Ictalurus furcatus (blue catfish): 128606910
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Entry
128606910 CDS
T09387
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b
KO
K17936
sorting nexin-27
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128606910 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128606910 (snx27b)
Membrane trafficking [BR:
ifu04131
]
Protein recycling
Others
Others
128606910 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128606910 (snx27b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17-31_F2_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
RA_3
DarA_N
Motif
Other DBs
NCBI-GeneID:
128606910
NCBI-ProteinID:
XP_053479438
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All DBs
Position
1:complement(8818624..8853298)
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AA seq
554 aa
AA seq
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MADVVEGEDVRVPSALRSSRHGSGGNVTAGPRLVRIIKSDSGYGFNVRGQVSEGGQLRSI
NGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHKQVVDLIRAGERELVL
AVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQNGERFVVYNVYMAGR
QLCSKRYREFAILHQNLKKEFATFTFPKLPGKWPFSLSEQQLDARRRGLEEYLERVCSVR
VIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNCTTDQVYQAVVMKVGM
DSITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTLRKWLFTTEEEILL
NDNELAINYCFHQALDDVKRGFIKAEEKSYQLQKLAEQRKVSMYLSMVRSCEGYNEIIFP
HCACDSRRKGHVITAISIRHFKLHACTEEGTLENQVIAFEWGEMQRWDTDEEGMAFCFEY
SRGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKDNKNCSKDEYLPAVEA
QKGWRHLRQEIVTP
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtagtggagggagaggacgtgcgcgtgccctccgcgctgcgctcttcacgg
cacggctccggcgggaacgttactgcgggcccgcggctcgtccgcattatcaagtcagac
tcgggctacggcttcaacgtccgcgggcaagtgagtgaaggtggccagctgcggagcatc
aatggcgaactgtacgcgccgctgcaacatgtcagcgccgtgctaccgggcggtgcggcg
gacagagccgggatctccaagggcgaccgcatcctcgaagtgaatggcgtgaatgtagag
ggagccacacacaaacaggtggtggatctcatccgagctggagaaagggagctagtcctc
gccgtcctctccgtgccccagccagagacggacagcctggacccgggagacgatggctca
tcccagtcctgctacgactacagcgacaagcaggccgtgcccatctctgtgcccacctat
aaacacgtggagcagaacggcgagaggtttgtggtctataatgtgtatatggctggcaga
cagctctgctccaagcgctacagggagtttgccattctgcatcaaaaccttaagaaggag
tttgccacttttacgtttcccaagctgcctgggaagtggcccttctctttgtctgagcaa
cagctggacgcccgaaggaggggactggaggaatacctagaaagagtgtgttctgtgcga
gtgattggtgagagtgatataatgcaggaattcttgtctgaatcagatgagaactataat
ggagtctccgatgtagagttgaggatagccatgccggataaaaccacagtaactgtcaga
gttcgaaagaactgcactacagaccaggtgtaccaggctgtggtgatgaaggttggaatg
gacagtattaccgccagttattttgctctctttgaagtcattaaccactcatttgtgcgg
aaattggctccgaacgagttccctcataagctgtacgtgcagaactacacatcggccgtt
cccggtacctgcctcactctgcgcaagtggctcttcaccactgaggaggagatcctgctg
aacgacaacgagctcgccatcaactactgctttcaccaggcactggatgatgtgaagagg
gggtttattaaagcagaagagaaatcataccagctgcagaaactggctgaacagaggaag
gtttccatgtacctaagtatggtgaggtcatgtgaaggctacaatgagatcatctttcct
cactgtgcttgtgactcacgccgcaaaggccacgttatcacagccattagcatccggcac
ttcaaactgcacgcctgcactgaagagggcactctagagaatcaggtgatagcgttcgag
tggggcgaaatgcagaggtgggacactgacgaggagggaatggctttctgcttcgagtac
tcgcgaggcgagaagaagccgcgctgggtcaaaatcttcactccatattttaactacatg
cacgagtgcttcgagcgggtcttctgtgagctcaaatggcggaaagaggttgaagaggaa
gcgacggataaagacaataagaactgtagtaaagatgaatatcttccagctgttgaggca
cagaagggatggaggcacctgagacaggagattgtcaccccctga
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