Ictalurus furcatus (blue catfish): 128607116
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Entry
128607116 CDS
T09387
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128607116 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128607116 (myo5aa)
04131 Membrane trafficking [BR:
ifu04131
]
128607116 (myo5aa)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128607116 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128607116 (myo5aa)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128607116 (myo5aa)
mRNA cycle factors
P-body specific factors
128607116 (myo5aa)
Membrane trafficking [BR:
ifu04131
]
Others
Actin-binding proteins
Myosins
128607116 (myo5aa)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128607116 (myo5aa)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128607116 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
DUF5382
HTH_17
nSTAND3
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
128607116
NCBI-ProteinID:
XP_053479751
LinkDB
All DBs
Position
4:35419844..35477227
Genome browser
AA seq
1885 aa
AA seq
DB search
MSQDLDYMFYKYARVWIPDPEEVWRSAELTKDYKQGDTTLHLQLEDGKDLEHKLDPKTKA
LPHLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLPI
YGTDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKRYHIIGAN
MRTYLLEKSRVVFQADDERNYHIFYQLCASYHLPEFKNLKLSGANEFHYTKQGRNPVIDG
VEDAKEMSTTRNAFTLLGINELYQMGLFQVLAAILHLGNVEVKDRDADSSIIAPNNGHLS
VFCDLLGVAYQDMAHWLCHKKLKTASETYIKPVPRVQAMNSRDALAKHIYAKLFNWIVEH
VNKALHSSVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYM
KEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECRMPRGSDDSWAQKLYNTHLKTCALF
EKPRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVNEEQINVLKASKFDLLVELFQDEDKV
TSPTGSGPPPGGRTRLSIKPDKGKPDQASKEHKKTVGLQFRNSLQLLMETLNATTPHYVR
CIKPNDHKYAFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
QADRKMTCRNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRC
WLERKKYLRMKRAAIVIQRYVRGYQARCLAKFLRRTRAAIVIQKYQRMYVQRTSYRRKRN
AALAMQCILRAYMARQQYKALLREHKAIIIQKMVRGWLARQWYKRSLEAVVYLQCCVRRM
RAKRELKKLKIEARSVEHYKKLNIGMENKIMQLQRRVDEQNKENRVLGERLNNLESAHTT
ESERLRRDLTRLRGVEEEAKNSANRVTTLQEELEKLRKDLQTTQKEKKAIEDWAQTYQDE
MEKMISELKEQNDLLKNEKDDLNRLIQEQSQQWTERMQRALKEETAQLESDLNEERSRYQ
NLLTEHLRLEEKYDDLKEEISLGTNVPKPGHRRTDSTHSSNESEYTYNSEFAESEEGARG
AEDVTKGAALDMALFLKLQKRVTELEQEKQGLQNELDRKEEQFQRARARDDEEHKKARGA
ELEYESLKRQELESENKKLRHNLNEMRQTLAGKDGSMSAYKVLMEQLNSSNEELEVRKEE
VLILRSQLVSQKEAMQHKETMTEPLHYVEDVHKLTDAKEISQAYMGLKDTNRSPRFQRKP
FAVSELVSRLRSPLPDMRKLNEDGELWLVYEGLKETNRLLESQLQAQRRSHEAELEALRG
ELHCVKEENQRQQQLLTQNLQLPPEARIEASLQHEITRLTNENLDCLLENPKSYRINMLR
RIIDLMEQLEKQDKTVRKLKKQLKVFAKKITDLEGGQVENVSPGQMADEPIRPVSIPRRE
KDFQGMLEYKKEDELKLVKNLILELKPRGVAVNMLPGLPAYILFMCLRHADYVNDDQKVR
ALLTSIINSIKKILKKRGDDFETVSFWLANTCRFLHCLKQYSGDEQFMKYNSPKQNDHCL
SNFDLAEYRQVLSDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKPTGLRKRT
SSVADEGTFTLDSIIRQLNSFHGIMCQHGNDPELIKQVVKQQFYIIGAVTLNNLLLRKDM
CSWSKGMQIRYNVSQLEEWLREKNLMVCGAKETLEPLIQAAQLLQVKKKTDEDAEAICSM
