Ictalurus furcatus (blue catfish): 128606875
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Entry
128606875 CDS
T09387
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04517
IgSF CAM signaling
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128606875
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128606875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128606875
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128606875
Intermediate filaments
Intermediate filament-binding proteins
128606875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH
PH_9
CAMSAP_CH
TMP_3
Meis_PKNOX_N
Snapin_Pallidin
SLATT_6
Motif
Other DBs
NCBI-GeneID:
128606875
NCBI-ProteinID:
XP_053479360
LinkDB
All DBs
Position
4:23484437..23571615
Genome browser
AA seq
2563 aa
AA seq
DB search
MANAATDLDNAEAQRQLNNNNRPSSTGFWESETTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRIGKVLDNAVEAE
KIIQRYEALASDLLEWIEKTISIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKLYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERMGAV
VELAMEMESEGYYDIRRIMARKDNIIKQWDLLKELVTARKTRLEKNLALQKTFQEMVYMI
DWMEEMQMKLLSKDFGKHLLEVEDLLQKHTLQEADITVQAERVQTLNTAALKFTTIDGYQ
PCDPQVICNRVNHVSTCLEELKQLAAKRRSELEDSRELWVFFQEVEESECWMREKIAILN
TQSCGKDLSSVLKLLQKHKSLAGELLARRALLQQTMKKGKQIVTQKRLHTAGINDKLMEV
KEDWKRLEDQAAMRLGHLQEALDFFQFSAEMDDQLAWLQDAYRLVSSDDFGHDEFSTQSL
LKKHVRVRDEVDKHRQNVVALRKHAVVLPLYYGELEEVKERIQEVERVYSEVAEVAVMRQ
QWLNDALAVYRMFSEVNACELWIDEKEKWLKKMAVPERLEDVEVIAHRFESLDQEMNSLM
GRILDVNLIVQQLLDGDHPSSTEVRGCQDHLNSRWNHMVELVEQKKDHLDSVLRIQNYLL
ECSEIKSQIQEKRKAIDSTQYSGSDLGSVLALQRRLSTMEGALAVLEPKLIHLQQEAEDL
ATSEPHKAEEILIPFEGVSVEWDELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWMVQKQ
TEAASNELPESLDEAERLINLHAALNEEIRSYEEDFERLQGVRELLDSEDTLLANAALHQ
WLQKLSAGWNKLLQMWESRRDELVQAHIYHLFMKDVKQAEAFLNNQESSLAHVELPTTVE
TVEAAIKKHKEFSMAMELNLHRIKAVIEAGESLISQNNIYSERIRDRVDLLITRGNQNRE
VAQQWLRKLTDQWELQRFMQDCHELGDWVMEKMLMARDSTFDDTQQLHKKWLKHQTFMAE
LTQNTEWLDKIQKEGERLMSEKPELSSMVQQKLCEIRECWLELENLTQVKALQLFENDRA
QQITQNYTRLNERVQQLELQLTHCDHGHDLTSVNKQLKKLQMMERQMEEWCNEVCDLQLQ
SSSLPKEYVMTDAVSEHQAEVETRIVRLIEPLKERRRILLSSKEVHQVRRDLQDEILWVQ
ERLPLATSQETGSSLQAVQQLMKKNQSLQRELESHQGHVEEVMERASTFSSVRTTEAECV
SALMEDLHHLWGVLWAETERKQLHLDSMYQAQQYYSDITEVEAWLSEQELNMMNEEKGKD
ESSTLQLLKKQLALEQTIEDYAETIGLLSQQCRKLLELGHPDSEQISKRQSQIDRLYVSL
KDLVEERKCRLEQQYWLFQLHREVEELEQWIAEREISASSTELGQDYEHVTILQEKFTEF
ASETGSVGQERVMAVNQMVDELIDYGHADAAVIAEWKDGVNESWAELMELMETRAQMLSA
SHQLHKFFSDCREVITQIADKHRRLPEVRERQDGTTNTSSLQRLMNTFEQDIQLLVGQVR
QLQENAAQLRTVYAGEKAEAIAMQEYEVMQAWKELIMSCEECRVQITTASDKLRFFSVVR
DQLMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARNKSMVQCIEMGKMLLAAR
NPAAEEIKEKLEKVLAKQRELTEKWDKHWEELQHMLEVHQFAQEAVVAESWLSSQEAFLV
SQELGDSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKMKAEQSKLPPTPLLGRK
VFLDPQDSSPARSSPSSLHKQTIYEQGDYWGERNMAQPSPPPGSRRLGSTVSNYTPIVSG
