Ictalurus furcatus (blue catfish): 128606878
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Entry
128606878 CDS
T09387
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128606878
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
128606878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF_3
TB
EGF
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
128606878
NCBI-ProteinID:
XP_053479363
LinkDB
All DBs
Position
4:complement(23638172..23725612)
Genome browser
AA seq
1706 aa
AA seq
DB search
MFRTLIVLLCCVSALLHVSPAAERIKVLFTPTICRLRCSNGHCNNYCERGNITTLYSNED
ATHTSGFRVFLCPMLCKNGGVCIQKDRCLCPSNFTGKFCHIPAYSSSASTNEIEKLSSTG
NIPASQALMRSEYVLPLQSRQQNHTIGSPMVTVRVHHPPEATVKIHQVVKVTSSSGSHTA
VRSSGLSGSRGNSGHSSTFLADIADATPALVKAQTFRGDSIYTEASGFKYCFREVRNGQC
SSPLPGLRSQETCCKGDGLAWGIKDCTLCPPISGSGERGCPKGFERVNGTQCVDINECVH
PGFCENGKCVNTRGSYSCVCKPGFLLDASRGICISQKVISEEKDQCFRVVSQGSCSLPIL
KNITKQICCCSRVGKAWGRKCEACPYFGSVEFKEICPAGPGYHYSPNTLKLNQRVAELPN
PALVSQTNRTSTTVTRYDTSLLQSTTRNEPPHNQTPTRPQSATITHNVRIQQSSIGQRQP
TTSEVFIIQSEPLLSQHRQTGRPASSTSQPSKEQPYVIRTQTSRPSVNRHHYSLIPLPVP
STARPPPRGTDKRVCEANPQVCGPGRCVDKPGGRHTCLCNPGFILNSQSGHCQDINECLL
TPRPCLAGQCENTVGSFQCVCPSGYRSNAQQNLCSDIDECRQIPNPCTNGRCENMLGSFR
CVCRTGYKLQNNTCTDTDECDDPLRCPGKECVNTQGSYNCVPCKPGFGLLNSQCSDIDEC
RQRPSLCSNGHCENTPGSYRCVCNNGFKLQGNTCTDVNECEDSLQCPGQGCINTLGSYRC
VSCGPGFAIINRRCTDINECHQVPAPCANGRCENTPGSYRCVCQTGYKLQDNMCTDVNEC
ENHLQCRGQVCVNTPGSYRCTSCGAGFSFHNGQCTDVDECVQNTRLCANGRCENTPGSFR
CVCRPGYRLEANTCTDVDECENELQCPGQKCMNSVGSFKCVSCSPGFEIINGQCQDVDEC
SQTPSPCSNGRCENTPGSFVCVCRSGYKLLGNTCSDVDECESSGICGPMSVCVNMDGSYR
CECLPGFRATGAGRQCRDINECSESEFCFPRGECVNTEGSYKCVCAQGYHTSANGTFCHD
VDECARDGVCEDGHCTNTDGSFMCHCKAGFTANPEKTACLDVDECVDSGGTVCGSQRCEN
TIGSFRCFITCEPGYSLTATGECVDINECANESVCGHHMFCRNLIGTYQCICDQGYETAK
DGRSCVDINECVVMVGVCGAARCWNVEGSFMCECEKRQEEFDPLTRQCLTTGSPSGTGSS
SPLPQPGEQIECYSKVDQRDQCAVLSSNATVQECCCTVGRAWGRKCQHTLCPQAGTSEFQ
AMCPNGRGYVTSAVGAFSYRDVDECKLFDPEVCKGGVCVNNIPGYSCYCPSGYYYDMDLM
ECIDNDECESRDMCPGGLCVNTLGSYYCTCEPPLVLDDTQRSCVNNSDLTVDENVSFCWQ
HVTADLVCQSVLRGIQVTFMECCCLYGEAWGLQCALCPQRDQEQYETLCSTFGPPPNSPR
YAERFASLPGGGGGYRTPYSAPIYPDIPSSDYSDYSAGLSSRRYYEEEDYDPAAAPPFAS
YPRTGRFYGSRFTHTPLTEGAEDQESWRGPAPFPPFTDRRPGSERPQRVYERRYESFAGL
PEDECGILQGCENGRCVRVGEGYTCDCYDGYQLDIASMTCLDVDECEDPTFPECINARCV
NTEGSYRCVCLRGFITSRRPNYCIPA
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggacactgattgtgctgctgtgttgtgtttcggcactgctgcatgtgtctcca
gcggccgagcggattaaagttctgttcacgccaaccatctgcaggctgcgctgctccaac
ggacactgcaacaactactgcgagcgaggcaacattaccacactgtacagcaatgaggat
gcaacacacacgtccggcttcagagtgtttttgtgccccatgttgtgtaaaaatggaggt
