Ictalurus furcatus (blue catfish): 128607179
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Entry
128607179 CDS
T09387
Symbol
mc1r
Name
(RefSeq) melanocyte-stimulating hormone receptor
KO
K07375
tubulin beta
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04540
Gap junction
ifu04814
Motor proteins
ifu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128607179 (mc1r)
09144 Cellular community - eukaryotes
04540 Gap junction
128607179 (mc1r)
09142 Cell motility
04814 Motor proteins
128607179 (mc1r)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128607179 (mc1r)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128607179 (mc1r)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128607179 (mc1r)
04147 Exosome [BR:
ifu04147
]
128607179 (mc1r)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128607179 (mc1r)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128607179 (mc1r)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128607179 (mc1r)
Exosomal proteins of colorectal cancer cells
128607179 (mc1r)
Exosomal proteins of bladder cancer cells
128607179 (mc1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
7tm_1
7TM_GPCR_Srsx
7tm_4
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
128607179
NCBI-ProteinID:
XP_053479845
LinkDB
All DBs
Position
4:complement(3038013..3057779)
Genome browser
AA seq
862 aa
AA seq
DB search
MNTMEPSLSMDYMDNVTLNVTPSDTNMTGITQIMIPQELFLMLGLISLVENILVVAAIIK
NRNLHSPMYYFICCLAVSDMLVSVSNVVETMFMLLTDHGLLSVTARMLRHLDNVIDIMIC
SSVVSSLSFLCTIAADRYITIFYALRYHSIMTTQRAITIIAMVWLTSITSSSLFIIYHTD
NAVIACLVTFFGITLVFTAVLYLHMFILAHVHSKRIMALDKNRRQATSMKGAITLTILLG
VFIICWGPFFLHLILILTCPTNPYCKCYFSHFNLFLILIICNSLIDPLIYAYRSQELRKT
LKEIVLCSWCFNLILDPCENCSSVWAWSVGADAAASPRLQPVGFSTASDWPAPAWLSDVT
GHVLNQHRLRFKRPVRAVRVFRRQLAGGDREQRTDIHTHTHTHTHTHTHTLRMREIVHIQ
AGQCGNQIGAKFWEVISDEHGIDPTGNYVGDSDLQLERISVYYNEASSSKYVPRAILVDL
EPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCD
CLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLS
IHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNA
DLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHG
RYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFI
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA
TAEEEGEMYEDDEEESEAQIQK
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatggagcccagcctgagtatggactacatggacaatgtcaccctcaatgtg
actcccagtgacacaaacatgacgggtatcacccagatcatgattcctcaggaactgttc
ctgatgctgggattgataagcctggtggagaacattctggttgttgcagccatcatcaag
aacagaaacctgcattctccgatgtactatttcatctgctgcctcgccgtgtccgacatg
ctggtcagcgtgagcaacgtggtggagacgatgttcatgctgctcacggaccacggcctt
ctgagtgtgacggcaaggatgctgcgccacctggacaacgtcattgacatcatgatctgc
agctctgtggtgtcctcgttgtccttcctgtgcaccatcgcagccgatcgctacatcacc
atcttctacgccttgcgctaccacagcataatgaccacacagcgtgccatcaccatcatt
gcgatggtttggttgaccagcatcacctccagctcgctgtttatcatctaccacactgac
aacgcagtcatcgcctgtctcgtgaccttcttcggcatcacgctggttttcacagccgtg
ctctatctgcacatgttcatcctggcgcacgtgcactccaaacgcatcatggcgctcgat
aaaaaccggcgccaggccaccagcatgaaaggcgccatcacgctgaccatcctgttaggg
gttttcatcatttgctggggtccattcttcctgcatctgatcctaatcctgacgtgtcca
acaaacccttattgcaagtgctacttcagccatttcaacctcttcttaatcctcattata
tgcaactctctcatagaccctttgatttacgcgtatcggagtcaagaactgcgaaagacg
cttaaggaaatagttttgtgctcttggtgctttaatctgatattagatccttgtgaaaac
tgctcttcggtgtgggcgtggtcagttggtgctgatgctgccgcctcgccccggttgcag
ccggtcggtttctccacagcctctgattggccagcgcctgcctggctcagtgacgtcacc
ggacatgtgttaaatcagcatcgtctgcgctttaaaaggccggtccgagctgtgcgagtt
ttccgccggcaacttgcaggaggagacagagaacagcgcacagatatacacacacacaca
catacacatacacacacacacacacacaccctgaggatgagagagattgtccacatccaa
gccggccagtgcggcaaccagatcggagccaagttctgggaggtgatcagtgatgaacat
ggcatcgaccccactggaaactacgtgggtgactcagacctccagctggagaggatcagc
gtttactacaatgaagcttcctcctccaaatatgttcccagagccatcctggtggatctg
gagccaggcaccatggatagtgtacgatctggagcctttggccatctcttcagacctgat
aacttcatttttggtcagagtggagcaggcaacaactgggctaaaggccactacacagaa
ggagcagagctagtggactccgtcctggacgtggtgcggaaggaatgcgagaactgcgac
tgcctccaaggtttccagctcacccactcactcggagggggcacgggctcgggcatgggc
acgctgctgatcagcaaagtgagagaagaatatcccgaccgcatcatgaacaccttcagc
gtggtcccttcccctaaagtgtccgacacagtggtggagccctacaacgccacgctttcc
atccaccagctggttgagaacacagatgagacgtactgcattgacaacgaagccctatac
gacatttgcttccgcacactcaagctggccacgcccacttacggtgacctcaaccacctg
gtctcggctaccatgagtggagtcacgacctcgctgcgcttcccaggccagctgaacgct
gacctgcgcaagctggctgtcaacatggtacccttccctcgcctgcacttcttcatgccc
ggattcgctcctttgacagcacgtggaagccaacagtaccgcgctcttactgtccctgag
ctcacacagcagatgtttgacgccaaaaacatgatggccgcatgcgacccacgtcacggc
cgctatctcactgtggccaccgtcttccgaggacgcatgtccatgaaggaagtggatgag
cagatgctggccatccaaagcaagaacagcagctattttgtcgaatggatccccaacaac
gtgaaggttgctgtgtgcgacattccaccccgggggctcaagatgtcctccacgttcatc
ggcaacagcacggccatccaggagctcttcaagcgcatctccgagcagttcacagccatg
ttcaggcgtaaggctttcttgcactggtacactggcgaaggcatggatgagatggagttc
accgaggctgaaagcaacatgaacgacctggtgtctgagtaccagcagtaccaggacgcc
acggctgaggaagagggagagatgtatgaggatgacgaggaggagtcagaggcccagatt
caaaagtaa
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