SATSRIQEARNTGVLGIAAGLGMPIERKTTPIKPMRETVRPQIDVNVMAEVVLQEPGCSG
GSRSEMQVEQQRPHVKDLHMERQLSNEQLIQARRDELPQEVWRERAERERRLERQTSSEQ
EVHETRRKERHRLERQESSEHETGREPSDKRSGGGEKRSTLADIVEQLQEREAAQARGEI
PRLPNGLPEKSSRLDRPRARDRPKPRRRPRPKDGAQGETRRSRSAPAQSSSSVPQPPSHH
AQREGFLFRKLDIESQKKSSNRSWVNLYCILNKGELGFFKDSKNTASTYNNEPRLSLSSC
SCDINLGYKKKKNVFTLKTKDGSEFLFHAKDEDDLKGWISSITTSISEHEEIAKWGQSHP
TTSSTDEGTRREGSRAEKSDRADRGSERSDKGEKMEKRSGKKK
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgctgctacggatctggacaatgcagaagcccagagacagttaaacaacaac
aaccggcccagcagcacaggattctgggaaagtgaaaccactagcgctaaactgtttgaa
tgctcacgcattaaggcactagcagatgaaagggatgcggtacagaagaaaaccttcact
aagtgggtgaactctcacctggctcgtgtctcctgtcgcatctctgacctgtataatgat
ctgagagatggttacatgctcaccaggctactggaagtgctttcaggagaactattgccc
cgacctacgagaggcagaatgcgaatacactgtctggagaatgtggataaagccttgcag
ttccttaaagagcagagagttcatctggagaatgttggatctcacgatattgttgatggc
aaccatcgtcttacacttggtctcatctggaccattatccttcgcttccagatccaagtg
attaaaattgagacagaggacaacagggagacacgctcggctaaagatgcactgttactg
tggtgccagatgaaaacagcaggatatcctgaagtgaacatccacaattttaccacatgc
tggagagatggattggctttcaatgcccttattcatcgacacaggcctgatttgatcgaa
tttcacaaactgaccagatcgaatgctacacacaatctgcaacaagctttcaatatcgcc
gagcagaacctcggactcactaaacttcttgatccagaggatgtgaacactgagaatcca
gatgagaagtctattataacatacgttgtgtcctactaccactacttctccaaaatgaaa
gctcttatagtagagggcaaaagaattggaaaggtgttggataacgccgttgaagctgag
aagattattcagcgttatgaagctctggcgtccgatctgctggagtggattgaaaaaacc
attagcatcattagcaaccagaagtttgctaactctctaacaggagtacagcaacagctg
caggccttcacaacctactgcaccattgagaagcctataaagttccaggagaaagggaac
cttgaggtgctgctctttactatccaaagcaaactccgagccaacaaccagaagctatat
gtgcctcatgatggaaagctcatttctgacatcaacaaggcatgggaaaggctagagaag
gcagagcatgaaaggggtgtggctttaaggaaagagctaattcgtcaggagaaactggag
ctacttgctcagcggtttgatcacaaaaccaccatgaggcaggcgtggcttaatgagaac
cagcggcttgtttcccaggacaattttggctatgatctgccagcagtagaggcggcaatg
aagaagcatgaggcgatcgaggctgacatctcgtcatatgaggagcgcatgggtgcggtg
gtggagctggccatggagatggagagtgaaggatattacgacatcagacgtattatggct
aggaaagacaacattataaaacaatgggatctgctgaaagaacttgtgacggctcgaaaa
acacggttggagaaaaacctagcgctacaaaaaaccttccaggagatggtctacatgatc
gactggatggaggagatgcagatgaaactgctctctaaagactttgggaaacacctgctg
gaagtggaggacctgctgcagaaacacactctacaggaggcggacatcaccgtacaggca
gagcgtgtgcaaacactcaacactgctgcgcttaaattcaccaccattgatggataccag
ccatgcgaccctcaggtgatctgcaatcgtgttaatcatgtgagcacttgtctggaggaa
ctgaaacagctagccgctaaacgtcgctccgagctggaggattctcgtgagctctgggtt
ttcttccaggaagtagaagagtctgagtgctggatgcgcgagaagattgcgatcctgaac
acacaaagctgcggtaaagatctgagcagcgtcctaaagctcctgcagaagcacaagagc
ctagctggtgagctgttagctcgacgtgcacttctccagcagactatgaaaaagggaaag
caaattgtcacgcagaaacggttgcacacagctggaataaatgacaagttgatggaggtg
aaggaagattggaaaagactggaggatcaagccgcaatgagacttggccacctgcaggag
gcgctggatttctttcagtttagtgccgaaatggatgatcagctagcatggcttcaagat
