Ictalurus furcatus (blue catfish): 128606857
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Entry
128606857 CDS
T09387
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128606857 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128606857 (trip12)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128606857 (trip12)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
HECT type E3
128606857 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
Motif
Other DBs
NCBI-GeneID:
128606857
NCBI-ProteinID:
XP_053479325
LinkDB
All DBs
Position
4:22811313..22885646
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AA seq
2072 aa
AA seq
DB search
MSIRINHTAGGSLRRSQRNTLATRLQSEQTKQKTNSPPESKRSYTKASKAPPTPAAGSSR
GHAPRRNSLSLSSLSHSAPDPDSEAAGSSGQHEQREVVNNRALKRSSAPDHNNTSYSPSP
AKRPKAPPLESSEQSEPADPTADSAPELPSTARSKKRRLASEHPTSRTLNRKSGTCPATS
ASHKRKKADTPFCSSSSSSFSSSSLFLSGSSSEQASRSSKPSKLASKSAASAKSVTDSAS
SSSASSSSFTSSSSSSSSVVVAGASGCAPPSQGARLKQGKDQSKSRRSRSASSPSPRRSS
RDKEHSKSSTAASKFDWTSRFSPRVNLPKPRLALPGSSKPETPSGSSKPGPSGLQAKLAS
LRKSNKKRSESPPAELPSFRRSTRQKTTGSCASTSRRGSGLGKRGAAETRRQDKMAENDN
NQDGANSSRTEETPQGASASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFG
PRMSQLFHRTIGTGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVK
SVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVA
EQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHF
VADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVT
PPVLSSGMFIMVVRMFSLMCSNCPNLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVPR
SPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAHTTEAAVWQWRDDRGLWHPYNRID
SRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLINPNTGHVE
VRGEDARAELMREEAELARCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFSDSEL
LKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMADILMQKLPDVFSVYFRREGVMHQVKNL
AESESFLPSPPKACTSGITAVTTTITTATTPAASSVTPDLGSPSFHNNMEDSLDLSPQGR
LSDVLKRKRLPRRVPRRPKYSPPRDDDKVDNQAKSPTTTASPKSSFLASLNPKTWGKLGA
QNNSTNSEPSRTAGVSGLARTANKDTVSNNRDKIKAWIKEQASKFVERYFSSENVDGSNP
ALNVLQRLCTATEQLSLQVDGGVECLVEICSIVSESDVSSFEIQHSGLVKQLLLYLTSKS
ERDVVSRDERIKRFLHIFYGSPVPGQEPLFRLEPTENGPLLALVHKMNSCLSQMEQFPVK
VHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIER
YLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIADHLLPYNMTVY
QAVRQFSLQPEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGCKDSVGGKRGRAQ
TAPTKTSPRNAKKQDELWHDGVCPIVSNPLESYLISDPPEGITFDDPSLEVILLLRVLHS
ISRYWFYLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPPWLTELGKTCPF
FFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLK
QAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANP
KGSQEGTKYMFSSRGLFAVPFGRSTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGL
PFYKWMLRNESSISSHDLVNIDPGVATSIQHLEDIIRQKKRLELDKSYTRETLQQALESL
NMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNLEEYLRLVVYWTLNEGVSRQFES
FREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLF
EVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCV
NYLKLPDYSSIEIMREKLLMAAREGQQSFHLS
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaggattaatcacactgcaggggggtcactgcgccgatcacagaggaacaca
ctcgccaccaggttgcagtcagaacaaaccaaacaaaaaacaaattcccctcctgaaagt
