Ictalurus furcatus (blue catfish): 128607008
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Entry
128607008 CDS
T09387
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ifu03037
]
128607008
04812 Cytoskeleton proteins [BR:
ifu04812
]
128607008
Cilium and associated proteins [BR:
ifu03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
128607008
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
128607008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
128607008
NCBI-ProteinID:
XP_053479587
LinkDB
All DBs
Position
4:complement(31577878..31625351)
Genome browser
AA seq
795 aa
AA seq
DB search
MKAHKQQERDTKGQFLTPTVNSYKMHSAPVKSLLSEKLIPRPLDIRFPTDLTKTNLDVFR
ANPSRQDCKLGMYGKTLRTPTFVKEFTGPEIALTPPPVTVKRGKAKRVNHNAELTYTHSK
APVLLNTLGDPVAPSDRSAPGFPVSLCCRNDYPFILDRLDLDRRDLIECPNLDGMNKLRV
LNLQHNRLSHLPHLAHLRHLVFLNLYDNRLIDMSAASPLCSLRVLVLGKNRIQRICGLDT
LTNLDVLDLHENQISRIENVSHLAELRVLNLAGNYISRMENLQGLESLIELDLRLNHISS
VTEVDRLPCLQRLFLSSNSISSFDELACLGDSCSLSELTLDGNPVAQESCYKQTVLRCVL
PLRLLDMKRITVRVKEEDRRVANLLARKEDEKKRESHKQAAHKEKRRLAIRNAAQQWEDS
RSFLELPAQNGAKEELSPENSPAHSPGQTNGITQEPSPDDLRRDRGSPLTVPERPAGGND
GKARSSSRPNSPRDPRLQEAGGASVQSLSLSESHVAELDGETVRLFGPGALETLERGWGV
QTASTVTTIAFRYIQFDSIVPTLPRIRLKFPNLTHLIFMETNITRLLQLAALAQVKRLEQ
VTIDPEGNPVVSLALWRAFLIYRLNHLNLQRINGTEVTLNDVMAAERLFGTLGHVASTET
PHCRLLLLLEESRKRQLQFLLEGRVRRFGLSPEELRENGKLLGESMSRALFNYHSKDSSS
ESPEESSSEVSERSSVVDQYLRGLVHTASSTSVKREALHKLWPTMFVEMVRDCVLETRDT
PAYTRACLDTLSDTK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcataaacagcaggaacgcgacaccaaaggacaatttcttacacccacggta
aacagctacaagatgcattcagcaccggtgaaatccctgctctcagagaaactcataccc
aggcctcttgacatacggtttccgacagacctcacgaaaaccaacctggacgttttcaga
gccaatccatcgaggcaagactgcaagttgggcatgtacggtaaaaccctgcgtacccca
acgttcgtgaaagagttcacagggccggagattgctctaacgccccctccagtgaccgtc
aagagggggaaagcaaagcgagtcaaccacaacgcagagctcacctacacacacagcaag
gcccctgtcctcttaaacacactcggtgatccagtggcaccgagtgacagatctgctccg
ggttttcccgtctccctctgctgtaggaatgattatcctttcatcctggacagacttgac
cttgaccgtcgtgacttgattgaatgcccgaacctggacgggatgaataagctccgcgtc
ctcaacctgcaacacaaccggctctctcacctcccacacctggctcacctgcgacacctt
gtcttcctcaatctctacgacaaccgtttgatcgacatgtcggccgcatcacctctctgc
tcccttcgcgtgctcgtgctcggcaagaacagaattcagaggatatgtggtctggacacc
ctgacaaatctcgatgtgctggacttacatgaaaaccagatcagtaggatcgagaacgtt
tctcacctagcagaactcagagttctgaacttggcaggaaactacatctccaggatggag
aacctgcagggcctggaatcattgatcgagctcgacctcagactcaaccacatctcctct
gtaacggaggtggaccgactgccctgtctccagcgtctcttcctcagctctaacagcatc
agcagttttgatgagctggcctgtctgggagactcgtgctctctgagtgagctcaccctg
gatgggaaccctgtagctcaggagtcatgctacaaacagaccgtgctgcgctgcgtgctt
ccactccggctgctggacatgaagcgcatcacagtaagagtgaaagaggaggacagacgc
gtggcaaatcttttagcgcgaaaggaggatgagaagaaacgcgagagccacaaacaagcc
gctcacaaggagaagcggcgactggccatccgtaatgcagcgcagcagtgggaggactcc
aggagctttctcgagcttccagcacagaacggcgccaaggaagagctgagcccagagaac
agccccgcccacagcccaggacagaccaatgggatcactcaggagccgtcacccgatgac
ctcaggcgagatagagggagtcctctcactgttcctgagcgtccagcagggggcaatgac
ggtaaagcgcgctctagcagccgccccaacagcccccgagaccccagactccaggaggca
gggggcgccagcgtgcagagtctgtctctgtctgagagccacgtggccgagctggacggc
gagacggtgcgtctgttcggtccgggggctctggagactctagagagaggctggggggtg
cagacagccagcaccgtcactaccatcgccttccgctatatccagttcgacagcatcgtg
cccactctgccacgcattcgcctcaaattccccaacctcacgcacctgatctttatggag
actaatataacacggctgctgcaattagcagctctagcgcaggtaaagaggctggagcag
gtgaccatcgatccggaaggaaaccccgtagtgagcctggctctgtggcgagccttcctc
atctacagactcaaccacctgaacctgcagagaatcaacggcacggaggtgacactgaac
gacgtcatggcggccgagcgcctttttgggaccctgggtcacgtggcttcgacggaaacg
ccacactgtcgactgcttctgctgctggaggagtctaggaagaggcagctgcagttcttg
ctggagggcagagttcgcaggttcggtttgagccctgaagagctgagggagaacgggaag
ctgttgggggagagcatgagccgcgcactctttaactaccacagcaaggattccagctct
gagagtccagaggagagcagcagcgaggtgtcggagcgcagctccgtggtcgatcagtac
ctgcgaggactcgtgcacacggcgtccagcaccagcgtgaagagagaagcgctgcacaag
ctctggcccaccatgtttgtagagatggtgagggactgcgtgctcgagacgagggacaca
ccagcgtacacgcgcgcctgcctcgacacgctctccgacaccaaatga
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