgggaacgccgaaaagcaagtcaaaatac
ggagctgcactgggggagcagaaggacactctggtcaccatcactgacaagaaagacaag
gctatcattagattctctgaggttaagtacagtgtacaggagcctcaggttcccggagag
atcgccgtggtgaagatccctgttgtccgtctgggtgacacctctaaagtctcggtggtg
agagtccacaccaaagatggctctgccacatcaggagaggactacaacccactgtctcaa
gatgtggagtttaaagaaggggagacggagcatgtggtggaggtccaggtcctgtatgat
ggacagagggaaatccgcgaggccttcactgtccacttgaagcctgatgaatacatggtg
gctgaaacacagatgagcaaagccattgtgtacattgaggagatggacagtgtagctgat
gttaccttcccagcagtgccccaggtggtgtccctgctcacatatgatgatacagctcgg
gcaaaggagcatccaaacccttcaacaggctaccctgtagtgtgtgtgacggcatgcaac
cccaaatactctgactttgacaagactggttctatctgtgctgtggagaacattaacgac
accctgactcagtaccgctggctcgttagtgcccccactgggccggatggagtcaccagt
cccatgcgtgaggtcgataccaacaccttcttcaccaataccaagtccatcacactggac
tccatctacttccaagcaggatcgcgtgtgcagtgtgctgcccgggcctttaatgctaat
ggagatgccgggctggagctcagttcacctatcacggtcatcagcagggaggagggtctt
tgccagcctcgcattgctggaaccgttggtgctgagccgttctcagcaaaaatccgttac
accggacccgatgaccctgactaccccaacctcatcaaactaactgttaccatgccacac
atggatggcatgctacctgtcatctccacacgtccactgtcaaacttcgagctgactctg
agtccagacggtacccgagctgggaaccaccgctgctccaacctgcttgacttcaacgag
atccagacaggccatggcttcatcacagatgccaccaagaacccagagatcattggtgag
acggcaccctaccagtacagtgtggccatgcgcagtgccaactctctacgattctaccgc
aacctgaacctagaggcctgcctatgggagttcagcagctactatgacatgtctgagcta
ctcaatgagtgtggaggatccattggaactgatggacaggtgctgaatttggtccagtcc
tatgtcactctgcgcgtgcctctcttcgtgtcctatgtgttccactctcctgtagcagtt
ggtggctggcagcattttgacctgcagtcagaactgcgtctcacctttgtgtatgatacc
gccatattgtggcaggatggcattgggagtccccccgaggctgaactgcaaggtgccatg
tatcctaccagtatgagaatcaatgaggagggtcgcttggttgtcaacttcaagactgag
gctcgattcaggggacaatttgtcatgtctcatccaggaagcagcctctcgtccatagtg
atgtgtgctgatcaccctggccttacattcactctgtctctggtccgaactgagcctaca
tacaaccaaccgatgcagcagtggagttttgtctctgactttgctgtaagagactactct
ggcacctatacagtgaagctgattccgtgcattgcttctcctaatggtgagtttagtatt
ccacccgtgtgccatccccgagagccactgacatttgacatggacatccgcttccagcag
gtgagtgacccagtggcagcagagttcagcctgaacacacagatgttcctcctgtctaag
aaagaaatctggctatctgacggctctatgggctttgcagaaggcactgatgttgctttc
actgaaggttctaccatttatggacgtgtgatggtggacccagtgcagaacttgggagat
tcattctcctgtagcatagagaaggttttcctctgtacgggcacagatggctatgtgcca
aaatataaccccaccaataaagaatatggctgcctggctgatgccccctcactgctctac
aggttcaagatcctggacaaagcccagcctgagacccaggctgcttcatttggagatgtg
cattttgatgctacactggcattagatactccaggaggcctttctcttgcccaacagcct
ggatcagatgggttcgcattgtcctcatccccccttttccaggttgcggctggtcgtgag
tggttcatccacactatatataccgtccgctccagagagaatgctatccgtggcattggt
aagagaagcctggagtaccatcatggcatttcatctgtccttccaaattctggtgctatg
acccggaaccggcgggctgtgcctgacccagaggccttggacattggtgtggagaacagc
cgtggcactaatatccagcacattgccctggaccgctctgaccggctcagagtgagccag
cggcagccttggggccgtgaaacttacatagagcgccccctagtagaggggagcctgggt
aaagaacctgccactgactccattctacctgttggcagccccacactgttgggaattgct
ggactaatcctcctattgtgtctagtggtaattctagtggttgtattactaaggtgtaag
aggaaagagaaaaaagatccgccatactctacttcttcttgctccgcctatggcaatggc
agcaatagcagagggactgcaggaatgagatacagtggggacagttctgaggtttag
DBGET
integrated database retrieval system
