Ictalurus furcatus (blue catfish): 128606776
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Entry
128606776 CDS
T09387
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128606776 (ctcf)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128606776 (ctcf)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128606776 (ctcf)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128606776 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-met
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
128606776
NCBI-ProteinID:
XP_053479147
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Position
4:15327305..15335522
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AA seq
864 aa
AA seq
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MRSNRLGPPFCAEPTLQTRERIKTSEEEARSCTSPRTKGRADRGPCVGFNERINEQKQVV
PMEGGQTEAVVDETGDAFKAKDCKTYQRRREDEEVEAELLQAAGLEAVEQPVAEGEVTGA
VVDAQQQLVEGVVSVNSGIEMMVMDSLDPALLQMKTEVMEGTMAAGVSVAGAAHEATVTT
VDDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTATTVEELQGTLVDATAMPKDGEP
VICHTLPLPEGFQVVKVGANGEVETVEQDELHGHEEQSLQQQEEEEIPEPQNDDPTWAKD
PDYTPPVKKTKKTKKSKLRYNTEGEKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPK
PTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHL
NTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSH
TGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN
VAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCEAVFHERYALIQHQKSHKNEK
RFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCEKTFRQKQLLDMHFRRYHDPNFVPT
SFVCTKCSKTFTRRNTMARHAENCSGVEGGDGENGAPTKRGRGGRKRKMRSRKDDDDSDD
HGEPDLDDIDEEEEEEDALDDMEMEVEQAPPTVPIPAPAEPPVKRKRGRPPKNPPKASPA
KNTAIAPTATAIIQVEDEGTGAIENIIVKKEQDGMDSSLAASSEPVVEEVEATEGGVEAE
QLSVPEAAPNGDLTPEMILSMMDR
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcaaccgcctcgggccgccattttgtgcggagcctactctgcaaacgcgggag
aggattaaaaccagcgaagaggaagcacgcagttgtacttcgcctcgtactaaaggaaga
gcggatcgcggaccttgtgtcggattcaacgagaggataaacgagcaaaagcaggtagta
cccatggaagggggacagaccgaagctgtagtggatgagacaggggacgctttcaaagcc
aaggactgtaagacgtaccaacggcggcgcgaggacgaagaggtcgaagccgagctgttg
caggccgctggtctggaggcggtggagcagcccgtagccgagggggaggtgaccggtgcc
gtggttgacgcacagcagcagctggttgaaggcgtggttagcgtaaacagcggcatagaa
atgatggtgatggactcgctggatccagccctgctacagatgaagacggaagtgatggaa
ggtaccatggctgctggtgtgagtgtagctggggcagctcacgaggccacagtcaccact
gtggatgacacacagatcatcaccctgcaggtggtcaatatggaggaacaacaactgggc
ctgggtgaactgcaactagtgcaggtgcctgtttcagctgtgcccgtcactgccaccacc
gtggaagagctgcagggaaccctggtggatgctactgccatgcccaaagatggagagcct
gtcatctgtcacacgctgccactcccagagggcttccaggtcgtgaaagtaggtgccaat
ggagaagtggagacggtggagcaggatgagctccacggccatgaggagcagtctctgcag
cagcaagaagaggaggagattcctgaaccccagaatgatgatcccacttgggccaaggat
cctgactacacacctcctgtcaaaaagacaaaaaagacaaagaaaagcaagctgcgctac
aacacagagggagagaaagacatggacgtgtctgtttacgactttgaggaggagcagcaa
gaaggcctgctctcagaagttaatgcagagaaggtcgtgggcaacatgaagcccccaaag
ccaaccaaaatcaaaaagaagggtgtgaagaagacattccagtgcgagttgtgtagctac
acctgcccgagacgctccaacctcgaccgtcacatgaagagccacacggatgagcggccg
cacaaatgtcacttgtgtggacgtgccttcaggaccgtcaccctgctgaggaaccatctc
aacacacacacaggcaccagaccccacaaatgtaccgattgtgacatggcctttgtgact
agcggtgagcttgtgcgacatcgtcgctataagcacacccatgagaagcccttcaaatgt
tccatgtgtgactatgctagtgtggaggtcagcaagctgaagagacacattcgctctcat
acaggagagcgtccattccaatgcagcctgtgcagctatgccagcagagacacctacaag
ctgaagagacacatgagaacccactcaggcgagaagccgtatgagtgctacatctgtcat
gcacgtttcacccagagtggcactatgaagatgcatatcctgcagaagcataccgagaac
gtggccaagttccactgcccccactgtgacactgtcatcgcccgcaagagtgacttaggt
gtacatctgcgcaagcagcattcctatattgagcaaggcaggaagtgccgttactgtgag
gctgtgtttcatgagcgctacgctctcatccagcaccagaagtcccacaagaacgagaaa
cgcttcaagtgtgaccagtgtgactatgcctgccgacaggagcgtcacatggtaatgcac
aagcgcacccacactggggaaaagccatatgcctgcagccactgtgagaaaactttcaga
cagaaacaacttctggacatgcattttcgtcgctaccatgaccccaactttgtgcccact
tcctttgtgtgcaccaagtgcagcaagacctttacacgcaggaacaccatggccaggcat
gctgagaactgttctggagtagaaggtggtgatggagagaacggtgctccaaccaaaaga
ggccgtggtggcagaaagaggaagatgcgctccaggaaggatgatgatgacagtgatgat
catggagagcctgatttagatgacattgatgaggaagaggaggaggaagatgctcttgat
gatatggagatggaggttgagcaagctccaccaactgtccctatccctgcccctgctgag
ccgcctgtcaagaggaaacgtggtcgacctcccaagaatcctcccaaagcttctcctgct
aagaacacggccatagcacctactgcgactgccattatccaggtggaggatgagggcacg
ggagccattgagaacatcatcgtgaagaaggagcaggacggcatggattcttctttggca
gcgtcatcggagcctgtggtggaggaggttgaagccacagagggaggagtggaggcagag
cagctctccgtccctgaggccgcacccaatggagacctcacccctgagatgatcctcagc
atgatggaccggtga
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