gtgtgcattcagaaagatcgatgtctctgtccttccaactttactggaaagttctgccat
attccagcatattcatcttccgcctctaccaacgagattgagaagctgtcctcaactggt
aatataccagccagtcaggcgctgatgcgttcagagtatgtccttcctttacagagtcga
cagcagaaccacaccattgggtctcctatggtgacagttcgagttcatcatcctcctgaa
gcaacggtgaagatccatcaggtggtgaaggtcacttcaagttcaggctcgcacacagcg
gtgcgatcatcagggctctcaggttcccgtggcaacagtggacatagcagcacttttctg
gcagacatagcagatgctacacctgctcttgttaaggctcaaacattcaggggagactct
atctacacagaggcttctgggtttaaatattgcttcagagaagttcgtaacggacagtgc
agttcaccgctgcctgggctccgcagtcaggaaacgtgctgcaagggagatggtttagca
tggggaataaaagattgcacactctgccctccaatatcaggaagtggagagagaggctgt
ccaaaaggctttgagagggttaatggtacacagtgtgtggatattaacgagtgcgtgcat
ccgggtttctgtgagaacgggaagtgtgtgaacacccgtgggagctacagctgtgtttgc
aaacctggtttcttattggacgcctcacgtggcatctgtatctcccagaaggtgatctca
gaggagaaggatcagtgtttccgtgttgtctctcagggctcctgttctttgcccatcctg
aagaacatcaccaagcagatctgctgttgcagtcgtgtcggtaaagcctggggaaggaag
tgtgaggcctgcccctattttggatctgttgaatttaaggagatttgccctgctggtcct
ggctaccattactcacccaacacactaaaattgaatcagagggttgcagaattacccaac
cctgcactggtttctcagacaaatcgcacttcaactacagtgactagatatgatacatca
ttattacaatcaacaacaagaaatgaaccaccacataaccaaacacctacgaggcctcaa
tctgcgactatcacccataatgtcaggattcagcaatccagtattggtcagagacagcca
actacatcagaagttttcatcattcagagtgaaccactgttgagtcaacacagacaaaca
ggaagacctgcttcatcaactagtcagccaagcaaagaacagccctatgttattaggacc
cagacaagcaggccatcggttaacagacaccactattctctaatacctctcccagttccc
tctacggcccgcccacctccacgcggaacagacaagcgtgtgtgtgaggctaaccctcag
gtttgtgggccgggtcggtgtgtcgataagcctggagggaggcacacatgtttgtgtaat
cctgggttcatcctcaattctcaatcaggtcattgccaagatataaatgagtgtttgttg
actccgaggccgtgtttggctggtcagtgtgagaacacagtgggaagttttcagtgtgtg
tgtccttcaggctaccggagtaatgcccagcaaaacctatgctcagatattgatgagtgt
cgtcagatccctaacccttgtactaatgggcgctgtgagaacatgctcggcagcttcagg
tgtgtgtgcaggacaggatacaaactgcagaacaacacctgcacagacactgatgagtgt
gatgacccgctccgctgtccggggaaggagtgcgtaaacactcagggttcctataattgt
gtgccctgcaaacctggatttggtctccttaacagccagtgctcagatattgatgagtgt
cgtcagcgtccttctctttgctctaacggccactgtgagaacacacctggcagctacaga
tgtgtgtgtaataatgggttcaagctacagggtaacacctgcacagatgtgaatgaatgt
gaggactctctgcagtgccctggtcagggatgtattaatactctgggttcatatagatgt
gtgtcatgtggccccgggtttgcaataattaacagaagatgcacagatattaatgagtgt
catcaggttcctgccccctgcgctaacggccgctgtgagaacacacctggcagctacaga
tgtgtgtgtcaaacagggtacaagcttcaggacaacatgtgcacagacgtaaatgagtgt
gagaaccatctgcagtgtcgtggtcaggtgtgtgtgaacactccaggctcgtaccggtgc
acatcctgtggtgctggattcagctttcataatggacagtgcacagatgtggatgagtgt
gtgcagaacacacgcctctgtgctaatggacgctgtgaaaatacccccggaagtttccga
