Ictalurus furcatus (blue catfish): 128606253
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Entry
128606253 CDS
T09387
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128606253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128606253
03036 Chromosome and associated proteins [BR:
ifu03036
]
128606253
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128606253
Coactivators
SAGA/TFTC/STAGA complex
128606253
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128606253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
128606253
NCBI-ProteinID:
XP_053478268
LinkDB
All DBs
Position
4:complement(31264685..31361810)
Genome browser
AA seq
963 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGRSGNKAGGAKQHIGKALSSRDGATSP
AVSISAAGRRATASGTVETPRHYGTRKKRGGARGSAASRSVNGAATSSVISSNSPSSAGA
AVSMAMARANSSTYTVSSASRSVALDKGTPKIALHRLPSHIVASIAQGRNGTSVSALIQQ
GRVNHGKNAESAQSGEDKTKADVQQVQPGSVNSVPSAVCIAVTTQPQSQPQPQTQTQPQS
QPQTQTQSQTQSQTQTQTQSQTQTQSQPQTQTQSQPQTQTQSQTQTQTQSQPQTQTQTRS
QPQTQTQSQPQTQTQAQTQTQPITQPISQSQPQTISQPQSQPQSQPRSQPQTQLQSPSQL
QPQTQSQLQHQSTLQPQTQSQPQTQSQAQPQLQPQPRPAAPAQRITAPQLIVRPPQQQAT
IQLPPGFTIPAGMVLVRTELGQLMMVPQQALAQAQAQSALSPRPAAPTTTATFRVTTPQR
APLAVTTPQQHPAALAPQGPTLVPPTAAGPAPGATVISQEMQENVKKCKNFLATLIKLAS
HNSPSPETSRNVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSL
LNSQQSLTQPPQPKTTASPTVAVAGAVTMGNAPRQPNSTVTPPQNIKRAGTVGGQVRMPV
VITQTVRPAGAVGKSPVVQAGKSPSAVSVQLSGAQKNKVNDPGGGSFRDDDDINDVASMA
GVNLSEESARILATNSELVGTHIRSCKDEAFLPTGLLHRRILETAKKFGVTEVPVEAVNF
IAHATQTRLRTVLEKVSFIAQHRMDSSKDEEWYEQSSDVRSQLKFFEHLERLEKQRKDEQ
EREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRRVD
SPGATSGTEVSGSSVGSPASSLSSSRQFHRQRITRVNLRDFIFYLEQERETSRSLLLYRA
LLK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagatatgctgttctccgaggtggacgagaaggcg
gtgagcgacctggtgggctcgctggagtcgcagctcgtcggccggagcggaaacaaggcc
ggcggcgccaagcagcacatagggaaagcgttaagttctcgggatggagcaacttctccc
gcggttagcattagcgccgccggccgcagagcaacagcctcgggcaccgtggagacgccg
cggcattacggtacgcggaagaagcgcggcggcgcgcggggcagcgctgcgtcgcggagc
gtgaacggtgctgcgacctcctccgtcatcagcagcaactcgccatccagcgctggggcc
gcggtttccatggcgatggcgcgcgccaactcctccacgtacaccgtgtccagcgcgagc
aggtccgttgcgctcgataaagggactcccaagatcgcgctgcaccgactcccgagtcac
atcgtggcgagcatcgctcagggcaggaacggcacgagtgtgtcggcgctcatccagcag
gggcgcgtgaaccacggcaagaacgcagagagcgcacagagtggggaggacaagaccaaa
gcagatgtgcagcaggttcagcctgggagtgtgaactcggtcccgagtgctgtgtgcatt
gcagtgacgactcagcctcagtcccaacctcagccccagactcaaacccagcctcagtcc
caacctcaaacccaaactcagtcccaaactcagtcccaaacccaaacccaaactcagtcc
caaacccaaactcagtcccaacctcaaacccaaactcagtcccaacctcaaacccaaact
cagtcccaaacccaaacccaaactcagtcgcaacctcaaacacaaacccaaactcggtcg
caacctcaaacccaaactcagtcccaacctcaaactcaaacccaagctcaaacccaaact
cagcccataacccaacccatatcccaatctcaacctcaaaccatatcccaacctcagtcc
cagcctcaatcccaaccccgatcccaacctcaaactcagcttcaatctccatcccaactc
cagcctcaaacgcaatcccagctgcagcatcaatccacacttcaacctcaaacacaatcc
caacctcaaacccagtcccaagctcaacctcagctccaacctcagcctcgacctgcagct
ccagcgcagaggatcacggctccgcagctgatcgtcagaccgccacaacagcaggcgacc
atccagcttcctccaggatttaccatcccggcaggcatggtgttggtgcggacggagctg
ggtcagttgatgatggttccacagcaagcactggctcaagcgcaggcccaaagtgccctc
tcaccccgacccgctgccccgaccactacagccaccttcagagtcaccaccccacagagg
gcgcctttggcagtgacaacgccccagcagcaccctgcagctctggccccccaggggccc
accctggttccacccaccgcagctggccctgcccccggagcaaccgtcatctcccaggaa
atgcaagagaatgtgaaaaagtgtaagaacttcctggcaacgttgatcaaactcgcatcc
cataattccccctccccggagacgtcacggaacgtgaaagccctggtgcaggaccttctg
gatgccaaaatcgaaccggaagaattcaccagccggctgcagacggagctgaagtcatca
ccacagccttacctggtgccttttctcaagaaaagcctgccagcgttgcgtttgtccctg
ttgaacagtcagcagtcgctcactcagcccccacagcctaagaccaccgcgtctccaacg
gtagccgtcgccggggctgttacaatgggtaacgccccccggcaacctaacagcactgtt
acaccgccacagaatattaagagggcagggacggtaggagggcaggtccggatgcctgtg
gtcatcacgcagacagtgcggccggcgggtgctgtagggaagagtccggtggtgcaggcg
gggaaaagcccctcggcggtcagcgtgcagctctcgggggctcagaagaataaagtgaac
gatcccgggggaggctccttcagggacgatgatgacatcaacgatgttgcgtctatggcc
ggggtgaacttgagcgaggagagcgctcgtatcttagcaaccaactctgagctggtgggc
acacatatccgctcgtgtaaagacgaggccttcctgcccacgggtctactgcatcggcgc
atactggagacggctaagaagttcggggtgacggaggttcctgtggaggcggtaaacttc
atcgctcatgccacacagacacggctgaggacggtgctggagaaagtgtctttcatcgct
cagcacaggatggactccagcaaggacgaggagtggtacgagcagtcgtcagacgtccgc
tctcagctcaagttcttcgagcatttagagcggctggagaaacagaggaaagacgagcag
gagagagagattcttctcaaagcggccaaaagtcgctcgaggcaggaggacccagagcag
gctcgtttgaagcagaaggcaaaagagatgcagcagcaggaactggcccagatgaggcag
agggacgctaacctcacggctctcgccgccatcggaccacgcaaaaaacgcagagtggac
tcgcctggagcgacatcgggcactgaggtgtcggggagctccgtgggttctccagcctca
tcgttgtcgtcctcgcgccagttccatcggcagcgaatcacgcgcgtgaacctcagggac
ttcatattctacctggagcaggagcgagagacgagccgatcgctcctgctctaccgtgct
ctgctgaagtag
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