aaaagatcatatactaaagcctccaaagccccgcccacgcctgcagctggctcctcacgt
ggccacgcccctcgaagaaacagtctttctctctcttcactaagtcactctgcacctgac
ccggattcggaggcagcaggaagctctggccaacacgagcagcgcgaagtcgtcaacaac
cgtgccctcaaacgtagctctgcacctgatcacaacaacacctcctattcacccagcccg
gccaagcggcccaaagcgccgcccctcgagagctctgagcagtcggaacctgctgaccct
actgctgactccgcccccgagctcccatccacagccaggtctaaaaaacgtcgtttggca
tctgaacatccgactagcaggacactaaacaggaagagcggcacgtgccctgccaccagc
gcctcccacaaacgcaaaaaggcagacaccccattttgctcttcttcttcctcctcgttc
tcttcctcttccttgtttttatccggctcgagcagcgagcaggccagccgctcatccaaa
ccctccaaactggcgtccaaatcggccgcctcggccaaatctgtgaccgattccgcctct
tcctcctctgcttcttcttcctctttcacatcctcttcctcctcctcttcttctgtggtg
gtcgcgggcgccagcggctgtgccccgccctcgcagggcgcccggctcaagcagggtaaa
gatcagagtaagtcgcggcgctcccgctccgcctcttcaccttctcctcgccgcagcagt
cgcgataaagagcacagcaaatccagcacagctgcctctaaattcgattggacgagccgc
ttcagtcccagagtgaacttgccgaagcccagactcgccctgcccggatcctccaaaccc
gaaacaccgtcagggtccagcaaacccggcccgagcggactgcaggccaaactcgccagt
ctgagaaagtccaataagaagcgaagtgagtctccccctgcagaactccccagctttagg
aggagcacacgacaaaagaccacgggctcctgcgccagcaccagtcggcgaggttcaggt
ttagggaagcgtggtgcagctgaaactcgccgacaggacaaaatggccgaaaacgacaac
aatcaggatggagccaattcatcacgcacagaggagacaccacagggagcttcagcctcc
agttcagtagctggtgctgttgggatgaccacttccggagagagcgaatcggatgactca
gaaatgggccgattgcaagctctactggaggcacgtggtctgccccctcaccttttcgga
cctcgcatgtcccaactgttccatcgtaccatcggcactggagctagttcgaaggctcag
cagctgctgcagggtctgcaggcgacgggggacgagtctcagcagctacaggcagcgata
gaaatgtgccagctgttggtgatgggcaacgaggagacactgggaggatttcctgtgaag
agtgttgtacccgctttgataacgctgttacaaatggagcataactttgatattatgaat
catgcatctcgtgctctaacctacatgatggaggcactgccacgctcttctgcagtagtt
gtagacgccattcctgtcttcctggaaaagcttcaggtgatccagtttatcgatgtagcc
gaacaagctctcactgcgctggagatgctctcacggagacacagcaaggccatcctgcag
gccggcggcttggccgactgtttgctgtatctggagtttttcagtattaatgctcagagg
aacgcgttagccattgccgctaactgctgccagagcatcacgcccgacgagtttcacttt
gtggccgactcgctgcctctactcactcagagacttactcaccaggataaaaaatcagtg
gagagcacgtgtctctgtttcgcccggctggtagacaactttcagcatgaagagaatttg
ttgcagcaggtggcttcacgcgatctgcttaccaacatccagcagcttctggtggtgacg
ccgccggtgctgagttcaggcatgttcatcatggtggtgcgcatgttctccctcatgtgc
tccaactgccccaaccttgctgtgcagctgatgaagcagaatatcgcagagacactgcgt
ttcctgctttgtggagcgtctaatggaagttgtcaggagcaaatcgaccttgttcccaga
agcccccaggaactctatgagctcacttctcttatctgtgagctgatgccatgcctcccc
agagagggcatttttgctgtagatgccatgttgaagaagggtagcgcacacactacagag
gccgcagtgtggcagtggagggatgaccgaggcctgtggcatccgtacaaccgcatagac
agtcgtatcattgagacggcccatcagaacggcgaggacgagatcagcctttcaacactc
ggccgagtttacaccattgacttcaactctatgcagcagatcaatgaggacacaggaacg
gcacggggaattcagaggaaacccaaccccctcatcaaccccaatactggccatgtggag
gtgcgtggtgaggatgcgcgtgctgagctgatgcgggaagaggcggagctagcacgctgc
tttattaagactctgtttggcgtgctgtatgaggtgtacagctcctcagccggccccgcc
gtcagacacaagtgcctcagagccatcctgcgcatcatatacttctccgactccgagctg
ctcaaggacgtgctgcgcaaccatgccgtctccagtcacatagcctccatgctgtccagt
caggacctgaagattgtggtcggctctctgcagatggctgacatcctcatgcagaagcta
cctgatgtgttcagtgtgtatttcaggagagaaggtgtgatgcaccaggtgaagaacctg
gctgagagcgagtcgttcctccccagtccgcccaaggcgtgcacgagcggcatcaccgcg
gtaaccaccactatcaccacggccaccacacccgccgcctccagcgtcacgccagatttg
ggctcaccgagtttccataacaacatggaggactcgctggacctcagcccacagggtcgt
