KEGG   Ictalurus furcatus (blue catfish): 128607315
Entry
128607315         CDS       T09387                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128607315 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ifu03041]
    128607315 (sf3a1)
Spliceosome [BR:ifu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    128607315 (sf3a1)
 Complex B
    128607315 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    128607315 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 128607315
NCBI-ProteinID: XP_053480021
LinkDB
Position
5:complement(795238..804015)
AA seq 798 aa
MPPVQISQPEANNKADEQKEESPATKSIVGIIYPPPEVRNIVDKTASFVARNGPEFEARI
RQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQQSLQQAQQQLPQ
KVQAQVIHETVVPKEPPPEFEFMADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLQKLKREAENPREVLDQVRYRVEWA
KYQERERRKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILI
QERYEKYGESEEVEMEVESEDEEDERENRNEGHATQLDQDTQLQDMDEGSDEDEDSMKAP
LPPENPMPPPLPPTPDQVIIRKDYDPKASKPQAVMPPGDEFLISPITGERIPASKMQEHM
RIGLLDPRWLEQRDRNLRERQIEEEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDENKDKIGPSK
PNETGLPPLPTSVPTLPKPSPPITTAPRMPPAKMLEVSGCVSWQVPPPLRTTLLSAMPVI
PRPPMAPVVRLTPGQVLTPMPPMVHAPRINVVQMPPTTPHIMAPRPPPMVVPAAFVPAPP
VPQPPSSAPAPMPPTHPPAPHDDEPVNKKMKTEDNLIQEDEFLRRNKGPVAVKVQVPNMQ
DKTEWKLNGQVLSFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNM
NNGSVIHLALKERGGRKK
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgccgccggtacagatctctcagcccgaggccaacaacaaggccgatgagcagaaggaa
gaatctccggccactaagtccatcgtggggatcatatatcctcctcctgaagtgcgcaac
atcgtggacaagaccgccagcttcgtagcgaggaacgggcctgagtttgaagcgaggatt
cgtcagaacgagatcaacaaccccaagtttaacttcctgaaccccaatgacccgtaccat
gcctactaccgccacaaggtcaacgagttcaaagagggcaaaggtcaggagccatcggcc
gccgtgcctaaggtcatgcagcagcagtccttgcagcaggcgcagcagcagctcccgcag
aaggtccaggcgcaggtcatccatgagacggtcgtccccaaggagcctccgcccgagttc
gagttcatggccgacccgccctccatctcggccttcgacctggacgtggtgaagctgacg
gctcagttcgtggcgcgtaacggccgccagttcctcacgcagctcatgcagaaggagcag
aggaactaccagttcgacttcctgcgccctcagcacagcctcttcaactacttcaccaaa
ctggtggagcagtacaccaagattctgatccccccgaaaggactgctgcagaaactgaag
cgggaggcggagaatccccgcgaggtcctggatcaggtgaggtacagagtggagtgggcc
aagtaccaggagcgagagaggaggaaagaggaggaggagcgagagaaagagcgtgtggcg
tacgctcagatcgactggcatgacttcgtcgtcgtggagacggtcgacttccagcccaac
gagcaagggaacttccctccccccaccactcctgaggaactgggagctcgaatcctgatc
caggagcgctacgagaagtacggagagagtgaggaggtggagatggaggtggagagcgag
gacgaggaggacgagcgagagaacagaaacgaaggacacgcaactcagctggatcaggac
acgcagctgcaggacatggacgagggttcggatgaagatgaggattcgatgaaggctcca
cttcctcctgaaaaccctatgcctcctcctctgcctccaactccagaccaggtcatcatc
cgcaaagactacgaccccaaggcctctaagcctcaggctgtgatgcctcccggtgacgag
ttcctcatctccccgatcacgggtgagaggatcccggccagtaagatgcaggagcacatg
cgtatcgggctgctggacccgcgctggctggagcagcgagaccgcaacctccgagaacga
cagatcgaagaggaggtgtacgctcccggcctggacatcgagagcagcctgaagcagctg
gccgagagaagaacggatatcttcggtgtggaagaaaccgccatcgggaaaaagatcgga
gaggaggagatccagaaacccgaggagaaggtgacgtgggacggtcactcgggcagcatg
gcgcgtacgcagcaggccgctcaggccaacatcacgctgcaggagcagatcgaagccatc
cacaaagctaaaggcctggtgcaggaggacgagaacaaggacaagatcggacccagcaaa
cccaatgagaccgggttgccaccactgcccacctccgtgcccaccctgcccaagcccagc
ccacccatcaccacggctcccagaatgccacctgcaaaaatgttggaagtcagtggatgt
gtgtcgtggcaggttcctcctccgctgcgcaccaccttgctctccgccatgcccgttatc
ccgaggccccccatggcccccgtggtgcgcttgacccccggtcaggtcctgaccccaatg
cctcccatggtgcacgctcctcgcatcaacgtggtgcagatgcccccgaccacaccccac
atcatggctcctcgacctccacccatggtggtgcctgcagcattcgtacctgcccctcca
gtgccccagccacccagttctgcccccgcccccatgccacccacccaccctcctgcccca
catgatgacgagccggtgaacaagaagatgaagaccgaggacaacctgatccaggaggac
gagttcctgcgcagaaacaagggtcccgtggcggtcaaggttcaggttcccaacatgcag
gacaagaccgaatggaagctgaacggacaagtgctgagcttcaccctgcctctcacagac
caggtgtcagtgataaaggttaagatccacgaggccaccgggatgccggccggcaaacag
aaacttcagtacgagggaatcttcattaaggactccaactctctggcgtattacaacatg
aacaacggatctgttattcatctggcactgaaggagagaggagggaggaagaagtag

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