tgtgtatgtcgacctggatacagattggaggcgaacacctgtacagatgtggacgagtgt
gagaatgagcttcagtgcccgggacaaaagtgtatgaactctgttggctctttcaagtgt
gtttcatgcagtccaggcttcgagatcattaatggccaatgtcaagatgtggacgagtgc
agtcagactccatccccatgctctaacggccgatgtgaaaacactcctggaagctttgtg
tgtgtgtgtcgctctggatacaaactgctgggaaacacctgctcagatgttgacgagtgt
gagagctctggaatatgtgggccaatgagtgtgtgtgtgaacatggacggctcatacaga
tgcgagtgtttgcccgggttccgtgctacaggagctggacgccagtgccgagacattaac
gaatgttcggagagtgagttctgcttccctagaggagagtgtgtgaatacagagggctca
tacaagtgtgtgtgcgctcagggttaccacacaagtgccaatgggactttctgtcatgat
gtggatgaatgtgcccgagatggagtgtgtgaggacgggcactgcaccaacactgatggc
tcgtttatgtgtcactgcaaagctggtttcaccgccaatcccgaaaaaacagcctgcctt
gatgtggatgagtgtgtggactctggtgggactgtatgtggttctcagcgctgtgagaac
accatcggatcgtttcgatgctttatcacctgtgaacctggatacagcctcacggctaca
ggagagtgtgtggacattaatgagtgtgcaaacgagagtgtgtgtggccatcacatgttc
tgtcggaatctgattggaacatatcagtgtatctgtgaccaggggtatgagacagcgaaa
gacggacggtcatgtgtggacattaatgagtgtgtagtgatggtgggtgtgtgcggagcg
gcacgctgttggaatgttgaaggttcattcatgtgtgaatgtgagaaacggcaggaagaa
tttgacccacttacacgacagtgtttgaccacagggtcaccatcagggacagggtcatca
tcacctttacctcagccaggagagcaaatagagtgctactctaaagtggatcagagggac
cagtgtgcagttctgtcctccaatgcgactgtacaggagtgctgctgcactgtggggaga
gcctgggggcgcaagtgccaacacactctctgcccacaagctggaacatctgaattccaa
gcaatgtgtccgaacggacgcggctatgtgacttctgcagtgggggccttcagctatagg
gatgtggacgagtgtaaactcttcgacccggaggtgtgtaaaggtggtgtgtgtgtaaac
aacatccctggttactcgtgttactgccccagtggatactactatgacatggacttaatg
gagtgtatagataatgatgagtgtgagagtagggatatgtgtccgggtggtctgtgtgtg
aacacactcggttcatattactgcacttgtgagccgcctctagtgctggatgacacacag
cgctcctgtgtcaacaattcagacctcactgtggatgagaacgtctcattctgttggcag
catgtaacagctgatctggtgtgtcagagtgttttgcgagggattcaagtgacatttatg
gagtgttgctgtttatatggtgaagcatgggggcttcagtgtgctctgtgtccccagaga
gaccaggagcaatatgagacactgtgcagcactttcggtcctcctccaaactctcctcgg
tatgcagagcgttttgcctcactgccaggtggaggagggggttacagaacaccgtacagt
gcccccatttacccagacataccctcgtctgattacagtgactacagtgcaggactcagc
tccaggcgttactatgaggaggaagattatgacccagctgctgctcctccatttgcatca
tatcctcgtactggacgattctacggctcacgctttacccacacccccctcactgaaggt
gctgaagatcaggagtcatggagaggccccgctcctttcccacccttcactgacagaaga
ccaggaagtgaaagaccacagagagtctatgaaaggcggtacgagtcattcgctggtctg
ccagaggatgagtgtggtatactgcagggctgtgaaaatggccgctgtgttcgtgtaggt
gaaggatacacctgtgactgttatgatggatatcagctcgatatcgcctctatgacctgt
ctagatgtggatgagtgtgaggacccaacctttccagagtgtataaatgcacggtgtgta
aacacagaaggttcgtatagatgtgtgtgtctgaggggattcatcacgtcacgcagaccg
aactactgcatacctgcttaa
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