CNSLSTAQIVKVLNLYTPVNAFEERVSVTFIRTIQNRLRDRKESPQLLLDTKIIYPVTFP
FNPSSLALDSIQLPSSLNLAFLTRV
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggacttggattatatgttttataaatatgctcgggtgtggatccccgaccct
gaggaagtgtggaggtcagcagagctcactaaagactacaaacagggggacacaacactg
cacctgcagctcgaagatggcaaggatctggagcacaagctggacccgaagactaaagcc
ctgcctcacctgcggaaccccgacatcctggtgggagaaaatgacctgacggcgctgagt
taccttcacgaaccggccgtgttgcacaacctgaaagtgcgcttcatcgactccaaactc
atctacacctactgcggtattgtgttggtggccattaatccgtatgaaacgttgcccatc
tatggcacggatatcattaacgcttacagcggccagaacatgggagacatggacccgcac
atattcgccgtggctgaggaggcctacaagcagatggccagagacgagaggaaccagtcc
atcattgtcagcggagagtctggcgctgggaagacggtttccgccaaatacgccatgcga
tacttcgctacggtgagcggctcagccagcgaggccaacgtcgaggagaaagtacttgcc
tccaaccctatcatggaggccataggaaacgccaaaaccaccaggaacgacaacagcagc
cgctttgggaagtacatcgagatcggcttcgacaagcgctaccacatcatcggcgccaac
atgaggacgtacctgctggagaagtcgcgagtcgtgtttcaggcggacgacgagaggaat
tatcacatcttctaccagctctgtgcctcctaccaccttcctgagttcaagaatctgaaa
ctcagcggtgcaaatgaattccactacaccaaacagggccgaaaccctgtcattgatgga
gtggaggatgcgaaggagatgtcaactaccaggaacgccttcacactgctgggcattaac
gagttgtatcagatggggctgttccaggtcctagcagccatcttgcacctgggaaatgtg
gaggtgaaggacagagacgcagacagcagcatcatagcgcccaataatggtcacctgagc
gtgttctgtgatctgctgggcgtggcctatcaggacatggctcactggctgtgccataag
aagctgaagacggcgtctgagacgtacatcaaaccggttcccagagtgcaggccatgaac
tccagagacgctctggccaaacacatctacgccaaactgttcaactggatcgtggagcac
gtcaacaaggcgctgcactcgtccgtcaaacagcactcgttcatcggcgtgctcgacatc
tacgggtttgaaaccttcgagattaacagttttgaacagttctgtattaactatgctaat
gagaaactccagcagcagtttaacatgcacgtgtttaagctggagcaggaggagtacatg
aaggagcagatcccctggaccctgatcgatttctacgataatcagccgtgcattaatctg
atcgaggctaagatgggcgtgctcgacctgttagacgaggagtgcaggatgccgaggggt
tcagatgactcgtgggctcagaagctctataacactcatctgaagacgtgtgcacttttc
gagaagccgcgcatgtccaataaagccttcatcataaagcactttgcagacaaggtggag
tatcagtgtgagggatttttggagaaaaacaaggacacagtgaatgaagagcagattaat
gttctgaaggccagtaagtttgacctgctggtggagctcttccaggatgaggataaagtt
accagccctacaggaagtggtcctccccccggggggcgcactcgcctgagcatcaaacca
gacaagggcaaaccggaccaggccagcaaggagcacaagaagaccgtgggcctgcagttc
cgtaactctctccagctgctgatggagacgctaaacgccacgacgccacactacgtccgc
tgcatcaaacccaacgaccacaaatacgccttcacgtttgacccgaagcgggcggtgcag
cagctgagggcgtgtggagtcctcgagaccatccgcatctccgctgcaggatttccgtcc
aggtggacctatcaggagttcttcagccgttatcgcgtgttgatgaagcagaaagatgtc
caggctgataggaaaatgacctgcaggaacgttctggagaaactggtgcaggatcaggat
aagtaccagtttgggaagacgaagatctttttccgagcaggtcaggtggcgtacctggag
aaactccgggccgataaactccgagcagcctgcatccgcatccagaaaaccatccgctgc
tggctggagcgcaagaagtacctgcgcatgaaacgagccgccatcgtcatccagagatac
gtccgaggataccaggcccgatgcctggcgaagtttctgcgccgcacccgagccgccatc
gtcatccagaagtaccagcgcatgtacgtacagagaaccagctacaggcgcaaacgcaac
gccgccctcgccatgcagtgtatcctccgagcatacatggcccgacagcagtacaaagcg
ctgctgcgagagcacaaagccatcatcatccagaagatggtgcgcggctggttggcgcgt
cagtggtataagcgctctctggaggcggtggtctacctgcagtgctgcgtgcggcgcatg
agggccaagcgcgagctcaagaagctgaagatcgaagcgcgctccgtcgagcactacaaa
aaactcaacatcggcatggagaacaagatcatgcagcttcagcgcagagtcgacgagcag
