KEGG   Ictalurus furcatus (blue catfish): 128606776
Entry
128606776         CDS       T09387                                 
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
  KO
K23195  transcriptional repressor CTCF
Organism
ifu  Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ifu03000]
    128606776 (ctcf)
   03036 Chromosome and associated proteins [BR:ifu03036]
    128606776 (ctcf)
Transcription factors [BR:ifu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    128606776 (ctcf)
Chromosome and associated proteins [BR:ifu03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    128606776 (ctcf)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_16 zf-H2C2_5 zf-C2H2_jaz zf-C2H2_REST Zf-C2H2_ZNF451_C zf-C2H2_ZN142 zf-met zf-C2H2_7th_ZNF462 Zf-C2H2_ZNF451 zf-C2HE zf-C2H2_6 zf-C2H2_15
Other DBs
NCBI-GeneID: 128606776
NCBI-ProteinID: XP_053479147
LinkDB
Position
4:15327305..15335522
AA seq 864 aa
MRSNRLGPPFCAEPTLQTRERIKTSEEEARSCTSPRTKGRADRGPCVGFNERINEQKQVV
PMEGGQTEAVVDETGDAFKAKDCKTYQRRREDEEVEAELLQAAGLEAVEQPVAEGEVTGA
VVDAQQQLVEGVVSVNSGIEMMVMDSLDPALLQMKTEVMEGTMAAGVSVAGAAHEATVTT
VDDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTATTVEELQGTLVDATAMPKDGEP
VICHTLPLPEGFQVVKVGANGEVETVEQDELHGHEEQSLQQQEEEEIPEPQNDDPTWAKD
PDYTPPVKKTKKTKKSKLRYNTEGEKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPK
PTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHL
NTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSH
TGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN
VAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCEAVFHERYALIQHQKSHKNEK
RFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCEKTFRQKQLLDMHFRRYHDPNFVPT
SFVCTKCSKTFTRRNTMARHAENCSGVEGGDGENGAPTKRGRGGRKRKMRSRKDDDDSDD
HGEPDLDDIDEEEEEEDALDDMEMEVEQAPPTVPIPAPAEPPVKRKRGRPPKNPPKASPA
KNTAIAPTATAIIQVEDEGTGAIENIIVKKEQDGMDSSLAASSEPVVEEVEATEGGVEAE
QLSVPEAAPNGDLTPEMILSMMDR
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgcgcagcaaccgcctcgggccgccattttgtgcggagcctactctgcaaacgcgggag
aggattaaaaccagcgaagaggaagcacgcagttgtacttcgcctcgtactaaaggaaga
gcggatcgcggaccttgtgtcggattcaacgagaggataaacgagcaaaagcaggtagta
cccatggaagggggacagaccgaagctgtagtggatgagacaggggacgctttcaaagcc
aaggactgtaagacgtaccaacggcggcgcgaggacgaagaggtcgaagccgagctgttg
caggccgctggtctggaggcggtggagcagcccgtagccgagggggaggtgaccggtgcc
gtggttgacgcacagcagcagctggttgaaggcgtggttagcgtaaacagcggcatagaa
atgatggtgatggactcgctggatccagccctgctacagatgaagacggaagtgatggaa
ggtaccatggctgctggtgtgagtgtagctggggcagctcacgaggccacagtcaccact
gtggatgacacacagatcatcaccctgcaggtggtcaatatggaggaacaacaactgggc
ctgggtgaactgcaactagtgcaggtgcctgtttcagctgtgcccgtcactgccaccacc
gtggaagagctgcagggaaccctggtggatgctactgccatgcccaaagatggagagcct
gtcatctgtcacacgctgccactcccagagggcttccaggtcgtgaaagtaggtgccaat
ggagaagtggagacggtggagcaggatgagctccacggccatgaggagcagtctctgcag
cagcaagaagaggaggagattcctgaaccccagaatgatgatcccacttgggccaaggat
cctgactacacacctcctgtcaaaaagacaaaaaagacaaagaaaagcaagctgcgctac
aacacagagggagagaaagacatggacgtgtctgtttacgactttgaggaggagcagcaa
gaaggcctgctctcagaagttaatgcagagaaggtcgtgggcaacatgaagcccccaaag
ccaaccaaaatcaaaaagaagggtgtgaagaagacattccagtgcgagttgtgtagctac
acctgcccgagacgctccaacctcgaccgtcacatgaagagccacacggatgagcggccg
cacaaatgtcacttgtgtggacgtgccttcaggaccgtcaccctgctgaggaaccatctc
aacacacacacaggcaccagaccccacaaatgtaccgattgtgacatggcctttgtgact
agcggtgagcttgtgcgacatcgtcgctataagcacacccatgagaagcccttcaaatgt
tccatgtgtgactatgctagtgtggaggtcagcaagctgaagagacacattcgctctcat
acaggagagcgtccattccaatgcagcctgtgcagctatgccagcagagacacctacaag
ctgaagagacacatgagaacccactcaggcgagaagccgtatgagtgctacatctgtcat
gcacgtttcacccagagtggcactatgaagatgcatatcctgcagaagcataccgagaac
gtggccaagttccactgcccccactgtgacactgtcatcgcccgcaagagtgacttaggt
gtacatctgcgcaagcagcattcctatattgagcaaggcaggaagtgccgttactgtgag
gctgtgtttcatgagcgctacgctctcatccagcaccagaagtcccacaagaacgagaaa
cgcttcaagtgtgaccagtgtgactatgcctgccgacaggagcgtcacatggtaatgcac
aagcgcacccacactggggaaaagccatatgcctgcagccactgtgagaaaactttcaga
cagaaacaacttctggacatgcattttcgtcgctaccatgaccccaactttgtgcccact
tcctttgtgtgcaccaagtgcagcaagacctttacacgcaggaacaccatggccaggcat
gctgagaactgttctggagtagaaggtggtgatggagagaacggtgctccaaccaaaaga
ggccgtggtggcagaaagaggaagatgcgctccaggaaggatgatgatgacagtgatgat
catggagagcctgatttagatgacattgatgaggaagaggaggaggaagatgctcttgat
gatatggagatggaggttgagcaagctccaccaactgtccctatccctgcccctgctgag
ccgcctgtcaagaggaaacgtggtcgacctcccaagaatcctcccaaagcttctcctgct
aagaacacggccatagcacctactgcgactgccattatccaggtggaggatgagggcacg
ggagccattgagaacatcatcgtgaagaaggagcaggacggcatggattcttctttggca
gcgtcatcggagcctgtggtggaggaggttgaagccacagagggaggagtggaggcagag
cagctctccgtccctgaggccgcacccaatggagacctcacccctgagatgatcctcagc
atgatggaccggtga

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