ctgagtgatgttctgaagaggaagcgcctccctcgcagagtaccacgtcgtcccaaatat
tctccacccagagatgatgacaaagtggacaatcaggctaagagtcccactaccactgcg
tctcccaaatcatccttcctggcgagtcttaaccccaaaacctggggaaaacttggtgct
cagaacaatagcactaactctgagccgtctcgcacagccggagtcagcggccttgcacgc
acagctaacaaagacacggtctctaataacagggataagattaaggcatggataaaggag
caggccagtaagtttgtggaacgatacttcagttcagagaatgtggacggcagcaaccca
gcactgaacgttctgcagagactgtgtactgctacagagcagctcagcctgcaggtggat
ggcggcgtggagtgtttagtggagatctgtagcatcgtgtccgagtcggacgtgtcctcg
ttcgagattcagcacagtggcctggtgaagcagctgctgctctatttaacctccaaaagt
gagagagacgtcgtcagcagggacgagaggatcaaaagattcctgcacattttctacggc
agtcctgttccagggcaggagccactgttccggttggagccaacagagaacgggccactg
ttggcacttgtgcacaaaatgaacagttgcctgagtcagatggagcagtttcctgttaaa
gtgcatgactttcccagtggtaatggtaacggcagcagaggttctcaagcactgaaattc
ttcaacacacaccagctgaagtgccaactgcagagacacccagactgtaccaacgtgaag
cagtggaagggagggcctgttaaaatcgaccctcttgcactagtacaggctattgagaga
taccttgtcgttagaggatatggccgaatcagagaggaggacgaggacagcgacgatgac
ggatcagacgatgaaattgatgagtcacttgcggctcagttcctgaattcgggcagcgtg
cgccaccggttgcagttctacatcgctgatcacctgctgccctacaacatgaccgtgtac
caggcggtgcgtcagttcagcctgcagccggaggaggagcgtgagagcactgacgatgag
gccaaccctctcggtcgtgccggcatctggaccaaaacacacacgatatggtataagccg
gtcagagaggatgaggatggctgtaaggactccgtaggagggaaaaggggtcgagcacaa
acggctcccactaaaacttcaccacgtaacgctaagaaacaggacgagctgtggcacgat
ggtgtgtgtccaattgtgagtaacccgttggagtcgtacctcatatctgaccctccagag
ggcattacgttcgacgacccttcactggaggtcattctgctgttgagggttctgcactcc
atcagcagatactggttctacctctacgataatgctgtgtgtaaggagatcattcccact
agtgagttcatcaacagtaaactgaccgcaaaagcaaacagacagctgcaggatccgctt
gtgatcatgactggaaacatcccaccctggctcactgagctgggcaagacctgtccgttc
tttttcccgtttgacacgaggcagatgttgttctacgtcactgcgtttgatcgtgaccgc
gccatgcagcgtctacttgacaccaaccccgagatcaaccagtcagattcgcaggacagc
cgcgtagcaccccgcctcgacaggaagaagcgaacgataaacagagatgagctgttaaag
caagcggagtcggtgatgcaggatctgggaagttccagagccatgctggagattcagtat
gaaaacgaggtggggacgggtcttggtccaaccttggagttctacgctcttgtgtctcag
gagctgcagagagccgatctgggtttatggcggggagaggaggtcacccttgccaaccct
aaagggagtcaggaaggcaccaagtacatgttcagctctcggggcctctttgctgtccct
tttggtcgcagcaccaagccagctcacatcgccaagatcaagatgaaattccgctttctg
ggaaaactcatggctaaagccatcatggacttcagactgctggatctgcccctgggcctg
cccttttacaagtggatgttgagaaatgagtcgtcaataagctctcacgatttggtgaac
atcgaccccggtgtggccacatccatccagcacctggaggacatcattaggcagaagaag
agactagagctggacaaatcctacacaagggagacactacagcaggctctggagagttta
aatatgaatggctgttcagtggaggatttagggctggacttcacactgccagggttcccg
aacatcgagctgaagaagggaggcaaagacgtcccagtcaccatacacaacctggaggag
tacctaaggttggtggtgtactggactttaaatgagggtgtgtcccggcagttcgagtca
tttagggaagggtttgagtccgttttccccctccaccacctacagtacttctacccagaa
gagctggaccagttgctgtgtggcagcaaatcagagacgtgggacgtcaaaacgctgatg
gaatgctgcagaccggaccacgggtatacacacgacagtcgggcggtgcgattcctcttt
gaggtgttgagtagttttgacgcagagcagcagagactcttcttgcagtttgtgaccggg
agcccgagactgccagtaggaggtttccggagtttgaatcctcctttgacaattgtgcgc
aagacgtttgagtcaacggagaacccagacgacttcctgccatcggtgatgacgtgtgta
aactacctgaagcttccggattattccagcatcgagatcatgagggaaaaactgttaatg
gcggcacgggagggccagcagtcttttcacctgtcctga
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integrated database retrieval system
