Ictalurus furcatus (blue catfish): 128606076
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Entry
128606076 CDS
T09387
Name
(RefSeq) ATP-binding cassette sub-family E member 1-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128606076
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
128606076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_22
AAA
Fer4
AAA_15
RsgA_GTPase
AAA_29
Fer4_6
AAA_14
AAA_16
NACHT
SRP54
nSTAND3
Fer4_10
AAA_23
Fer4_21
TsaE
Fer4_2
AAA_5
Fer4_4
AAA_7
AAA_19
NPHP3_N
Fer4_16
Fer4_9
Fer4_7
Motif
Other DBs
NCBI-GeneID:
128606076
NCBI-ProteinID:
XP_053478052
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All DBs
Position
3:32021849..32032985
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AA seq
599 aa
AA seq
DB search
MSEKPIRIAIVNHDKCKPKKCKQECKKSCPVVRMGKLCIEVTTQSKIVWIAESLCIGCAI
CIKKCPFGALAIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDTPPDWQEILAYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPNTV
TGNVGSILSRKDDSKTAAVVCEQLDLTHLRDRKVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLKAAITIRSLITPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETAAEEDVKKMCRYQYPNMKKTMGDF
ELRIIEGEFTDSEIMVMLGENGTGKTTFIRLLAGRLKPDNEEQVPILNVSYKPQKISPKF
KGSVRAMLHEKIRDAYTHPQFVTDVMKPMQIDSIIDQDVQNLSGGELQRVALTLCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPS
QRTTANTPQMLLAGMNKFLSLLEITFRRDPNNFRPRINKLNSIKDVEQKRSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaccaatccgaattgccatcgtgaaccacgataaatgcaagccaaagaaa
tgcaagcaggagtgcaaaaagagctgcccggtggtccgaatgggcaaactgtgtatagag
gtcaccactcaaagcaaaatcgtatggatagctgaatcactctgtataggatgcgctatc
tgcattaagaaatgtccatttggtgctctggctatcgtcaacctgccgagcaacctggag
aaagagaccacgcaccgatactgtgccaactctttcaaactacaccggttaccaatcccc
agacctggagaggttttagggctggtcggtactaacggcattggaaaatcaacagcactt
aagatcctcgctggaaaacagaaacccaatctggggaaatatgatactcctcctgactgg
caggaaatcctggcttacttccgaggatctgaactgcagaactacttcacaaagatcctg
gaagacgatctgaaagccattgtgaagcctcagtacgtcgaccagatccccaacactgtc
acgggaaacgtaggctctattctgagcaggaaggatgactctaagacagcagctgtagtc
tgtgagcaactcgatctgactcatctcagggacaggaaggttgaggatctgtcaggagga
gagctacagcgtttcgcctgtgcggtggtgtgcatccagagagcagacattttcatgttt
gatgagccctccagttacctggacgtgaagcagcgtttgaaagccgccatcaccattcgc
tctcttatcacaccagacagatacataattgttgtggagcatgatctgagtgttctggac
tacctgtctgacttcatctgctgtctgtatggagtgcccagcgcttacggcgtcgttacc
atgcccttcagtgttcgagaaggcatcaacattttcctggacggatatgtgccaaccgag
aacctccgtttccgtgatgcttcactggttttcaaagtagctgagacagccgccgaagag
gatgtgaagaagatgtgtcgctaccagtaccccaatatgaagaagaccatgggtgacttc
gagctgcggatcatcgagggcgagttcaccgactctgagatcatggtcatgcttggtgaa
aacggaactggcaaaactacattcatcaggctgctcgctggtcgattaaaaccagataac
gaagagcaggtcccgatcctcaacgtcagctacaaacctcaaaagatcagccccaaattc
aagggtagcgtgcgtgccatgctgcacgagaagatcagggatgcgtacacacaccctcag
ttcgtcaccgacgtcatgaaacctatgcagattgacagcatcatcgatcaggatgttcag
aacttgtctggaggagagctgcagagagtagcgctcactctgtgtctgggtaaacctgca
gacgtctacctgatagatgagccctcggcatacctggactcagaacagaggctgatggct
gccagagttatcaaacgattcatcctccatgcaaagaagacagcttttgtagtcgagcat
gacttcatcatggccacctacctggctgatcgcgttatcgtgttcgacggagttccgtca
cagaggacgaccgccaacacgccacagatgctccttgctggcatgaacaagttcctttca
ctgctggagattacgttcaggagagaccccaacaacttcaggccaagaatcaacaagctc
aattccattaaggatgtcgaacagaagagaagtggcaactatttcttcctcgacgattag
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