aataaggagaaccgggttctgggtgaacgtctgaacaatttggagagcgcccacaccacc
gagagcgagcgtctgcgccgggacctgactcgtttacgcggcgtggaggaggaggcgaag
aacagcgctaaccgagtgaccacgctacaggaggagctggagaaactgcgcaaagatcta
cagaccacgcagaaggagaagaaggccattgaggactgggcgcagacctaccaggacgag
atggagaagatgatctcagagttaaaggaacagaatgatctgttgaagaacgagaaggac
gacctgaaccgtctgatccaggagcagagccaacaatggacagagaggatgcagagggct
ctgaaggaggagacggctcagctggagagcgatttaaacgaggagagatcacgatatcag
aacctcctcaccgagcacctgagactggaggagaaatacgacgacctcaaggaggagatc
tcactcggcacgaacgtccccaaaccgggccacaggagaaccgactccacacacagcagc
aacgagtccgaatacacctacaactccgagttcgccgaatccgaggagggagcgcgagga
gccgaggacgtgaccaaaggagcagcgttggacatggctctgttcctgaagctgcagaag
cgagtgacggagctcgagcaggagaaacagggcctgcagaacgaactggaccgaaaagag
gagcagtttcagcgggctagagccagggacgatgaagagcataagaaggctcgcggcgct
gaactggagtatgaatctcttaagcgtcaggagctggagtcggagaataagaagctgaga
cacaacctgaacgagatgcgtcagactctggcggggaaagacggctccatgtcggcctac
aaggtcctgatggagcagttaaactcctccaacgaggagctggaggtccggaaggaggag
gtgctcatcctgcgctcacaactcgtcagccagaaagaagccatgcagcacaaggagacc
atgaccgagccgctgcactatgtggaggatgttcacaaactcacagatgctaaagagatc
tctcaggcttacatgggcctcaaggataccaacagatcccccaggtttcagcgcaagccg
ttcgcagtgagcgagttggtcagtaggctgagatcccctctccctgacatgcgtaagctg
aatgaggatggagagctgtggctggtgtatgagggcttgaaggagaccaacaggttgttg
gagtctcagctgcaggctcaacggcgctcccatgaggccgagctggaagcgctgcgtggt
gaactgcactgtgtgaaggaggagaaccagagacagcagcagctcctcacacagaacctg
cagcttcctcctgaggctcgcatcgaggccagtctacagcacgagatcacacgcctcacc
aacgagaacctggactgtctacttgagaatccaaagagctacagaatcaacatgctgcgc
aggataattgacctcatggaacagctggagaaacaggacaagacggttcgcaagctgaag
aagcagctcaaagtgttcgccaagaagatcaccgacctggaaggtggtcaggtggagaac
gtgtctccgggtcagatggccgacgagccgatccgtccggtcagcattccacgccgagag
aaagacttccagggaatgttggagtacaagaaggaggacgaactcaagctggtcaagaac
ctcatcctggaattaaagcctcgcggcgtggcagtgaacatgctgcccggtttgcctgcg
tacatcctcttcatgtgtctacgacacgccgactacgtcaacgacgaccagaaagtccga
gcgctgctcacctccatcatcaacagcatcaagaagatcctcaaaaagcgaggtgatgac
tttgagaccgtttcgttctggttggcgaacacatgccgcttcctgcactgtctgaaacag
tacagcggagacgagcaatttatgaagtataacagtccgaagcagaatgatcactgtctg
tccaactttgatctggctgagtatcggcaggttctcagtgatctggccattcagatttac
caacagctcatcaagtgtatggagaatatcctgcagcccatgatcgtctccgggatgcta
gagcacgagaccatccagggtgtgtcaggcgtgaagcccaccggtctgcgcaagaggacg
tccagcgtagctgatgagggaacgttcacgctcgactccatcatccgccagctcaactcc
ttccacggtatcatgtgtcagcatggcaacgaccccgagctcattaagcaggtcgttaag
cagcagttctacatcatcggcgcggtcacactcaacaacctgctgctgcgcaaagatatg
tgctcctggagcaagggcatgcagatcaggtacaatgtgagccagttggaggagtggttg
agggagaagaacctgatggtttgtggtgcgaaggagacgctggagccactgattcaggca
gcgcagttactccaggtcaagaagaagacagatgaggacgctgaggccatctgctccatg
tgtaactcactgagtactgctcagattgtcaaggtgttgaacctgtacactcctgtcaac
gcctttgaagagagagtgtccgtaacgttcatacgaaccatacagaatcgcctgagggat
cgtaaggagtctcctcaactcctcctcgacacaaagatcatctaccccgtgacgttcccc
ttcaacccgtcctccctcgccctggacagcatccagctcccgtccagcctcaacctggca
ttcctcactcgcgtctaa
DBGET
integrated database retrieval system