gcttacagacttgtctccagtgacgattttggtcacgatgagttttctacgcagtcgctg
ctcaagaagcatgttcgtgttcgtgacgaagtggacaagcaccggcaaaatgttgtagca
ctccgtaaacatgcagtagtactgccactttattatggagagctagaggaagtgaaggag
cggatacaggaagtggagcgtgtgtacagtgaggtagcagaggttgcggtgatgaggcag
cagtggctgaacgatgctcttgctgtctaccgcatgttcagtgaagtgaatgcatgtgaa
ctgtggattgatgagaaggaaaaatggctgaagaaaatggctgttcctgagagacttgag
gatgttgaggtgattgctcacaggtttgagagcctggaccaggagatgaacagcttgatg
ggaaggatcctggatgtgaatcttattgttcagcagctcttggacggtgaccatcccagt
tccactgaggtcagagggtgtcaggatcacttgaacagcaggtggaaccatatggtagag
ctggttgagcagaagaaggatcatttggactctgtccttcgcatccagaattatttactt
gagtgcagtgagattaaatcacagattcaggaaaaacgcaaagccattgattctacgcaa
tattcgggcagtgatctgggaagcgtcttagcgctgcagcggcgtttgtccaccatggag
ggagctctcgctgttctagagcccaaactcatccatttgcagcaggaagcagaagacctt
gcgacctctgagccacacaaagcagaggagatcctgattccctttgagggtgtgagtgtg
gagtgggatgaattgaaacgtacgcttcagggttgtgaggattcactgaccgtagctggc
cggctgcagcagttcattcaggatttggattcttttttgacatggatggtgcagaagcag
acggaggcagcatctaatgagctgcccgagtctttggatgaggctgagaggctcatcaac
cttcacgcagctcttaatgaagaaattcgcagctatgaggaggattttgagaggctgcaa
ggtgtgagggagctgttggactcggaggacactctactagcgaatgctgcactgcaccag
tggctccagaaacttagtgcaggctggaacaagctgctacagatgtgggagagcaggagg
gatgagctagtgcaggcacacatctaccatcttttcatgaaagacgtcaagcaggccgag
gccttcctcaacaaccaggagtcctcattggcacacgtggagctccctaccacagtggag
acggtggaagcagccattaagaaacacaaagagttcagcatggcaatggagctcaatctg
caccggatcaaagctgtgatcgaggcaggagagagtcttatcagccagaacaacatctac
tctgagcgcatccgagatcgtgtggatttactcattaccagggggaatcagaaccgtgaa
gtggcacagcagtggctccgaaaacttaccgatcagtgggaactgcagagattcatgcag
gactgccatgagctgggtgactgggtgatggagaagatgctaatggcacgtgactcaacc
tttgatgacactcagcaactccataagaagtggctgaagcaccaaacgttcatggccgaa
ctcacacagaacacagagtggctcgacaaaattcagaaggaaggtgagcggttgatgtcg
gagaagccagagctgagttccatggttcagcagaaactctgtgagattcgtgagtgttgg
ctggagctggaaaacttgacacaggtcaaagcgctgcagctatttgagaacgaccgtgca
cagcaaatcactcaaaattacactcgcctgaatgagcgtgtgcagcagctggagctgcag
ctaacccactgcgaccacggccacgacctcacctccgtcaacaagcagctcaaaaagctc
cagatgatggagcgacaaatggaggagtggtgtaacgaagtgtgtgatctgcaactgcag
tcctcctctctccccaaggagtatgtgatgacagatgcagtgtctgagcatcaggctgaa
gtggagacgcggatcgtacgtctcatcgagcctttgaaggagagacgaagaatcctgctt
tcctccaaggaggtgcaccaagtgcgccgtgacctgcaggacgaaattctgtgggtgcaa
gagcgccttccactagctacatcacaggaaactgggagtagtttacaggccgtgcagcag
ctcatgaagaaaaatcagagtctgcaaagggaactggagagccaccaggggcatgtggaa
gaggtgatggagcgagcaagtacgttctcatcggtgcgcacgaccgaggcggagtgtgtg
agcgcgttaatggaggatctgcaccacctatggggggtgctgtgggctgagacagagcgt
aaacagcttcacttagactccatgtatcaagctcaacagtactacagcgacattacagag
gtggaggcatggctcagcgaacaggagctgaatatgatgaatgaggagaaaggaaaggat
gaatcgagtactctgcagctgctgaaaaagcagttagctttggagcagacaatcgaggat
tatgctgaaaccatcggacttttatcacaacagtgcagaaaactactggagctcggacat
cctgacagtgaacagatcagtaaacgccagtctcaaatcgaccggctctacgtgtctttg
aaggacttggtggaagagcgtaagtgccggttggaacagcagtactggctctttcagctc
cacagagaggtggaagaactggaacagtggattgctgagcgagagatctcagccagctcc
actgagctcgggcaggattatgaacatgtcacgatcctgcaggagaagttcactgagttt
gcctcagagacaggaagtgtgggtcaggagcgagtaatggctgttaatcagatggtggat
gagttgatcgattatggccatgcagacgctgccgtcattgctgagtggaaggacggagtg
aatgaatcatgggctgaactgatggaactgatggaaaccagagcacaaatgctttctgcg
tcacaccagcttcacaaattcttttctgactgcagagaggtgataacacagatagctgat
aaacacaggagattaccggaagtgcgagagcgccaggatggcacaacaaacactagctca
cttcagagactcatgaacacatttgaacaggatatccagctattggtcgggcaggtgaga
cagttacaggaaaatgccgctcagctccgtactgtttatgcaggggagaaggcagaggcc
attgccatgcaggaatatgaagtgatgcaagcatggaaggagctgatcatgtcctgcgag
gaatgccgtgtgcagattaccacggcatcagataaactgcgatttttcagcgtggtgcgt
gatcagttgatgtggatggaaagcatcatctgccagataggaacgggagagaaacccagg
gatgtttcctctgtcgaggtgctcatgaactaccatcagagcctgaagagcgaagtggaa
gcacgaaataagagcatggtgcagtgtatcgagatgggaaagatgctgctggctgcaaga
aacccagcagcagaggagattaaagagaaactggagaaagttctggcaaaacagagagag
ctgacagagaaatgggataaacactgggaggaactacagcacatgttagaagttcatcag
tttgctcaggaggcagttgtcgctgagtcctggctttcatctcaggaggcattcctggtc
agtcaggaactcggtgacagcgtagacgaagtagagcagctcattcgccgacacgaggcc
ttcaggaaagcagctgcaacctgggaggagagattcagctcattgcgccgcctcactacg
gtggagaagatgaaggcagagcaaagtaagctgcctccaacccctttgctgggtcgtaag
gtttttctggaccctcaggattcgtctccagcacgtagcagcccttcatcacttcacaaa
cagaccatttatgaacagggtgactattggggtgagcgaaacatggctcagccatctcca
ccacctggatctcggagacttggctccacagtctcaaactacacaccaattgttagtgga
tcagccacatcccgaatccaggaggcaagaaacactggtgtcctggggattgctgcaggt
cttggaatgcccatagaacgtaaaaccactccgataaaaccaatgcgcgaaacagtgcgc
ccccaaatagatgtgaatgtaatggcagaggtagtgcttcaggagccgggatgcagtgga
ggcagtcgctctgaaatgcaggtggaacagcaacgtcctcatgtgaaggacttgcatatg
gaacgtcagctttctaatgaacagctgattcaggcgaggagagatgagcttccacaggaa
gtatggagggaaagggcagagagagagaggagactagagagacagacgtccagcgaacag
gaagtacacgaaactcggagaaaagagagacatcgacttgagagacaagaaagcagcgaa
catgagactggcagagaaccatcagataaacgatcaggaggaggagagaaacggtctacc
ttagctgacattgtggaacagcttcaagagagagaagctgcacaggctcgaggagaaatt
cctcgccttccaaacggattgccagagaagtcgtcacggctggaccgaccacgagctcga
gaccgaccaaaaccacgcagacggccacggcccaaagatggcgcacagggtgaaacgcga
cgttcgcgatctgctccagcccagagcagctcatctgtccctcagccaccttcccatcat
gctcagcgtgagggcttcctcttccgcaagttagacatagagagccagaagaaaagctcc
aacagatcttgggtgaatctgtactgcatactgaataaaggcgaacttggtttcttcaag
gactcaaagaacacagcatctacatataacaatgagccacgtctcagtctgagcagctgc
tcctgcgacatcaaccttggctacaagaagaagaaaaacgtcttcacacttaaaactaaa
gatgggagcgagttcctcttccatgctaaagatgaggatgatctgaaaggctggatctcg
agtatcaccacgagtattagcgaacacgaggaaatcgctaaatgggggcagtctcatcca
actacctcatctacagacgagggcacgcggagggaaggcagcagagccgagaaatcagac
agggccgatcggggctccgaacgctcggacaaaggcgagaaaatggagaaaaggagcgga
aaaaagaaatga
DBGET
integrated database retrieval system
